RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 HFM1A2PYH4 1435 aa25.14■■□□□ 1.62
LCN2-203ENST00000373017 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
LCN2-203ENST00000373017 CHD2O14647 1828 aaKnown RBP25.13■■□□□ 1.61
LCN2-203ENST00000373017 TOM1O60784 492 aa25.12■■□□□ 1.61
LCN2-203ENST00000373017 PIP4K2BP78356 416 aa25.12■■□□□ 1.61
LCN2-203ENST00000373017 PLEKHG1Q9ULL1 1385 aa25.11■■□□□ 1.61
LCN2-203ENST00000373017 CLTCL1P53675 1640 aa25.11■■□□□ 1.61
LCN2-203ENST00000373017 CHGAP10645 457 aaKnown RBP25.1■■□□□ 1.61
LCN2-203ENST00000373017 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
LCN2-203ENST00000373017 TRPM2O94759 1503 aa25.07■■□□□ 1.6
LCN2-203ENST00000373017 KCNA6P17658 529 aa25.06■■□□□ 1.6
LCN2-203ENST00000373017 HSPA1LP34931 641 aa25.06■■□□□ 1.6
LCN2-203ENST00000373017 NUTM2DQ5VT03 806 aaPredicted RBP25.06■■□□□ 1.6
LCN2-203ENST00000373017 ADAMTS13Q76LX8 1427 aa25.04■■□□□ 1.6
LCN2-203ENST00000373017 KIF1BO60333 1816 aa25.04■■□□□ 1.6
LCN2-203ENST00000373017 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
LCN2-203ENST00000373017 NKTRP30414 1462 aaKnown RBP25.03■■□□□ 1.6
LCN2-203ENST00000373017 PPP1R15AO75807 674 aaPredicted RBP25.03■■□□□ 1.6
LCN2-203ENST00000373017 TMEM94Q12767 1356 aa25.03■■□□□ 1.6
LCN2-203ENST00000373017 BCANQ96GW7 911 aa25.02■■□□□ 1.6
LCN2-203ENST00000373017 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
LCN2-203ENST00000373017 DISP3Q9P2K9 1392 aa25.01■■□□□ 1.59
LCN2-203ENST00000373017 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
LCN2-203ENST00000373017 HDGFP51858 240 aaKnown RBP24.99■■□□□ 1.59
LCN2-203ENST00000373017 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.99■■□□□ 1.59
LCN2-203ENST00000373017 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
LCN2-203ENST00000373017 TRIM52Q96A61 297 aa24.97■■□□□ 1.59
LCN2-203ENST00000373017 PROSER2Q86WR7 435 aaPredicted RBP24.96■■□□□ 1.59
LCN2-203ENST00000373017 TBX22Q9Y458 520 aa24.96■■□□□ 1.59
LCN2-203ENST00000373017 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
LCN2-203ENST00000373017 PTPRUQ92729 1446 aa24.92■■□□□ 1.58
LCN2-203ENST00000373017 ROBO1Q9Y6N7 1651 aa24.91■■□□□ 1.58
LCN2-203ENST00000373017 ILDR2Q71H61 639 aa24.91■■□□□ 1.58
LCN2-203ENST00000373017 SLC4A1APQ9BWU0 796 aaKnown RBP24.91■■□□□ 1.58
LCN2-203ENST00000373017 MED1Q15648 1581 aaPredicted RBP24.91■■□□□ 1.58
LCN2-203ENST00000373017 XRN1Q8IZH2 1706 aaKnown RBP24.91■■□□□ 1.58
LCN2-203ENST00000373017 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
LCN2-203ENST00000373017 PPLO60437 1756 aa24.88■■□□□ 1.57
LCN2-203ENST00000373017 SETD1AO15047 1707 aaKnown RBP24.88■■□□□ 1.57
LCN2-203ENST00000373017 PIK3R4Q99570 1358 aa24.88■■□□□ 1.57
LCN2-203ENST00000373017 FOXD1Q16676 465 aa24.87■■□□□ 1.57
LCN2-203ENST00000373017 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
LCN2-203ENST00000373017 FAM135BQ49AJ0 1406 aa24.86■■□□□ 1.57
LCN2-203ENST00000373017 MSH6P52701 1360 aa24.84■■□□□ 1.57
LCN2-203ENST00000373017 METP08581 1390 aa24.82■■□□□ 1.56
LCN2-203ENST00000373017 AMOTL2Q9Y2J4 779 aa24.81■■□□□ 1.56
LCN2-203ENST00000373017 NCOA3Q9Y6Q9 1424 aa24.8■■□□□ 1.56
LCN2-203ENST00000373017 IFT172Q9UG01 1749 aa24.8■■□□□ 1.56
LCN2-203ENST00000373017 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
LCN2-203ENST00000373017 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
LCN2-203ENST00000373017 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
LCN2-203ENST00000373017 NALCNQ8IZF0 1738 aa24.75■■□□□ 1.55
LCN2-203ENST00000373017 SLAIN2Q9P270 581 aa24.74■■□□□ 1.55
LCN2-203ENST00000373017 SPATA31E1Q6ZUB1 1445 aa24.73■■□□□ 1.55
LCN2-203ENST00000373017 CCDC144AA2RUR9 1427 aa24.72■■□□□ 1.55
LCN2-203ENST00000373017 RAB3GAP2Q9H2M9 1393 aa24.72■■□□□ 1.55
LCN2-203ENST00000373017 C14orf37Q86TY3 774 aa24.71■■□□□ 1.55
LCN2-203ENST00000373017 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
LCN2-203ENST00000373017 C19orf44Q9H6X5 657 aa24.7■■□□□ 1.54
LCN2-203ENST00000373017 COL16A1Q07092 1604 aaPredicted RBP24.7■■□□□ 1.54
LCN2-203ENST00000373017 VGFO15240 615 aaPredicted RBP24.69■■□□□ 1.54
LCN2-203ENST00000373017 DCCP43146 1447 aa24.65■■□□□ 1.54
LCN2-203ENST00000373017 CADPS2Q86UW7 1296 aa24.65■■□□□ 1.54
LCN2-203ENST00000373017 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.54
LCN2-203ENST00000373017 ADGRF5Q8IZF2 1346 aa24.63■■□□□ 1.53
LCN2-203ENST00000373017 ADGRL3Q9HAR2 1447 aa24.63■■□□□ 1.53
LCN2-203ENST00000373017 ATF3P18847 181 aa24.63■■□□□ 1.53
LCN2-203ENST00000373017 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
LCN2-203ENST00000373017 MST1RQ04912 1400 aa24.62■■□□□ 1.53
LCN2-203ENST00000373017 PTCH1Q13635 1447 aa24.62■■□□□ 1.53
LCN2-203ENST00000373017 PRAG1Q86YV5 1406 aa24.62■■□□□ 1.53
LCN2-203ENST00000373017 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
LCN2-203ENST00000373017 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
LCN2-203ENST00000373017 SOCS7O14512 581 aa24.6■■□□□ 1.53
LCN2-203ENST00000373017 NHSL1Q5SYE7 1610 aa24.6■■□□□ 1.53
LCN2-203ENST00000373017 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
LCN2-203ENST00000373017 BRINP3Q76B58 766 aa24.57■■□□□ 1.52
LCN2-203ENST00000373017 PIK3C2GO75747 1445 aa24.57■■□□□ 1.52
LCN2-203ENST00000373017 ANKRD30BQ9BXX2 1392 aa24.56■■□□□ 1.52
LCN2-203ENST00000373017 PHF23Q9BUL5 403 aaPredicted RBP24.56■■□□□ 1.52
LCN2-203ENST00000373017 RGS17Q9UGC6 210 aaPredicted RBP24.56■■□□□ 1.52
LCN2-203ENST00000373017 SHPRHQ149N8 1683 aa24.56■■□□□ 1.52
LCN2-203ENST00000373017 KNDC1Q76NI1 1749 aa24.55■■□□□ 1.52
LCN2-203ENST00000373017 JCADQ9P266 1359 aa24.54■■□□□ 1.52
LCN2-203ENST00000373017 NRXN1Q9ULB1 1477 aa24.51■■□□□ 1.51
LCN2-203ENST00000373017 LRP6O75581 1613 aa24.5■■□□□ 1.51
LCN2-203ENST00000373017 TECPR2O15040 1411 aa24.5■■□□□ 1.51
LCN2-203ENST00000373017 MYOM2P54296 1465 aa24.5■■□□□ 1.51
LCN2-203ENST00000373017 C1orf167Q5SNV9 1468 aa24.49■■□□□ 1.51
LCN2-203ENST00000373017 LAMC1P11047 1609 aa24.48■■□□□ 1.51
LCN2-203ENST00000373017 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
LCN2-203ENST00000373017 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
LCN2-203ENST00000373017 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
LCN2-203ENST00000373017 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
LCN2-203ENST00000373017 HRCP23327 699 aa24.45■■□□□ 1.5
LCN2-203ENST00000373017 STK26Q9P289 416 aa24.44■■□□□ 1.5
LCN2-203ENST00000373017 PLEKHH1Q9ULM0 1364 aa24.43■■□□□ 1.5
LCN2-203ENST00000373017 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
LCN2-203ENST00000373017 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
LCN2-203ENST00000373017 WAPLQ7Z5K2 1190 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms