RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 IQGAP3Q86VI3 1631 aa12.55□□□□□ -0.4
RNU4-59P-201ENST00000364447 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 KCNA6P17658 529 aa12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 ITGAEP38570 1179 aa12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 NWD1Q149M9 1564 aa12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
RNU4-59P-201ENST00000364447 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
RNU4-59P-201ENST00000364447 ZFYVE9O95405 1425 aa12.53□□□□□ -0.4
RNU4-59P-201ENST00000364447 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
RNU4-59P-201ENST00000364447 CHGAP10645 457 aaKnown RBP12.52□□□□□ -0.41
RNU4-59P-201ENST00000364447 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
RNU4-59P-201ENST00000364447 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.41
RNU4-59P-201ENST00000364447 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
RNU4-59P-201ENST00000364447 ROBO1Q9Y6N7 1651 aa12.51□□□□□ -0.41
RNU4-59P-201ENST00000364447 PPARGC1BQ86YN6 1023 aaKnown RBP12.5□□□□□ -0.41
RNU4-59P-201ENST00000364447 NUP155O75694 1391 aa12.5□□□□□ -0.41
RNU4-59P-201ENST00000364447 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
RNU4-59P-201ENST00000364447 MSH6P52701 1360 aa12.49□□□□□ -0.41
RNU4-59P-201ENST00000364447 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
RNU4-59P-201ENST00000364447 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
RNU4-59P-201ENST00000364447 SPHKAPQ2M3C7 1700 aa12.48□□□□□ -0.41
RNU4-59P-201ENST00000364447 DIP2AQ14689 1571 aa12.48□□□□□ -0.41
RNU4-59P-201ENST00000364447 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
RNU4-59P-201ENST00000364447 TBX22Q9Y458 520 aa12.45□□□□□ -0.42
RNU4-59P-201ENST00000364447 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
RNU4-59P-201ENST00000364447 TRPM2O94759 1503 aa12.44□□□□□ -0.42
RNU4-59P-201ENST00000364447 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
RNU4-59P-201ENST00000364447 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
RNU4-59P-201ENST00000364447 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
RNU4-59P-201ENST00000364447 NCOA3Q9Y6Q9 1424 aa12.42□□□□□ -0.42
RNU4-59P-201ENST00000364447 PIK3R4Q99570 1358 aa12.42□□□□□ -0.42
RNU4-59P-201ENST00000364447 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
RNU4-59P-201ENST00000364447 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
RNU4-59P-201ENST00000364447 KIF1BO60333 1816 aa12.4□□□□□ -0.42
RNU4-59P-201ENST00000364447 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
RNU4-59P-201ENST00000364447 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
RNU4-59P-201ENST00000364447 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
RNU4-59P-201ENST00000364447 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
RNU4-59P-201ENST00000364447 NAIPQ13075 1403 aa12.38□□□□□ -0.43
RNU4-59P-201ENST00000364447 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
RNU4-59P-201ENST00000364447 ATF3P18847 181 aa12.38□□□□□ -0.43
RNU4-59P-201ENST00000364447 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
RNU4-59P-201ENST00000364447 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
RNU4-59P-201ENST00000364447 C19orf44Q9H6X5 657 aa12.37□□□□□ -0.43
RNU4-59P-201ENST00000364447 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
RNU4-59P-201ENST00000364447 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
RNU4-59P-201ENST00000364447 JCADQ9P266 1359 aa12.36□□□□□ -0.43
RNU4-59P-201ENST00000364447 RGS17Q9UGC6 210 aaPredicted RBP12.36□□□□□ -0.43
RNU4-59P-201ENST00000364447 NEXMIFQ5QGS0 1516 aa12.36□□□□□ -0.43
RNU4-59P-201ENST00000364447 TRIM52Q96A61 297 aa12.35□□□□□ -0.43
RNU4-59P-201ENST00000364447 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
RNU4-59P-201ENST00000364447 HFM1A2PYH4 1435 aa12.35□□□□□ -0.43
RNU4-59P-201ENST00000364447 DCCP43146 1447 aa12.34□□□□□ -0.43
RNU4-59P-201ENST00000364447 SHPRHQ149N8 1683 aa12.33□□□□□ -0.44
RNU4-59P-201ENST00000364447 METP08581 1390 aa12.32□□□□□ -0.44
RNU4-59P-201ENST00000364447 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
RNU4-59P-201ENST00000364447 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
RNU4-59P-201ENST00000364447 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
RNU4-59P-201ENST00000364447 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
RNU4-59P-201ENST00000364447 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
RNU4-59P-201ENST00000364447 SLC4A1APQ9BWU0 796 aaKnown RBP12.3□□□□□ -0.44
RNU4-59P-201ENST00000364447 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
RNU4-59P-201ENST00000364447 PPLO60437 1756 aa12.3□□□□□ -0.44
RNU4-59P-201ENST00000364447 ADGRL3Q9HAR2 1447 aa12.29□□□□□ -0.44
RNU4-59P-201ENST00000364447 LRP6O75581 1613 aa12.29□□□□□ -0.44
RNU4-59P-201ENST00000364447 NHSL1Q5SYE7 1610 aa12.29□□□□□ -0.44
RNU4-59P-201ENST00000364447 MST1RQ04912 1400 aa12.28□□□□□ -0.44
RNU4-59P-201ENST00000364447 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
RNU4-59P-201ENST00000364447 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
RNU4-59P-201ENST00000364447 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
RNU4-59P-201ENST00000364447 PTCH1Q13635 1447 aa12.26□□□□□ -0.45
RNU4-59P-201ENST00000364447 CCDC144AA2RUR9 1427 aa12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 ZNF772Q68DY9 489 aaPredicted RBP12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 SETD5Q9C0A6 1442 aa12.24□□□□□ -0.45
RNU4-59P-201ENST00000364447 FOXD1Q16676 465 aa12.23□□□□□ -0.45
RNU4-59P-201ENST00000364447 ROBO2Q9HCK4 1378 aa12.22□□□□□ -0.45
RNU4-59P-201ENST00000364447 LRRC59Q96AG4 307 aaKnown RBP12.22□□□□□ -0.45
RNU4-59P-201ENST00000364447 IFT172Q9UG01 1749 aa12.22□□□□□ -0.45
RNU4-59P-201ENST00000364447 C1orf167Q5SNV9 1468 aa12.21□□□□□ -0.45
RNU4-59P-201ENST00000364447 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
RNU4-59P-201ENST00000364447 LAMC1P11047 1609 aa12.2□□□□□ -0.46
RNU4-59P-201ENST00000364447 DDX17Q92841 729 aaKnown RBP12.2□□□□□ -0.46
RNU4-59P-201ENST00000364447 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
RNU4-59P-201ENST00000364447 CDC42BPGQ6DT37 1551 aa12.18□□□□□ -0.46
RNU4-59P-201ENST00000364447 AFF2P51816 1311 aa12.18□□□□□ -0.46
RNU4-59P-201ENST00000364447 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
RNU4-59P-201ENST00000364447 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
RNU4-59P-201ENST00000364447 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
RNU4-59P-201ENST00000364447 ADGRF5Q8IZF2 1346 aa12.17□□□□□ -0.46
RNU4-59P-201ENST00000364447 RXRBP28702 533 aa12.17□□□□□ -0.46
RNU4-59P-201ENST00000364447 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
RNU4-59P-201ENST00000364447 KNDC1Q76NI1 1749 aa12.17□□□□□ -0.46
RNU4-59P-201ENST00000364447 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
RNU4-59P-201ENST00000364447 ORAI2Q96SN7 254 aa12.16□□□□□ -0.46
RNU4-59P-201ENST00000364447 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms