RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
COPA-202ENST00000368069 STK31Q9BXU1 1019 aa14.63□□□□□ -0.07
COPA-202ENST00000368069 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
COPA-202ENST00000368069 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
COPA-202ENST00000368069 SLC4A10Q6U841 1118 aa14.62□□□□□ -0.07
COPA-202ENST00000368069 ERBINQ96RT1 1412 aa14.62□□□□□ -0.07
COPA-202ENST00000368069 NUTM2FA1L443 756 aa14.62□□□□□ -0.07
COPA-202ENST00000368069 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
COPA-202ENST00000368069 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
COPA-202ENST00000368069 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
COPA-202ENST00000368069 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
COPA-202ENST00000368069 FGD1P98174 961 aa14.61□□□□□ -0.07
COPA-202ENST00000368069 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
COPA-202ENST00000368069 HMMRO75330 724 aa14.61□□□□□ -0.07
COPA-202ENST00000368069 RIPK4P57078 832 aa14.61□□□□□ -0.07
COPA-202ENST00000368069 ZRSR1Q15695 479 aaKnown RBP14.61□□□□□ -0.07
COPA-202ENST00000368069 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
COPA-202ENST00000368069 RPRD2Q5VT52 1461 aaKnown RBP14.6□□□□□ -0.07
COPA-202ENST00000368069 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
COPA-202ENST00000368069 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
COPA-202ENST00000368069 ARHGEF11O15085 1522 aa14.59□□□□□ -0.07
COPA-202ENST00000368069 MTHFSP49914 203 aa14.59□□□□□ -0.07
COPA-202ENST00000368069 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.07
COPA-202ENST00000368069 PLEKHH2Q8IVE3 1493 aa14.58□□□□□ -0.08
COPA-202ENST00000368069 KIAA1211Q6ZU35 1233 aa14.58□□□□□ -0.08
COPA-202ENST00000368069 COG3Q96JB2 828 aa14.58□□□□□ -0.08
COPA-202ENST00000368069 GGNBP2Q9H3C7 697 aa14.58□□□□□ -0.08
COPA-202ENST00000368069 CABP2Q9NPB3 220 aa14.58□□□□□ -0.08
COPA-202ENST00000368069 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
COPA-202ENST00000368069 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
COPA-202ENST00000368069 GOLGA6L4A6NEF3 574 aa14.56□□□□□ -0.08
COPA-202ENST00000368069 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
COPA-202ENST00000368069 NGDNQ8NEJ9 315 aaKnown RBP14.56□□□□□ -0.08
COPA-202ENST00000368069 NAP1L2Q9ULW6 460 aaPredicted RBP14.56□□□□□ -0.08
COPA-202ENST00000368069 AMPHP49418 695 aa14.56□□□□□ -0.08
COPA-202ENST00000368069 MAGI1Q96QZ7 1491 aaPredicted RBP14.56□□□□□ -0.08
COPA-202ENST00000368069 BCAR3O75815 825 aa14.56□□□□□ -0.08
COPA-202ENST00000368069 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
COPA-202ENST00000368069 MSH5O43196 834 aa14.55□□□□□ -0.08
COPA-202ENST00000368069 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
COPA-202ENST00000368069 CCDC141Q6ZP82 1450 aa14.54□□□□□ -0.08
COPA-202ENST00000368069 THOC2Q8NI27 1593 aaKnown RBP14.54□□□□□ -0.08
COPA-202ENST00000368069 NOL8Q76FK4 1167 aaKnown RBP14.54□□□□□ -0.08
COPA-202ENST00000368069 AAMPQ13685 434 aa14.53□□□□□ -0.08
COPA-202ENST00000368069 LTV1Q96GA3 475 aaPredicted RBP14.53□□□□□ -0.08
COPA-202ENST00000368069 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
COPA-202ENST00000368069 UGGT2Q9NYU1 1516 aa14.53□□□□□ -0.08
COPA-202ENST00000368069 GRIN2AQ12879 1464 aa14.53□□□□□ -0.08
COPA-202ENST00000368069 KIF16BQ96L93 1317 aa14.53□□□□□ -0.08
COPA-202ENST00000368069 ST18O60284 1047 aa14.52□□□□□ -0.08
COPA-202ENST00000368069 EID1Q9Y6B2 187 aa14.52□□□□□ -0.09
COPA-202ENST00000368069 LNPKQ9C0E8 428 aa14.51□□□□□ -0.09
COPA-202ENST00000368069 SCAPERQ9BY12 1400 aa14.51□□□□□ -0.09
COPA-202ENST00000368069 HMOX1P09601 288 aa14.51□□□□□ -0.09
COPA-202ENST00000368069 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
COPA-202ENST00000368069 API5Q9BZZ5 524 aaKnown RBP14.5□□□□□ -0.09
COPA-202ENST00000368069 C22orf23Q9BZE7 217 aa14.5□□□□□ -0.09
COPA-202ENST00000368069 CHMP5Q9NZZ3 219 aa14.5□□□□□ -0.09
COPA-202ENST00000368069 CFAP43Q8NDM7 1665 aa14.49□□□□□ -0.09
COPA-202ENST00000368069 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
COPA-202ENST00000368069 FOXD4L5Q5VV16 416 aaPredicted RBP14.49□□□□□ -0.09
COPA-202ENST00000368069 FOXD4L4Q8WXT5 416 aaPredicted RBP14.49□□□□□ -0.09
COPA-202ENST00000368069 KIF14Q15058 1648 aa14.49□□□□□ -0.09
COPA-202ENST00000368069 SYAP1Q96A49 352 aaPredicted RBP14.48□□□□□ -0.09
COPA-202ENST00000368069 CHMP4AQ9BY43 222 aa14.48□□□□□ -0.09
COPA-202ENST00000368069 PDZRN3Q9UPQ7 1066 aa14.48□□□□□ -0.09
COPA-202ENST00000368069 EXOSC9Q06265 439 aaKnown RBP14.48□□□□□ -0.09
COPA-202ENST00000368069 ZNF608Q9ULD9 1512 aaPredicted RBP14.47□□□□□ -0.09
COPA-202ENST00000368069 GNAI1P63096 354 aa14.47□□□□□ -0.09
COPA-202ENST00000368069 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
COPA-202ENST00000368069 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
COPA-202ENST00000368069 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
COPA-202ENST00000368069 TSR2Q969E8 191 aaKnown RBP14.46□□□□□ -0.09
COPA-202ENST00000368069 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
COPA-202ENST00000368069 SLFN5Q08AF3 891 aa14.45□□□□□ -0.1
COPA-202ENST00000368069 CTTNBP2Q8WZ74 1663 aa14.45□□□□□ -0.1
COPA-202ENST00000368069 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
COPA-202ENST00000368069 DRC7Q8IY82 874 aa14.44□□□□□ -0.1
COPA-202ENST00000368069 GPATCH3Q96I76 525 aa14.44□□□□□ -0.1
COPA-202ENST00000368069 GPATCH8Q9UKJ3 1502 aaKnown RBP14.44□□□□□ -0.1
COPA-202ENST00000368069 CHAF1AQ13111 956 aaPredicted RBP14.44□□□□□ -0.1
COPA-202ENST00000368069 SKOR2Q2VWA4 1001 aaPredicted RBP14.44□□□□□ -0.1
COPA-202ENST00000368069 SKAP1Q86WV1 359 aa14.44□□□□□ -0.1
COPA-202ENST00000368069 GOLGA6L6A8MZA4 724 aa14.44□□□□□ -0.1
COPA-202ENST00000368069 FRAT2O75474 233 aaPredicted RBP14.44□□□□□ -0.1
COPA-202ENST00000368069 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
COPA-202ENST00000368069 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 PRKAR2BP31323 418 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 HDAC5Q9UQL6 1122 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 WDR63Q8IWG1 891 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 NINLQ9Y2I6 1382 aa14.42□□□□□ -0.1
COPA-202ENST00000368069 REC8O95072 547 aa14.41□□□□□ -0.1
COPA-202ENST00000368069 TCOF1Q13428 1488 aaKnown RBP14.41□□□□□ -0.1
COPA-202ENST00000368069 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
COPA-202ENST00000368069 NECTIN2Q92692 538 aa14.41□□□□□ -0.1
COPA-202ENST00000368069 NOB1Q9ULX3 412 aaKnown RBP14.4□□□□□ -0.1
COPA-202ENST00000368069 DISP3Q9P2K9 1392 aa14.4□□□□□ -0.1
COPA-202ENST00000368069 NSD3Q9BZ95 1437 aa14.4□□□□□ -0.1
COPA-202ENST00000368069 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms