RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 TLL1O43897 1013 aa5.77□□□□□ -1.49
MIR539-201ENST00000365690 SWT1Q5T5J6 900 aaKnown RBP5.77□□□□□ -1.49
MIR539-201ENST00000365690 ZNF697Q5TEC3 545 aa5.77□□□□□ -1.49
MIR539-201ENST00000365690 PLA2G2CQ5R387 149 aa5.76□□□□□ -1.49
MIR539-201ENST00000365690 ANKLE1Q8NAG6 615 aa5.76□□□□□ -1.49
MIR539-201ENST00000365690 CDHR5Q9HBB8 845 aa5.76□□□□□ -1.49
MIR539-201ENST00000365690 BLOC1S3Q6QNY0 202 aa5.75□□□□□ -1.49
MIR539-201ENST00000365690 TTC13Q8NBP0 860 aa5.75□□□□□ -1.49
MIR539-201ENST00000365690 PKD2L1Q9P0L9 805 aa5.75□□□□□ -1.49
MIR539-201ENST00000365690 GMPR2Q9P2T1 348 aaKnown RBP5.75□□□□□ -1.49
MIR539-201ENST00000365690 PDIA6Q15084 440 aa5.74□□□□□ -1.49
MIR539-201ENST00000365690 CRIPAKQ8N1N5 446 aa5.74□□□□□ -1.49
MIR539-201ENST00000365690 S1PR4O95977 384 aa5.73□□□□□ -1.49
MIR539-201ENST00000365690 CERKQ8TCT0 537 aa5.73□□□□□ -1.49
MIR539-201ENST00000365690 PCDHB3Q9Y5E6 796 aa5.72□□□□□ -1.49
MIR539-201ENST00000365690 AVPP01185 164 aa5.71□□□□□ -1.5
MIR539-201ENST00000365690 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
MIR539-201ENST00000365690 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
MIR539-201ENST00000365690 RBM27Q9P2N5 1060 aaKnown RBP5.7□□□□□ -1.5
MIR539-201ENST00000365690 C11orf95C9JLR9 678 aaPredicted RBP5.69□□□□□ -1.5
MIR539-201ENST00000365690 OSBPP22059 807 aa5.69□□□□□ -1.5
MIR539-201ENST00000365690 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
MIR539-201ENST00000365690 HDGFP51858 240 aaKnown RBP5.69□□□□□ -1.5
MIR539-201ENST00000365690 INSM1Q01101 510 aaPredicted RBP5.69□□□□□ -1.5
MIR539-201ENST00000365690 EYA1Q99502 592 aa5.69□□□□□ -1.5
MIR539-201ENST00000365690 PADI6Q6TGC4 694 aa5.68□□□□□ -1.5
MIR539-201ENST00000365690 TOR4AQ9NXH8 423 aa5.68□□□□□ -1.5
MIR539-201ENST00000365690 NECTIN2Q92692 538 aa5.67□□□□□ -1.5
MIR539-201ENST00000365690 SPDYE16A6NNV3 312 aaPredicted RBP5.66□□□□□ -1.5
MIR539-201ENST00000365690 SNRPBP14678 240 aaKnown RBP5.66□□□□□ -1.5
MIR539-201ENST00000365690 SMCPP49901 116 aaPredicted RBP5.66□□□□□ -1.5
MIR539-201ENST00000365690 FOXC1Q12948 553 aa5.66□□□□□ -1.5
MIR539-201ENST00000365690 GRXCR2A6NFK2 248 aa5.65□□□□□ -1.5
MIR539-201ENST00000365690 AXIN1O15169 862 aa5.65□□□□□ -1.5
MIR539-201ENST00000365690 TERTO14746 1132 aaKnown RBP5.64□□□□□ -1.51
MIR539-201ENST00000365690 ADH1BP00325 375 aa5.64□□□□□ -1.51
MIR539-201ENST00000365690 LMOD2Q6P5Q4 547 aa5.64□□□□□ -1.51
MIR539-201ENST00000365690 ACTN4O43707 911 aaKnown RBP5.63□□□□□ -1.51
MIR539-201ENST00000365690 PRR14Q9BWN1 585 aa5.63□□□□□ -1.51
MIR539-201ENST00000365690 SUZ12Q15022 739 aaKnown RBP5.62□□□□□ -1.51
MIR539-201ENST00000365690 CTC1Q2NKJ3 1217 aa5.62□□□□□ -1.51
MIR539-201ENST00000365690 SLC6A16Q9GZN6 736 aa5.61□□□□□ -1.51
MIR539-201ENST00000365690 SLC10A3P09131 477 aa5.6□□□□□ -1.51
MIR539-201ENST00000365690 ARIH1Q9Y4X5 557 aaPredicted RBP5.6□□□□□ -1.51
MIR539-201ENST00000365690 TMEM134Q9H6X4 195 aa5.59□□□□□ -1.51
MIR539-201ENST00000365690 ATP13A2Q9NQ11 1180 aa5.59□□□□□ -1.51
MIR539-201ENST00000365690 CFHP08603 1231 aa5.58□□□□□ -1.52
MIR539-201ENST00000365690 SMPD1P17405 629 aa5.58□□□□□ -1.52
MIR539-201ENST00000365690 RPIAP49247 311 aa5.58□□□□□ -1.52
MIR539-201ENST00000365690 SCUBE3Q8IX30 993 aa5.58□□□□□ -1.52
MIR539-201ENST00000365690 TRIM47Q96LD4 638 aa5.58□□□□□ -1.52
MIR539-201ENST00000365690 CYP4X1Q8N118 509 aa5.57□□□□□ -1.52
MIR539-201ENST00000365690 DNAJB2P25686 324 aa5.56□□□□□ -1.52
MIR539-201ENST00000365690 NR1I2O75469 434 aa5.55□□□□□ -1.52
MIR539-201ENST00000365690 GMPRP36959 345 aa5.55□□□□□ -1.52
MIR539-201ENST00000365690 SLC4A3P48751 1232 aa5.55□□□□□ -1.52
MIR539-201ENST00000365690 KMT5BQ4FZB7 885 aa5.55□□□□□ -1.52
MIR539-201ENST00000365690 PUS10Q3MIT2 529 aaKnown RBP5.54□□□□□ -1.52
MIR539-201ENST00000365690 SPSB2Q99619 263 aa5.54□□□□□ -1.52
MIR539-201ENST00000365690 FCF1Q9Y324 198 aaKnown RBP5.54□□□□□ -1.52
MIR539-201ENST00000365690 ADGRG1Q9Y653 693 aa5.54□□□□□ -1.52
MIR539-201ENST00000365690 RCCD1A6NED2 376 aa5.53□□□□□ -1.52
MIR539-201ENST00000365690 FAM161AQ3B820 660 aa5.53□□□□□ -1.52
MIR539-201ENST00000365690 ZSCAN1Q8NBB4 408 aa5.53□□□□□ -1.52
MIR539-201ENST00000365690 J3QL48 77 aa5.52□□□□□ -1.53
MIR539-201ENST00000365690 GSK3AP49840 483 aa5.52□□□□□ -1.53
MIR539-201ENST00000365690 E2F4Q16254 413 aa5.52□□□□□ -1.53
MIR539-201ENST00000365690 FAM160A2Q8N612 972 aaPredicted RBP5.52□□□□□ -1.53
MIR539-201ENST00000365690 THAP11Q96EK4 314 aa5.52□□□□□ -1.53
MIR539-201ENST00000365690 TTC24A2A3L6 582 aaPredicted RBP5.51□□□□□ -1.53
MIR539-201ENST00000365690 CD2BP2O95400 341 aaKnown RBP5.51□□□□□ -1.53
MIR539-201ENST00000365690 HPS1Q92902 700 aa5.51□□□□□ -1.53
MIR539-201ENST00000365690 ERBB4Q15303 1308 aa5.5□□□□□ -1.53
MIR539-201ENST00000365690 FAM181BA6NEQ2 426 aa5.5□□□□□ -1.53
MIR539-201ENST00000365690 SENP2Q9HC62 589 aa5.5□□□□□ -1.53
MIR539-201ENST00000365690 PRDM9Q9NQV7 894 aa5.5□□□□□ -1.53
MIR539-201ENST00000365690 WNT7AO00755 349 aa5.49□□□□□ -1.53
MIR539-201ENST00000365690 PTGDRQ13258 359 aa5.49□□□□□ -1.53
MIR539-201ENST00000365690 SNIP1Q8TAD8 396 aaKnown RBP5.49□□□□□ -1.53
MIR539-201ENST00000365690 NXF1Q9UBU9 619 aaKnown RBP5.49□□□□□ -1.53
MIR539-201ENST00000365690 RBM46Q8TBY0 533 aaKnown RBP5.48□□□□□ -1.53
MIR539-201ENST00000365690 VEGFBP49765 207 aa5.47□□□□□ -1.53
MIR539-201ENST00000365690 MORN1Q5T089 497 aa5.47□□□□□ -1.53
MIR539-201ENST00000365690 MRGPRX2Q96LB1 330 aa5.47□□□□□ -1.53
MIR539-201ENST00000365690 H3BM21 787 aa5.46□□□□□ -1.54
MIR539-201ENST00000365690 KIFC2Q96AC6 838 aa5.46□□□□□ -1.54
MIR539-201ENST00000365690 MLLT3P42568 568 aaPredicted RBP5.45□□□□□ -1.54
MIR539-201ENST00000365690 KCTD17Q8N5Z5 321 aa5.45□□□□□ -1.54
MIR539-201ENST00000365690 SLC16A10Q8TF71 515 aa5.45□□□□□ -1.54
MIR539-201ENST00000365690 TRIM46Q7Z4K8 759 aa5.44□□□□□ -1.54
MIR539-201ENST00000365690 IRF7Q92985 503 aa5.44□□□□□ -1.54
MIR539-201ENST00000365690 SLC27A5Q9Y2P5 690 aa5.44□□□□□ -1.54
MIR539-201ENST00000365690 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.43□□□□□ -1.54
MIR539-201ENST00000365690 TRIM32Q13049 653 aa5.43□□□□□ -1.54
MIR539-201ENST00000365690 BRICD5Q6PL45 260 aa5.43□□□□□ -1.54
MIR539-201ENST00000365690 NPAS3Q8IXF0 933 aa5.43□□□□□ -1.54
MIR539-201ENST00000365690 PXYLP1Q8TE99 480 aa5.43□□□□□ -1.54
MIR539-201ENST00000365690 FUT2Q10981 343 aa5.42□□□□□ -1.54
MIR539-201ENST00000365690 KCNMA1Q12791 1236 aa5.42□□□□□ -1.54
MIR539-201ENST00000365690 BMP1P13497 986 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms