RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 FGD1P98174 961 aa17.54■□□□□ 0.4
CTR9-201ENST00000361367 SLC12A5Q9H2X9 1139 aa17.54■□□□□ 0.4
CTR9-201ENST00000361367 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
CTR9-201ENST00000361367 ESCO1Q5FWF5 840 aa17.53■□□□□ 0.4
CTR9-201ENST00000361367 BCL2L13Q9BXK5 485 aa17.53■□□□□ 0.4
CTR9-201ENST00000361367 GOLGA6L22H0YM25 854 aa17.52■□□□□ 0.4
CTR9-201ENST00000361367 NGEFQ8N5V2 710 aa17.52■□□□□ 0.4
CTR9-201ENST00000361367 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
CTR9-201ENST00000361367 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.4
CTR9-201ENST00000361367 RIPK4P57078 832 aa17.52■□□□□ 0.4
CTR9-201ENST00000361367 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.39
CTR9-201ENST00000361367 GPATCH8Q9UKJ3 1502 aaKnown RBP17.52■□□□□ 0.39
CTR9-201ENST00000361367 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.39
CTR9-201ENST00000361367 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
CTR9-201ENST00000361367 MTHFSP49914 203 aa17.51■□□□□ 0.39
CTR9-201ENST00000361367 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
CTR9-201ENST00000361367 HMMRO75330 724 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 HMOX1P09601 288 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 NUP153P49790 1475 aaKnown RBP17.5■□□□□ 0.39
CTR9-201ENST00000361367 ASXL2Q76L83 1435 aa17.5■□□□□ 0.39
CTR9-201ENST00000361367 RAPGEF6Q8TEU7 1601 aa17.49■□□□□ 0.39
CTR9-201ENST00000361367 CABP1Q9NZU7 370 aa17.49■□□□□ 0.39
CTR9-201ENST00000361367 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
CTR9-201ENST00000361367 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
CTR9-201ENST00000361367 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
CTR9-201ENST00000361367 WDR62O43379 1518 aa17.47■□□□□ 0.39
CTR9-201ENST00000361367 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
CTR9-201ENST00000361367 NLRP2Q9NX02 1062 aa17.47■□□□□ 0.39
CTR9-201ENST00000361367 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
CTR9-201ENST00000361367 TAF7LQ5H9L4 462 aa17.46■□□□□ 0.39
CTR9-201ENST00000361367 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
CTR9-201ENST00000361367 PLCH2O75038 1416 aa17.46■□□□□ 0.39
CTR9-201ENST00000361367 IDI1Q13907 227 aa17.46■□□□□ 0.39
CTR9-201ENST00000361367 DHX29Q7Z478 1369 aaKnown RBP17.46■□□□□ 0.39
CTR9-201ENST00000361367 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
CTR9-201ENST00000361367 MCCP23508 829 aa17.45■□□□□ 0.38
CTR9-201ENST00000361367 ZKSCAN2Q63HK3 967 aa17.45■□□□□ 0.38
CTR9-201ENST00000361367 NAP1L2Q9ULW6 460 aaPredicted RBP17.45■□□□□ 0.38
CTR9-201ENST00000361367 RTEL1-TNFRSF6BF6WH68 1400 aa17.44■□□□□ 0.38
CTR9-201ENST00000361367 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
CTR9-201ENST00000361367 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
CTR9-201ENST00000361367 PLIN1O60240 522 aa17.44■□□□□ 0.38
CTR9-201ENST00000361367 PPP2R1AP30153 589 aa17.44■□□□□ 0.38
CTR9-201ENST00000361367 BRD4O60885 1362 aaPredicted RBP17.44■□□□□ 0.38
CTR9-201ENST00000361367 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
CTR9-201ENST00000361367 GTF2E1P29083 439 aaPredicted RBP17.43■□□□□ 0.38
CTR9-201ENST00000361367 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
CTR9-201ENST00000361367 GORABQ5T7V8 394 aa17.43■□□□□ 0.38
CTR9-201ENST00000361367 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
CTR9-201ENST00000361367 KIAA1211Q6ZU35 1233 aa17.42■□□□□ 0.38
CTR9-201ENST00000361367 PPP6R1Q9UPN7 881 aa17.42■□□□□ 0.38
CTR9-201ENST00000361367 SYTL4Q96C24 671 aaPredicted RBP17.41■□□□□ 0.38
CTR9-201ENST00000361367 KIAA0556O60303 1618 aa17.41■□□□□ 0.38
CTR9-201ENST00000361367 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
CTR9-201ENST00000361367 NUP160Q12769 1436 aa17.4■□□□□ 0.38
CTR9-201ENST00000361367 TCERG1O14776 1098 aaKnown RBP17.4■□□□□ 0.38
CTR9-201ENST00000361367 GNAI1P63096 354 aa17.4■□□□□ 0.38
CTR9-201ENST00000361367 WDR7Q9Y4E6 1490 aa17.4■□□□□ 0.38
CTR9-201ENST00000361367 ATAD2Q6PL18 1390 aa17.39■□□□□ 0.38
CTR9-201ENST00000361367 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
CTR9-201ENST00000361367 HSCBQ8IWL3 235 aa17.39■□□□□ 0.37
CTR9-201ENST00000361367 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
CTR9-201ENST00000361367 TPRNQ4KMQ1 711 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 NECTIN2Q92692 538 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
CTR9-201ENST00000361367 CTTNBP2Q8WZ74 1663 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 COG6Q9Y2V7 657 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 CCDC61Q9Y6R9 512 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 GPATCH3Q96I76 525 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
CTR9-201ENST00000361367 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
CTR9-201ENST00000361367 WAPLQ7Z5K2 1190 aa17.37■□□□□ 0.37
CTR9-201ENST00000361367 NEXNQ0ZGT2 675 aa17.37■□□□□ 0.37
CTR9-201ENST00000361367 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
CTR9-201ENST00000361367 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
CTR9-201ENST00000361367 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
CTR9-201ENST00000361367 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
CTR9-201ENST00000361367 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
CTR9-201ENST00000361367 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
CTR9-201ENST00000361367 EXOC6Q8TAG9 804 aa17.34■□□□□ 0.37
CTR9-201ENST00000361367 TEX14Q8IWB6 1497 aa17.34■□□□□ 0.37
CTR9-201ENST00000361367 CRBNQ96SW2 442 aa17.33■□□□□ 0.37
CTR9-201ENST00000361367 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.37
CTR9-201ENST00000361367 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.37
CTR9-201ENST00000361367 PTPRKQ15262 1439 aa17.33■□□□□ 0.36
CTR9-201ENST00000361367 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
CTR9-201ENST00000361367 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
CTR9-201ENST00000361367 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
CTR9-201ENST00000361367 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
CTR9-201ENST00000361367 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
CTR9-201ENST00000361367 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
CTR9-201ENST00000361367 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
CTR9-201ENST00000361367 ZNF518AQ6AHZ1 1483 aa17.31■□□□□ 0.36
CTR9-201ENST00000361367 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
CTR9-201ENST00000361367 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms