RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
SRPK1-204ENST00000373825 KIF21BO75037 1637 aa18.83■□□□□ 0.61
SRPK1-204ENST00000373825 TSPY26PQ9H489 355 aa18.83■□□□□ 0.61
SRPK1-204ENST00000373825 C8orf34Q49A92 452 aa18.83■□□□□ 0.6
SRPK1-204ENST00000373825 IRX3P78415 501 aaPredicted RBP18.83■□□□□ 0.6
SRPK1-204ENST00000373825 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
SRPK1-204ENST00000373825 TPD52L1Q16890 204 aaPredicted RBP18.82■□□□□ 0.6
SRPK1-204ENST00000373825 CCDC94Q9BW85 323 aaPredicted RBP18.82■□□□□ 0.6
SRPK1-204ENST00000373825 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
SRPK1-204ENST00000373825 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
SRPK1-204ENST00000373825 NBPF8Q3BBV2 869 aa18.8■□□□□ 0.6
SRPK1-204ENST00000373825 HOMER1Q86YM7 354 aa18.79■□□□□ 0.6
SRPK1-204ENST00000373825 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
SRPK1-204ENST00000373825 BRD4O60885 1362 aaPredicted RBP18.79■□□□□ 0.6
SRPK1-204ENST00000373825 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SRPK1-204ENST00000373825 GPATCH11Q8N954 259 aa18.79■□□□□ 0.6
SRPK1-204ENST00000373825 CCDC112Q8NEF3 446 aa18.79■□□□□ 0.6
SRPK1-204ENST00000373825 GOLGA6L19H0YKK7 550 aa18.78■□□□□ 0.6
SRPK1-204ENST00000373825 NOM1Q5C9Z4 860 aaKnown RBP18.78■□□□□ 0.6
SRPK1-204ENST00000373825 ZNF830Q96NB3 372 aaPredicted RBP18.78■□□□□ 0.6
SRPK1-204ENST00000373825 RBM25P49756 843 aaKnown RBP18.78■□□□□ 0.6
SRPK1-204ENST00000373825 GORABQ5T7V8 394 aa18.77■□□□□ 0.6
SRPK1-204ENST00000373825 BECN2A8MW95 431 aa18.77■□□□□ 0.59
SRPK1-204ENST00000373825 TSC1Q92574 1164 aa18.77■□□□□ 0.59
SRPK1-204ENST00000373825 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.59
SRPK1-204ENST00000373825 SETQ01105 290 aaPredicted RBP18.76■□□□□ 0.59
SRPK1-204ENST00000373825 DZIP1LQ8IYY4 767 aaKnown RBP18.76■□□□□ 0.59
SRPK1-204ENST00000373825 SEC24BO95487 1268 aa18.76■□□□□ 0.59
SRPK1-204ENST00000373825 TIGD1Q96MW7 591 aa18.76■□□□□ 0.59
SRPK1-204ENST00000373825 ELL2O00472 640 aaPredicted RBP18.76■□□□□ 0.59
SRPK1-204ENST00000373825 PATL2C9JE40 543 aaKnown RBP18.75■□□□□ 0.59
SRPK1-204ENST00000373825 MBD3O95983 291 aa18.75■□□□□ 0.59
SRPK1-204ENST00000373825 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
SRPK1-204ENST00000373825 K7ELQ4 463 aaPredicted RBP18.75■□□□□ 0.59
SRPK1-204ENST00000373825 CWC15Q9P013 229 aaKnown RBP18.74■□□□□ 0.59
SRPK1-204ENST00000373825 SMARCA2P51531 1590 aa18.74■□□□□ 0.59
SRPK1-204ENST00000373825 GTF2F1P35269 517 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRPK1-204ENST00000373825 ZFP91Q96JP5 570 aaPredicted RBP18.73■□□□□ 0.59
SRPK1-204ENST00000373825 TRIM5Q9C035 493 aa18.73■□□□□ 0.59
SRPK1-204ENST00000373825 MNS1Q8NEH6 495 aa18.73■□□□□ 0.59
SRPK1-204ENST00000373825 FBXW7Q969H0 707 aa18.73■□□□□ 0.59
SRPK1-204ENST00000373825 CIZ1Q9ULV3 898 aaPredicted RBP18.73■□□□□ 0.59
SRPK1-204ENST00000373825 TRIM34Q9BYJ4 488 aa18.73■□□□□ 0.59
SRPK1-204ENST00000373825 RRBP1Q9P2E9 1410 aaKnown RBP18.72■□□□□ 0.59
SRPK1-204ENST00000373825 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
SRPK1-204ENST00000373825 ARGLU1Q9NWB6 273 aaPredicted RBP18.72■□□□□ 0.59
SRPK1-204ENST00000373825 KIF20AO95235 890 aa18.72■□□□□ 0.59
SRPK1-204ENST00000373825 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
SRPK1-204ENST00000373825 TNNT1P13805 278 aa18.71■□□□□ 0.59
SRPK1-204ENST00000373825 USP25Q9UHP3 1055 aa18.71■□□□□ 0.59
SRPK1-204ENST00000373825 ZKSCAN5Q9Y2L8 839 aa18.71■□□□□ 0.59
SRPK1-204ENST00000373825 CERS3Q8IU89 383 aa18.7■□□□□ 0.58
SRPK1-204ENST00000373825 DNAJC2Q99543 621 aaKnown RBP18.7■□□□□ 0.58
SRPK1-204ENST00000373825 IGHDP01880 384 aa18.69■□□□□ 0.58
SRPK1-204ENST00000373825 OS9Q13438 667 aaPredicted RBP18.69■□□□□ 0.58
SRPK1-204ENST00000373825 TBC1D32Q96NH3 1257 aa18.69■□□□□ 0.58
SRPK1-204ENST00000373825 IPO4Q8TEX9 1081 aaKnown RBP18.69■□□□□ 0.58
SRPK1-204ENST00000373825 CCDC27Q2M243 656 aa18.68■□□□□ 0.58
SRPK1-204ENST00000373825 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
SRPK1-204ENST00000373825 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
SRPK1-204ENST00000373825 POLR3GO15318 223 aaPredicted RBP18.68■□□□□ 0.58
SRPK1-204ENST00000373825 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
SRPK1-204ENST00000373825 DEF6Q9H4E7 631 aa18.67■□□□□ 0.58
SRPK1-204ENST00000373825 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
SRPK1-204ENST00000373825 FIBPO43427 364 aa18.67■□□□□ 0.58
SRPK1-204ENST00000373825 C16orf45Q96MC5 204 aaPredicted RBP18.66■□□□□ 0.58
SRPK1-204ENST00000373825 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
SRPK1-204ENST00000373825 PDE3AQ14432 1141 aa18.66■□□□□ 0.58
SRPK1-204ENST00000373825 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
SRPK1-204ENST00000373825 NEK4P51957 841 aa18.66■□□□□ 0.58
SRPK1-204ENST00000373825 TOMM22Q9NS69 142 aa18.65■□□□□ 0.58
SRPK1-204ENST00000373825 ATP6V1DQ9Y5K8 247 aa18.65■□□□□ 0.58
SRPK1-204ENST00000373825 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
SRPK1-204ENST00000373825 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
SRPK1-204ENST00000373825 REC8O95072 547 aa18.64■□□□□ 0.57
SRPK1-204ENST00000373825 PRIMPOLQ96LW4 560 aa18.64■□□□□ 0.57
SRPK1-204ENST00000373825 NUP155O75694 1391 aa18.64■□□□□ 0.57
SRPK1-204ENST00000373825 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.577e-7■■■□□ 18.5
SRPK1-204ENST00000373825 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
SRPK1-204ENST00000373825 BAG4O95429 457 aaKnown RBP18.63■□□□□ 0.57
SRPK1-204ENST00000373825 LEKR1Q6ZMV7 388 aa18.63■□□□□ 0.57
SRPK1-204ENST00000373825 ANO2Q9NQ90 1003 aa18.63■□□□□ 0.57
SRPK1-204ENST00000373825 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
SRPK1-204ENST00000373825 MCM5P33992 734 aa18.63■□□□□ 0.57
SRPK1-204ENST00000373825 NOLC1Q14978 699 aaKnown RBP eCLIP18.63■□□□□ 0.571e-5■□□□□ 10.6
SRPK1-204ENST00000373825 ZSCAN23Q3MJ62 389 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 TSPYL1Q9H0U9 437 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 TPM3P06753 285 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 PRIM1P49642 420 aaKnown RBP18.62■□□□□ 0.57
SRPK1-204ENST00000373825 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
SRPK1-204ENST00000373825 H0YHG0 523 aa18.61■□□□□ 0.57
SRPK1-204ENST00000373825 GTF2A1P52655 376 aaPredicted RBP18.61■□□□□ 0.57
SRPK1-204ENST00000373825 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
SRPK1-204ENST00000373825 SMARCA4P51532 1647 aa18.61■□□□□ 0.57
SRPK1-204ENST00000373825 CDC45O75419 566 aa18.6■□□□□ 0.57
SRPK1-204ENST00000373825 TPM4P67936 248 aa18.6■□□□□ 0.57
SRPK1-204ENST00000373825 TMX1Q9H3N1 280 aa18.6■□□□□ 0.57
SRPK1-204ENST00000373825 HSP90B2PQ58FF3 399 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms