RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
EXOSC1-204ENST00000370902 IQGAP3Q86VI3 1631 aa17.35■□□□□ 0.37
EXOSC1-204ENST00000370902 KCNA6P17658 529 aa17.34■□□□□ 0.37
EXOSC1-204ENST00000370902 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
EXOSC1-204ENST00000370902 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
EXOSC1-204ENST00000370902 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
EXOSC1-204ENST00000370902 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
EXOSC1-204ENST00000370902 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
EXOSC1-204ENST00000370902 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
EXOSC1-204ENST00000370902 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
EXOSC1-204ENST00000370902 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
EXOSC1-204ENST00000370902 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
EXOSC1-204ENST00000370902 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
EXOSC1-204ENST00000370902 SLC52A1Q9NWF4 448 aa17.29■□□□□ 0.36
EXOSC1-204ENST00000370902 APLP2Q06481 763 aa17.28■□□□□ 0.36
EXOSC1-204ENST00000370902 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
EXOSC1-204ENST00000370902 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
EXOSC1-204ENST00000370902 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.35
EXOSC1-204ENST00000370902 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
EXOSC1-204ENST00000370902 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
EXOSC1-204ENST00000370902 PROSER2Q86WR7 435 aaPredicted RBP17.24■□□□□ 0.35
EXOSC1-204ENST00000370902 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
EXOSC1-204ENST00000370902 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
EXOSC1-204ENST00000370902 LRP6O75581 1613 aa17.23■□□□□ 0.35
EXOSC1-204ENST00000370902 POTEAQ6S8J7 498 aa17.23■□□□□ 0.35
EXOSC1-204ENST00000370902 SPHKAPQ2M3C7 1700 aa17.23■□□□□ 0.35
EXOSC1-204ENST00000370902 MSH6P52701 1360 aa17.22■□□□□ 0.35
EXOSC1-204ENST00000370902 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
EXOSC1-204ENST00000370902 PTPRUQ92729 1446 aa17.21■□□□□ 0.34
EXOSC1-204ENST00000370902 NCOA3Q9Y6Q9 1424 aa17.21■□□□□ 0.34
EXOSC1-204ENST00000370902 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
EXOSC1-204ENST00000370902 TRPM2O94759 1503 aa17.19■□□□□ 0.34
EXOSC1-204ENST00000370902 TBX22Q9Y458 520 aa17.18■□□□□ 0.34
EXOSC1-204ENST00000370902 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
EXOSC1-204ENST00000370902 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
EXOSC1-204ENST00000370902 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
EXOSC1-204ENST00000370902 JCADQ9P266 1359 aa17.15■□□□□ 0.34
EXOSC1-204ENST00000370902 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
EXOSC1-204ENST00000370902 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
EXOSC1-204ENST00000370902 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
EXOSC1-204ENST00000370902 NUTM2DQ5VT03 806 aaPredicted RBP17.13■□□□□ 0.33
EXOSC1-204ENST00000370902 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
EXOSC1-204ENST00000370902 NUP155O75694 1391 aa17.11■□□□□ 0.33
EXOSC1-204ENST00000370902 DCCP43146 1447 aa17.11■□□□□ 0.33
EXOSC1-204ENST00000370902 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
EXOSC1-204ENST00000370902 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
EXOSC1-204ENST00000370902 BCANQ96GW7 911 aa17.1■□□□□ 0.33
EXOSC1-204ENST00000370902 MST1RQ04912 1400 aa17.09■□□□□ 0.33
EXOSC1-204ENST00000370902 CHGAP10645 457 aaKnown RBP17.08■□□□□ 0.32
EXOSC1-204ENST00000370902 LAMC1P11047 1609 aa17.07■□□□□ 0.32
EXOSC1-204ENST00000370902 METP08581 1390 aa17.06■□□□□ 0.32
EXOSC1-204ENST00000370902 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
EXOSC1-204ENST00000370902 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
EXOSC1-204ENST00000370902 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
EXOSC1-204ENST00000370902 KIF1BO60333 1816 aa17.05■□□□□ 0.32
EXOSC1-204ENST00000370902 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
EXOSC1-204ENST00000370902 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
EXOSC1-204ENST00000370902 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
EXOSC1-204ENST00000370902 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
EXOSC1-204ENST00000370902 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
EXOSC1-204ENST00000370902 ADGRL3Q9HAR2 1447 aa17.03■□□□□ 0.32
EXOSC1-204ENST00000370902 NAIPQ13075 1403 aa17.02■□□□□ 0.31
EXOSC1-204ENST00000370902 PRAG1Q86YV5 1406 aa17.01■□□□□ 0.31
EXOSC1-204ENST00000370902 PPLO60437 1756 aa17■□□□□ 0.31
EXOSC1-204ENST00000370902 ATF3P18847 181 aa16.99■□□□□ 0.31
EXOSC1-204ENST00000370902 ITGAEP38570 1179 aa16.99■□□□□ 0.31
EXOSC1-204ENST00000370902 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
EXOSC1-204ENST00000370902 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
EXOSC1-204ENST00000370902 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
EXOSC1-204ENST00000370902 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
EXOSC1-204ENST00000370902 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
EXOSC1-204ENST00000370902 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
EXOSC1-204ENST00000370902 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
EXOSC1-204ENST00000370902 COL22A1Q8NFW1 1626 aaPredicted RBP16.93■□□□□ 0.3
EXOSC1-204ENST00000370902 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
EXOSC1-204ENST00000370902 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
EXOSC1-204ENST00000370902 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
EXOSC1-204ENST00000370902 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
EXOSC1-204ENST00000370902 RGS12O14924 1447 aa16.92■□□□□ 0.3
EXOSC1-204ENST00000370902 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
EXOSC1-204ENST00000370902 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
EXOSC1-204ENST00000370902 AFF2P51816 1311 aa16.9■□□□□ 0.3
EXOSC1-204ENST00000370902 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
EXOSC1-204ENST00000370902 MEX3CQ5U5Q3 659 aaKnown RBP16.89■□□□□ 0.29
EXOSC1-204ENST00000370902 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
EXOSC1-204ENST00000370902 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 EP400Q96L91 3159 aa16.87■□□□□ 0.29
EXOSC1-204ENST00000370902 PXDNQ92626 1479 aa16.85■□□□□ 0.29
EXOSC1-204ENST00000370902 SRCAPQ6ZRS2 3230 aa16.84■□□□□ 0.29
EXOSC1-204ENST00000370902 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
EXOSC1-204ENST00000370902 SOS2Q07890 1332 aaPredicted RBP16.84■□□□□ 0.29
EXOSC1-204ENST00000370902 RXRBP28702 533 aa16.83■□□□□ 0.28
EXOSC1-204ENST00000370902 MYOM2P54296 1465 aa16.83■□□□□ 0.28
EXOSC1-204ENST00000370902 TECPR2O15040 1411 aa16.82■□□□□ 0.28
EXOSC1-204ENST00000370902 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
EXOSC1-204ENST00000370902 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms