RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RSPH6AQ9H0K4 717 aa25.48■■□□□ 1.67
TRIM58-201ENST00000366481 AMER1Q5JTC6 1135 aaPredicted RBP25.46■■□□□ 1.67
TRIM58-201ENST00000366481 E9PCH4 1651 aa25.45■■□□□ 1.66
TRIM58-201ENST00000366481 APAF1O14727 1248 aa25.44■■□□□ 1.66
TRIM58-201ENST00000366481 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
TRIM58-201ENST00000366481 NEUROD2Q15784 382 aa25.44■■□□□ 1.66
TRIM58-201ENST00000366481 FAM161AQ3B820 660 aa25.43■■□□□ 1.66
TRIM58-201ENST00000366481 PRDM15P57071 1507 aaPredicted RBP25.41■■□□□ 1.66
TRIM58-201ENST00000366481 DUSP27Q5VZP5 1158 aa25.41■■□□□ 1.66
TRIM58-201ENST00000366481 CHD1O14646 1710 aa25.4■■□□□ 1.66
TRIM58-201ENST00000366481 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
TRIM58-201ENST00000366481 PLCH2O75038 1416 aa25.39■■□□□ 1.66
TRIM58-201ENST00000366481 SLKQ9H2G2 1235 aaPredicted RBP25.39■■□□□ 1.65
TRIM58-201ENST00000366481 GOLGA2Q08379 1002 aa25.39■■□□□ 1.65
TRIM58-201ENST00000366481 FAM43AQ8N2R8 423 aa25.39■■□□□ 1.65
TRIM58-201ENST00000366481 DMRT2Q9Y5R5 561 aa25.39■■□□□ 1.65
TRIM58-201ENST00000366481 ADGRF5Q8IZF2 1346 aa25.38■■□□□ 1.65
TRIM58-201ENST00000366481 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
TRIM58-201ENST00000366481 BCAR3O75815 825 aa25.37■■□□□ 1.65
TRIM58-201ENST00000366481 WDR7Q9Y4E6 1490 aa25.37■■□□□ 1.65
TRIM58-201ENST00000366481 BLMP54132 1417 aaPredicted RBP25.36■■□□□ 1.65
TRIM58-201ENST00000366481 UNC13BO14795 1591 aa25.36■■□□□ 1.65
TRIM58-201ENST00000366481 ABCC2Q92887 1545 aa25.36■■□□□ 1.65
TRIM58-201ENST00000366481 RRP7AQ9Y3A4 280 aaKnown RBP25.35■■□□□ 1.65
TRIM58-201ENST00000366481 CENPQQ7L2Z9 268 aaPredicted RBP25.35■■□□□ 1.65
TRIM58-201ENST00000366481 SCAPERQ9BY12 1400 aa25.34■■□□□ 1.65
TRIM58-201ENST00000366481 NPM1P06748 294 aaKnown RBP eCLIP25.34■■□□□ 1.65
TRIM58-201ENST00000366481 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
TRIM58-201ENST00000366481 POGKQ9P215 609 aa25.33■■□□□ 1.64
TRIM58-201ENST00000366481 MYO5CQ9NQX4 1742 aa25.32■■□□□ 1.64
TRIM58-201ENST00000366481 NAP1L5Q96NT1 182 aaPredicted RBP25.32■■□□□ 1.64
TRIM58-201ENST00000366481 CARD14Q9BXL6 1004 aa25.32■■□□□ 1.64
TRIM58-201ENST00000366481 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
TRIM58-201ENST00000366481 TMEM132EQ6IEE7 984 aa25.31■■□□□ 1.64
TRIM58-201ENST00000366481 GLIPR1L2Q4G1C9 344 aa25.3■■□□□ 1.64
TRIM58-201ENST00000366481 UGGT1Q9NYU2 1555 aa25.3■■□□□ 1.64
TRIM58-201ENST00000366481 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
TRIM58-201ENST00000366481 CDCA8Q53HL2 280 aa25.29■■□□□ 1.64
TRIM58-201ENST00000366481 ATP10AO60312 1499 aa25.29■■□□□ 1.64
TRIM58-201ENST00000366481 GGT6Q6P531 493 aa25.28■■□□□ 1.64
TRIM58-201ENST00000366481 C8orf34Q49A92 452 aa25.28■■□□□ 1.64
TRIM58-201ENST00000366481 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.27■■□□□ 1.64
TRIM58-201ENST00000366481 SAFB2Q14151 953 aaKnown RBP eCLIP25.27■■□□□ 1.645e-7■■■■□ 19.5
TRIM58-201ENST00000366481 SLFN5Q08AF3 891 aa25.25■■□□□ 1.63
TRIM58-201ENST00000366481 SCAF11Q99590 1463 aaKnown RBP25.24■■□□□ 1.63
TRIM58-201ENST00000366481 SLC12A5Q9H2X9 1139 aa25.24■■□□□ 1.63
TRIM58-201ENST00000366481 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
TRIM58-201ENST00000366481 GZF1Q9H116 711 aaPredicted RBP25.24■■□□□ 1.63
TRIM58-201ENST00000366481 PLXNC1O60486 1568 aa25.23■■□□□ 1.63
TRIM58-201ENST00000366481 SPRYD3Q8NCJ5 442 aa25.23■■□□□ 1.63
TRIM58-201ENST00000366481 BCL2L13Q9BXK5 485 aa25.23■■□□□ 1.63
TRIM58-201ENST00000366481 CANXP27824 592 aaKnown RBP25.22■■□□□ 1.63
TRIM58-201ENST00000366481 BECN1Q14457 450 aa25.22■■□□□ 1.63
TRIM58-201ENST00000366481 KANK1Q14678 1352 aa25.22■■□□□ 1.63
TRIM58-201ENST00000366481 EIF2AK4Q9P2K8 1649 aaKnown RBP25.22■■□□□ 1.63
TRIM58-201ENST00000366481 PKNOX2Q96KN3 472 aa25.21■■□□□ 1.63
TRIM58-201ENST00000366481 VSIG10Q8N0Z9 540 aa25.21■■□□□ 1.63
TRIM58-201ENST00000366481 PANK1Q8TE04 598 aa25.2■■□□□ 1.63
TRIM58-201ENST00000366481 ZNF521Q96K83 1311 aa25.2■■□□□ 1.63
TRIM58-201ENST00000366481 ABCC1P33527 1531 aa25.2■■□□□ 1.62
TRIM58-201ENST00000366481 ZCCHC11Q5TAX3 1644 aaKnown RBP25.19■■□□□ 1.62
TRIM58-201ENST00000366481 RRAGDQ9NQL2 400 aaPredicted RBP25.19■■□□□ 1.62
TRIM58-201ENST00000366481 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
TRIM58-201ENST00000366481 COG6Q9Y2V7 657 aa25.18■■□□□ 1.62
TRIM58-201ENST00000366481 L1TD1Q5T7N2 865 aaKnown RBP25.18■■□□□ 1.62
TRIM58-201ENST00000366481 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
TRIM58-201ENST00000366481 ASXL1Q8IXJ9 1541 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 MORC1Q86VD1 984 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
TRIM58-201ENST00000366481 EIF3AQ14152 1382 aaKnown RBP25.15■■□□□ 1.62
TRIM58-201ENST00000366481 FANCAO15360 1455 aa25.15■■□□□ 1.62
TRIM58-201ENST00000366481 IGHDP01880 384 aa25.14■■□□□ 1.62
TRIM58-201ENST00000366481 CLUAP1Q96AJ1 413 aa25.14■■□□□ 1.61
TRIM58-201ENST00000366481 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
TRIM58-201ENST00000366481 SHROOM2Q13796 1616 aa25.11■■□□□ 1.61
TRIM58-201ENST00000366481 CFAP65Q6ZU64 1925 aaKnown RBP25.1■■□□□ 1.61
TRIM58-201ENST00000366481 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
TRIM58-201ENST00000366481 RAPGEF3O95398 923 aa25.1■■□□□ 1.61
TRIM58-201ENST00000366481 LAMC1P11047 1609 aa25.09■■□□□ 1.61
TRIM58-201ENST00000366481 PTPRTO14522 1441 aa25.09■■□□□ 1.61
TRIM58-201ENST00000366481 CENPJQ9HC77 1338 aaPredicted RBP25.09■■□□□ 1.61
TRIM58-201ENST00000366481 WWC1Q8IX03 1113 aa25.09■■□□□ 1.61
TRIM58-201ENST00000366481 TRPM2O94759 1503 aa25.09■■□□□ 1.61
TRIM58-201ENST00000366481 ADGRL1O94910 1474 aa25.08■■□□□ 1.61
TRIM58-201ENST00000366481 STK26Q9P289 416 aa25.08■■□□□ 1.61
TRIM58-201ENST00000366481 NOS1P29475 1434 aa25.08■■□□□ 1.61
TRIM58-201ENST00000366481 E9PSI1 815 aa25.08■■□□□ 1.6
TRIM58-201ENST00000366481 HSP90AA2PQ14568 343 aaPredicted RBP25.08■■□□□ 1.6
TRIM58-201ENST00000366481 RNF17Q9BXT8 1623 aaKnown RBP25.08■■□□□ 1.6
TRIM58-201ENST00000366481 GOLGA6L3A6NEY3 463 aa25.07■■□□□ 1.6
TRIM58-201ENST00000366481 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
TRIM58-201ENST00000366481 HSP90AA1P07900 732 aaKnown RBP25.07■■□□□ 1.6
TRIM58-201ENST00000366481 MTHFSP49914 203 aa25.06■■□□□ 1.6
TRIM58-201ENST00000366481 SEC24BO95487 1268 aa25.06■■□□□ 1.6
TRIM58-201ENST00000366481 TCP11L2Q8N4U5 519 aa25.05■■□□□ 1.6
TRIM58-201ENST00000366481 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms