RNA–Protein interactions for RNA: ENST00000372925.6

MACF1-205, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 14,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-205ENST00000372925 VPS53Q5VIR6 699 aa7.12□□□□□ -1.27
MACF1-205ENST00000372925 TRDNQ13061 729 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 WASHC2AQ641Q2 1341 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 FRAT2O75474 233 aaPredicted RBP7.11□□□□□ -1.27
MACF1-205ENST00000372925 DDX58O95786 925 aaKnown RBP7.11□□□□□ -1.27
MACF1-205ENST00000372925 HSP90B2PQ58FF3 399 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 RUFY1Q96T51 708 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 C1orf141Q5JVX7 400 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 PES1O00541 588 aaKnown RBP7.11□□□□□ -1.27
MACF1-205ENST00000372925 ERC2O15083 957 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 MEX3CQ5U5Q3 659 aaKnown RBP7.11□□□□□ -1.27
MACF1-205ENST00000372925 INTS3Q68E01 1043 aaKnown RBP7.11□□□□□ -1.27
MACF1-205ENST00000372925 TXLNBQ8N3L3 684 aa7.11□□□□□ -1.27
MACF1-205ENST00000372925 NINLQ9Y2I6 1382 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 CCDC173Q0VFZ6 552 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 API5Q9BZZ5 524 aaKnown RBP7.1□□□□□ -1.27
MACF1-205ENST00000372925 HMGB2P26583 209 aaKnown RBP7.1□□□□□ -1.27
MACF1-205ENST00000372925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.1□□□□□ -1.278e-7■■■■■ 76.8
MACF1-205ENST00000372925 WASHC2CQ9Y4E1 1318 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 GGT6Q6P531 493 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 CCAR2Q8N163 923 aaKnown RBP7.1□□□□□ -1.27
MACF1-205ENST00000372925 COG3Q96JB2 828 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.1□□□□□ -1.27
MACF1-205ENST00000372925 WIZO95785 1651 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 ERICH2A1L162 156 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 ZNF771Q7L3S4 317 aaPredicted RBP7.1□□□□□ -1.27
MACF1-205ENST00000372925 BRMS1Q9HCU9 246 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 SAFBQ15424 915 aaKnown RBP eCLIP7.1□□□□□ -1.27
MACF1-205ENST00000372925 CHMP5Q9NZZ3 219 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 SMARCA4P51532 1647 aa7.1□□□□□ -1.27
MACF1-205ENST00000372925 APBB1O00213 710 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 XBP1P17861 261 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 CPLX1O14810 134 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 HMGN5P82970 282 aaKnown RBP7.09□□□□□ -1.27
MACF1-205ENST00000372925 PDCP20941 246 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 STK26Q9P289 416 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 HIP1O00291 1037 aa7.09□□□□□ -1.27
MACF1-205ENST00000372925 NGDNQ8NEJ9 315 aaKnown RBP7.09□□□□□ -1.27
MACF1-205ENST00000372925 RRP1P56182 461 aaKnown RBP7.09□□□□□ -1.27
MACF1-205ENST00000372925 PIP4K2AP48426 406 aaPredicted RBP7.09□□□□□ -1.28
MACF1-205ENST00000372925 SLC4A10Q6U841 1118 aa7.09□□□□□ -1.28
MACF1-205ENST00000372925 GTF2E1P29083 439 aaPredicted RBP7.08□□□□□ -1.28
MACF1-205ENST00000372925 PSMA5P28066 241 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 CAVIN1Q6NZI2 390 aaKnown RBP7.08□□□□□ -1.28
MACF1-205ENST00000372925 TRIM34Q9BYJ4 488 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 USP47Q96K76 1375 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 KIF21BO75037 1637 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 CCDC66A2RUB6 948 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 ZRSR2Q15696 482 aaKnown RBP7.08□□□□□ -1.28
MACF1-205ENST00000372925 SASS6Q6UVJ0 657 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 DHX16O60231 1041 aaKnown RBP7.08□□□□□ -1.28
MACF1-205ENST00000372925 CCDC7Q96M83 1385 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 CNTLNQ9NXG0 1405 aa7.08□□□□□ -1.28
MACF1-205ENST00000372925 CAGE1Q8TC20 777 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 C9orf78Q9NZ63 289 aaPredicted RBP7.07□□□□□ -1.28
MACF1-205ENST00000372925 ANKRD45Q5TZF3 282 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 MYOM3Q5VTT5 1437 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 MBD3O95983 291 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 FAM43AQ8N2R8 423 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 HOMER1Q86YM7 354 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 CCDC39Q9UFE4 941 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 TTC5Q8N0Z6 440 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 RRBP1Q9P2E9 1410 aaKnown RBP7.07□□□□□ -1.28
MACF1-205ENST00000372925 SOX12O15370 315 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 LUC7LQ9NQ29 371 aaKnown RBP7.07□□□□□ -1.28
MACF1-205ENST00000372925 PDE4AP27815 886 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 CCDC73Q6ZRK6 1079 aa7.07□□□□□ -1.28
MACF1-205ENST00000372925 CCDC191Q8NCU4 936 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 CT47B1P0C2W7 299 aaPredicted RBP7.06□□□□□ -1.28
MACF1-205ENST00000372925 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 MROH2BQ7Z745 1585 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 SAFB2Q14151 953 aaKnown RBP eCLIP7.06□□□□□ -1.286e-7■■□□□ 14.3
MACF1-205ENST00000372925 L3MBTL2Q969R5 705 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 IFIT2P09913 472 aaKnown RBP7.06□□□□□ -1.28
MACF1-205ENST00000372925 OLFM4Q6UX06 510 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 TEFQ10587 303 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 KIF3BO15066 747 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 MRE11P49959 708 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 IL27Q8NEV9 243 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 RILPL2Q969X0 211 aa7.06□□□□□ -1.28
MACF1-205ENST00000372925 GNAI1P63096 354 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 EPS15P42566 896 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 ZNF330Q9Y3S2 320 aaPredicted RBP7.05□□□□□ -1.28
MACF1-205ENST00000372925 SART3Q15020 963 aaKnown RBP7.05□□□□□ -1.28
MACF1-205ENST00000372925 MCTP1Q6DN14 999 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 ODF2Q5BJF6 829 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 DZIP1LQ8IYY4 767 aaKnown RBP7.05□□□□□ -1.28
MACF1-205ENST00000372925 SMARCE1Q969G3 411 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 CCDC43Q96MW1 224 aaKnown RBP7.05□□□□□ -1.28
MACF1-205ENST00000372925 TSHZ2Q9NRE2 1034 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 CTDP1Q9Y5B0 961 aaPredicted RBP7.05□□□□□ -1.28
MACF1-205ENST00000372925 VPS37DQ86XT2 251 aa7.05□□□□□ -1.28
MACF1-205ENST00000372925 G3BP1Q13283 466 aaKnown RBP eCLIP7.04□□□□□ -1.281e-6■■□□□ 14.5
MACF1-205ENST00000372925 TAF3Q5VWG9 929 aa7.04□□□□□ -1.28
MACF1-205ENST00000372925 MNS1Q8NEH6 495 aa7.04□□□□□ -1.28
MACF1-205ENST00000372925 SEPT11Q9NVA2 429 aaKnown RBP7.04□□□□□ -1.28
MACF1-205ENST00000372925 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
MACF1-205ENST00000372925 PANK3Q9H999 370 aa7.04□□□□□ -1.28
MACF1-205ENST00000372925 SMC3Q9UQE7 1217 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms