RNA–Protein interactions for RNA: ENST00000363022.2

RNU1-17P-201, Transcript of RNA, U1 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU1-17P, Length 152 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-17P-201ENST00000363022 KDM5AP29375 1690 aaKnown RBP3.19□□□□□ -1.9
RNU1-17P-201ENST00000363022 UBR1Q8IWV7 1749 aa3.19□□□□□ -1.9
RNU1-17P-201ENST00000363022 SETD5Q9C0A6 1442 aa3.19□□□□□ -1.9
RNU1-17P-201ENST00000363022 WASHC2CQ9Y4E1 1318 aa3.19□□□□□ -1.9
RNU1-17P-201ENST00000363022 KIF3BO15066 747 aa3.18□□□□□ -1.9
RNU1-17P-201ENST00000363022 HSPA6P17066 643 aa3.18□□□□□ -1.9
RNU1-17P-201ENST00000363022 FAM182BQ5T319 152 aa3.18□□□□□ -1.9
RNU1-17P-201ENST00000363022 SEPT12Q8IYM1 358 aa3.18□□□□□ -1.9
RNU1-17P-201ENST00000363022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.18□□□□□ -1.9
RNU1-17P-201ENST00000363022 GLI3P10071 1580 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 CAMSAP2Q08AD1 1489 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 ARHGAP23Q9P227 1491 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 KCNQ2O43526 872 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 C14orf37Q86TY3 774 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 DNAJC5GQ8N7S2 189 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 SPON1Q9HCB6 807 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 EID1Q9Y6B2 187 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 TET3O43151 1660 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 UNC13BO14795 1591 aa3.17□□□□□ -1.9
RNU1-17P-201ENST00000363022 NINLQ9Y2I6 1382 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 ABCC3O15438 1527 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 SLIT1O75093 1534 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 ATF3P18847 181 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 KRT27Q7Z3Y8 459 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 CADPS2Q86UW7 1296 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 BCANQ96GW7 911 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 CAMKK2Q96RR4 588 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 PDGFDQ9GZP0 370 aaPredicted RBP3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 C19orf44Q9H6X5 657 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 RALGAPBQ86X10 1494 aa3.16□□□□□ -1.9
RNU1-17P-201ENST00000363022 ASXL1Q8IXJ9 1541 aa3.15□□□□□ -1.9
RNU1-17P-201ENST00000363022 SYCP2Q9BX26 1530 aa3.15□□□□□ -1.9
RNU1-17P-201ENST00000363022 CHD2O14647 1828 aaKnown RBP3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 SYT17Q9BSW7 474 aa3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 INO80Q9ULG1 1556 aaPredicted RBP3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 SHANK3Q9BYB0 1731 aa3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 NKTRP30414 1462 aaKnown RBP3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 PRXQ9BXM0 1461 aa3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 PREX2Q70Z35 1606 aa3.15□□□□□ -1.91
RNU1-17P-201ENST00000363022 DHX29Q7Z478 1369 aaKnown RBP3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 TMEM2Q9UHN6 1383 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 CDC42BPAQ5VT25 1732 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 TROQ12816 1431 aaPredicted RBP3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 FAM83GA6ND36 823 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 ONECUT3O60422 494 aaPredicted RBP3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 UNC5CLQ8IV45 518 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 FHDC1Q9C0D6 1143 aaPredicted RBP3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 ATF5Q9Y2D1 282 aaPredicted RBP3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 MROH1Q8NDA8 1641 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 ERVK-7P63135 1459 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 ARHGAP35Q9NRY4 1499 aa3.14□□□□□ -1.91
RNU1-17P-201ENST00000363022 SPHKAPQ2M3C7 1700 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 NRKQ7Z2Y5 1582 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 PTCH1Q13635 1447 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 ZBTB7AO95365 584 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 PTGER2P43116 358 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 HTRA3P83110 453 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 WWC3Q9ULE0 1092 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 CDK11AQ9UQ88 783 aaPredicted RBP3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 MYOM1P52179 1685 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 ZNF644Q9H582 1327 aaPredicted RBP3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 RGPD1P0DJD0 1748 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 LRRIQ1Q96JM4 1722 aa3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 TNS1Q9HBL0 1735 aaKnown RBP3.13□□□□□ -1.91
RNU1-17P-201ENST00000363022 PIK3C2BO00750 1634 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 MST1RQ04912 1400 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 A0A0G2JS52 829 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 PPP1R15AO75807 674 aaPredicted RBP3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 TRIM37O94972 964 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 APBA3O96018 575 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 MYT1Q01538 1121 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 IDI1Q13907 227 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 GPR162Q16538 588 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 FAM161AQ3B820 660 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 NBPF8Q3BBV2 869 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 NBPF14Q5TI25 921 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 ZNF526Q8TF50 670 aaPredicted RBP3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 ORAI2Q96SN7 254 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 STAG3Q9UJ98 1225 aa3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 CCDC9Q9Y3X0 531 aaKnown RBP3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 MARF1Q9Y4F3 1742 aaKnown RBP3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 GPATCH8Q9UKJ3 1502 aaKnown RBP3.12□□□□□ -1.91
RNU1-17P-201ENST00000363022 DISP2A7MBM2 1401 aa3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 TNS2Q63HR2 1409 aa3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 NCOA3Q9Y6Q9 1424 aa3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 NUP188Q5SRE5 1749 aa3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 SLIT2O94813 1529 aa3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 FAM98CQ17RN3 349 aaKnown RBP3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 SOS2Q07890 1332 aaPredicted RBP3.11□□□□□ -1.91
RNU1-17P-201ENST00000363022 CLIP1P30622 1438 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 FMN1Q68DA7 1419 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 ATP10DQ9P241 1426 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 MYOM2P54296 1465 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 PLEKHG5O94827 1062 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 APLP1P51693 650 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 XPCQ01831 940 aaPredicted RBP3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 VPS72Q15906 364 aa3.1□□□□□ -1.91
RNU1-17P-201ENST00000363022 PELP1Q8IZL8 1130 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms