RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 LIG1P18858 919 aa7.19□□□□□ -1.26
SCN2A-202ENST00000375427 JAKMIP3Q5VZ66 844 aa7.19□□□□□ -1.26
SCN2A-202ENST00000375427 HMGB3O15347 200 aaKnown RBP7.19□□□□□ -1.26
SCN2A-202ENST00000375427 TTLL5Q6EMB2 1281 aa7.19□□□□□ -1.26
SCN2A-202ENST00000375427 PLEKHD1A6NEE1 506 aa7.19□□□□□ -1.26
SCN2A-202ENST00000375427 GMNNO75496 209 aa7.19□□□□□ -1.26
SCN2A-202ENST00000375427 BICD1Q96G01 975 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 RAB3IL1Q8TBN0 382 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 CCDC97Q96F63 343 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 HOOK1Q9UJC3 728 aaKnown RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 RRP9O43818 475 aaKnown RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 STMN1P16949 149 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 ZFYVE1Q9HBF4 777 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 GTF2A1P52655 376 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 CALCOCO1Q9P1Z2 691 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 NOL3O60936 208 aaKnown RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 ZFYP08048 801 aaPredicted RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 CCDC144CPQ8IYA2 1237 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 RBM33Q96EV2 1170 aaKnown RBP7.18□□□□□ -1.26
SCN2A-202ENST00000375427 ERLIN1O75477 346 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
SCN2A-202ENST00000375427 RNF8O76064 485 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 DBN1Q16643 649 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 SKOR2Q2VWA4 1001 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-202ENST00000375427 GIMAP4Q9NUV9 329 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 WHAMMQ8TF30 809 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 PPFIA2O75334 1257 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 EIF4G2P78344 907 aaKnown RBP eCLIP7.17□□□□□ -1.26
SCN2A-202ENST00000375427 BTN2A1Q7KYR7 527 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 PCMTD1Q96MG8 357 aaPredicted RBP7.17□□□□□ -1.26
SCN2A-202ENST00000375427 ZNF853P0CG23 659 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 ATP6V1DQ9Y5K8 247 aa7.17□□□□□ -1.26
SCN2A-202ENST00000375427 TRIM6-TRIM34B2RNG4 842 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 LIMCH1Q9UPQ0 1083 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 SLMAPQ14BN4 828 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 CCDC158Q5M9N0 1113 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 PIK3R5Q8WYR1 880 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 ARID4AP29374 1257 aaPredicted RBP7.16□□□□□ -1.26
SCN2A-202ENST00000375427 PRKG1Q13976 671 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 POLE3Q9NRF9 147 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 CHMP4CQ96CF2 233 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 PPP1R9BQ96SB3 815 aa7.16□□□□□ -1.26
SCN2A-202ENST00000375427 RGS3P49796 1198 aa7.15□□□□□ -1.26
SCN2A-202ENST00000375427 IRX6P78412 446 aaPredicted RBP7.15□□□□□ -1.26
SCN2A-202ENST00000375427 SPRYD3Q8NCJ5 442 aa7.15□□□□□ -1.26
SCN2A-202ENST00000375427 RNF20Q5VTR2 975 aa7.15□□□□□ -1.26
SCN2A-202ENST00000375427 SYCP1Q15431 976 aa7.15□□□□□ -1.26
SCN2A-202ENST00000375427 SH2D4BQ5SQS7 431 aa7.15□□□□□ -1.26
SCN2A-202ENST00000375427 SF3A1Q15459 793 aaKnown RBP7.15□□□□□ -1.27
SCN2A-202ENST00000375427 TCEAL9Q9UHQ7 104 aa7.15□□□□□ -1.27
SCN2A-202ENST00000375427 SATB2Q9UPW6 733 aa7.15□□□□□ -1.27
SCN2A-202ENST00000375427 TAX1BP1Q86VP1 789 aa7.15□□□□□ -1.27
SCN2A-202ENST00000375427 APLFQ8IW19 511 aaPredicted RBP7.15□□□□□ -1.27
SCN2A-202ENST00000375427 CEP83Q9Y592 693 aa7.15□□□□□ -1.27
SCN2A-202ENST00000375427 SREK1Q8WXA9 508 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 CCDC39Q9UFE4 941 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 MAP2K1Q02750 393 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 RTF1Q92541 710 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 IQCGQ9H095 443 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 BBXQ8WY36 941 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 SKIDA1Q1XH10 827 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 CCDC50Q8IVM0 306 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 PDCD7Q8N8D1 485 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 CCDC160A6NGH7 325 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 RFC1P35251 1148 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 ZFYVE27Q5T4F4 411 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 TERF1P54274 439 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 CAVIN1Q6NZI2 390 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 BCL2L13Q9BXK5 485 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 FAM114A2Q9NRY5 505 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 SMC2O95347 1197 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 GBP7Q8N8V2 638 aaPredicted RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 CCDC47Q96A33 483 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 IFT57Q9NWB7 429 aa7.14□□□□□ -1.27
SCN2A-202ENST00000375427 SCAF1Q9H7N4 1312 aaKnown RBP7.14□□□□□ -1.27
SCN2A-202ENST00000375427 MARCH6O60337 910 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 UIMC1Q96RL1 719 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 IQCEQ6IPM2 695 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 CEP120Q8N960 986 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 LRRCC1Q9C099 1032 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 MRS2Q9HD23 443 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 MCM6Q14566 821 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 C6orf163Q5TEZ5 329 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 ALS2CR12Q96Q35 445 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 OPA1O60313 960 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 DNAJC21Q5F1R6 531 aaKnown RBP7.13□□□□□ -1.27
SCN2A-202ENST00000375427 DHX37Q8IY37 1157 aaKnown RBP7.13□□□□□ -1.27
SCN2A-202ENST00000375427 VPS53Q5VIR6 699 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 TXLNBQ8N3L3 684 aa7.13□□□□□ -1.27
SCN2A-202ENST00000375427 EPS15P42566 896 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 MNAT1P51948 309 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 MAP9Q49MG5 647 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 POTEB3A0JP26 581 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 POTEBQ6S5H4 581 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
SCN2A-202ENST00000375427 STMN2Q93045 179 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 TRIM34Q9BYJ4 488 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
SCN2A-202ENST00000375427 GOLGA4Q13439 2230 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms