RNA–Protein interactions for RNA: ENST00000355703.3

PCNX3-201, Transcript of pecanex 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNX3, Length 7,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-201ENST00000355703 HDAC5Q9UQL6 1122 aa19.35■□□□□ 0.69
PCNX3-201ENST00000355703 ST18O60284 1047 aa19.34■□□□□ 0.69
PCNX3-201ENST00000355703 TRDNQ13061 729 aa19.34■□□□□ 0.69
PCNX3-201ENST00000355703 PDILTQ8N807 584 aa19.34■□□□□ 0.69
PCNX3-201ENST00000355703 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
PCNX3-201ENST00000355703 CAGE1Q8TC20 777 aa19.33■□□□□ 0.69
PCNX3-201ENST00000355703 PIP4K2BP78356 416 aa19.33■□□□□ 0.68
PCNX3-201ENST00000355703 DIAPH3Q9NSV4 1193 aa19.33■□□□□ 0.68
PCNX3-201ENST00000355703 MPHOSPH10O00566 681 aaKnown RBP19.33■□□□□ 0.68
PCNX3-201ENST00000355703 TEFQ10587 303 aa19.32■□□□□ 0.68
PCNX3-201ENST00000355703 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
PCNX3-201ENST00000355703 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
PCNX3-201ENST00000355703 CPLX2Q6PUV4 134 aaKnown RBP19.31■□□□□ 0.68
PCNX3-201ENST00000355703 NEXNQ0ZGT2 675 aa19.31■□□□□ 0.68
PCNX3-201ENST00000355703 GRM1Q13255 1194 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 BICD2Q8TD16 824 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 ZHX3Q9H4I2 956 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 SYCP1Q15431 976 aa19.3■□□□□ 0.68
PCNX3-201ENST00000355703 PSME1Q06323 249 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 WDR78Q5VTH9 848 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 WASHC4Q2M389 1173 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 PDCL3Q9H2J4 239 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
PCNX3-201ENST00000355703 HMGN5P82970 282 aaKnown RBP19.28■□□□□ 0.68
PCNX3-201ENST00000355703 ATP2B1P20020 1258 aa19.28■□□□□ 0.68
PCNX3-201ENST00000355703 KRT18P05783 430 aaKnown RBP19.28■□□□□ 0.68
PCNX3-201ENST00000355703 NUTM2GQ5VZR2 741 aa19.27■□□□□ 0.68
PCNX3-201ENST00000355703 BRPF1P55201 1214 aaPredicted RBP19.27■□□□□ 0.68
PCNX3-201ENST00000355703 IFIT2P09913 472 aaKnown RBP19.27■□□□□ 0.67
PCNX3-201ENST00000355703 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
PCNX3-201ENST00000355703 CHMP4AQ9BY43 222 aa19.26■□□□□ 0.67
PCNX3-201ENST00000355703 SEPT7Q16181 437 aaKnown RBP19.26■□□□□ 0.67
PCNX3-201ENST00000355703 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
PCNX3-201ENST00000355703 RDXP35241 583 aaKnown RBP19.25■□□□□ 0.67
PCNX3-201ENST00000355703 CCDC173Q0VFZ6 552 aa19.25■□□□□ 0.67
PCNX3-201ENST00000355703 CDK5RAP3Q96JB5 506 aa19.25■□□□□ 0.67
PCNX3-201ENST00000355703 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
PCNX3-201ENST00000355703 HOOK1Q9UJC3 728 aaKnown RBP19.25■□□□□ 0.67
PCNX3-201ENST00000355703 LMOD3Q0VAK6 560 aa19.24■□□□□ 0.67
PCNX3-201ENST00000355703 CDR1P51861 262 aa19.24■□□□□ 0.67
PCNX3-201ENST00000355703 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
PCNX3-201ENST00000355703 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
PCNX3-201ENST00000355703 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
PCNX3-201ENST00000355703 KTN1Q86UP2 1357 aaKnown RBP19.22■□□□□ 0.67
PCNX3-201ENST00000355703 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
PCNX3-201ENST00000355703 CCNB3Q8WWL7 1395 aa19.22■□□□□ 0.67
PCNX3-201ENST00000355703 HSP90AB4PQ58FF6 505 aa19.21■□□□□ 0.67
PCNX3-201ENST00000355703 SEPT11Q9NVA2 429 aaKnown RBP19.21■□□□□ 0.67
PCNX3-201ENST00000355703 ROCK2O75116 1388 aaKnown RBP19.21■□□□□ 0.67
PCNX3-201ENST00000355703 VPS37CA5D8V6 355 aaPredicted RBP19.21■□□□□ 0.67
PCNX3-201ENST00000355703 ZRSR2Q15696 482 aaKnown RBP19.21■□□□□ 0.67
PCNX3-201ENST00000355703 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
PCNX3-201ENST00000355703 TTLL12Q14166 644 aaPredicted RBP19.2■□□□□ 0.66
PCNX3-201ENST00000355703 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
PCNX3-201ENST00000355703 SAFBQ15424 915 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCNX3-201ENST00000355703 RCAN3Q9UKA8 241 aa19.19■□□□□ 0.66
PCNX3-201ENST00000355703 ECM2O94769 699 aaPredicted RBP19.19■□□□□ 0.66
PCNX3-201ENST00000355703 DDX49Q9Y6V7 483 aaKnown RBP19.18■□□□□ 0.66
PCNX3-201ENST00000355703 HSP90AB3PQ58FF7 597 aa19.18■□□□□ 0.66
PCNX3-201ENST00000355703 PUS7Q96PZ0 661 aaKnown RBP19.18■□□□□ 0.66
PCNX3-201ENST00000355703 SCLT1Q96NL6 688 aa19.18■□□□□ 0.66
PCNX3-201ENST00000355703 H0YHG0 523 aa19.17■□□□□ 0.66
PCNX3-201ENST00000355703 TEX35Q5T0J7 233 aa19.17■□□□□ 0.66
PCNX3-201ENST00000355703 BRMS1Q9HCU9 246 aa19.17■□□□□ 0.66
PCNX3-201ENST00000355703 SSR1P43307 286 aaKnown RBP19.17■□□□□ 0.66
PCNX3-201ENST00000355703 ZSCAN29Q8IWY8 852 aaPredicted RBP19.17■□□□□ 0.66
PCNX3-201ENST00000355703 KIF3BO15066 747 aa19.17■□□□□ 0.66
PCNX3-201ENST00000355703 WASHC2CQ9Y4E1 1318 aa19.16■□□□□ 0.66
PCNX3-201ENST00000355703 G3BP1Q13283 466 aaKnown RBP eCLIP19.16■□□□□ 0.66
PCNX3-201ENST00000355703 RIC3Q7Z5B4 369 aa19.16■□□□□ 0.66
PCNX3-201ENST00000355703 TAX1BP1Q86VP1 789 aa19.15■□□□□ 0.66
PCNX3-201ENST00000355703 ATF3P18847 181 aa19.15■□□□□ 0.66
PCNX3-201ENST00000355703 CBX1P83916 185 aa19.15■□□□□ 0.66
PCNX3-201ENST00000355703 COG3Q96JB2 828 aa19.13■□□□□ 0.65
PCNX3-201ENST00000355703 RALYLQ86SE5 291 aaKnown RBP19.13■□□□□ 0.65
PCNX3-201ENST00000355703 SASS6Q6UVJ0 657 aa19.13■□□□□ 0.65
PCNX3-201ENST00000355703 PIBF1Q8WXW3 757 aa19.12■□□□□ 0.65
PCNX3-201ENST00000355703 CCDC180Q9P1Z9 1646 aa19.12■□□□□ 0.65
PCNX3-201ENST00000355703 MNS1Q8NEH6 495 aa19.12■□□□□ 0.65
PCNX3-201ENST00000355703 PKD2Q13563 968 aa19.12■□□□□ 0.65
PCNX3-201ENST00000355703 CENPHQ9H3R5 247 aa19.12■□□□□ 0.65
PCNX3-201ENST00000355703 ZKSCAN1P17029 563 aaPredicted RBP19.11■□□□□ 0.65
PCNX3-201ENST00000355703 TANGO6Q9C0B7 1094 aa19.11■□□□□ 0.65
PCNX3-201ENST00000355703 DCTN1Q14203 1278 aa19.11■□□□□ 0.65
PCNX3-201ENST00000355703 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
PCNX3-201ENST00000355703 IFT57Q9NWB7 429 aa19.11■□□□□ 0.65
PCNX3-201ENST00000355703 CLIP1P30622 1438 aa19.1■□□□□ 0.65
PCNX3-201ENST00000355703 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
PCNX3-201ENST00000355703 TSPYL1Q9H0U9 437 aa19.1■□□□□ 0.65
PCNX3-201ENST00000355703 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
PCNX3-201ENST00000355703 HSP90AA2PQ14568 343 aaPredicted RBP19.09■□□□□ 0.65
PCNX3-201ENST00000355703 MYO6Q9UM54 1294 aa19.09■□□□□ 0.65
PCNX3-201ENST00000355703 RUFY2Q8WXA3 655 aa19.09■□□□□ 0.65
PCNX3-201ENST00000355703 MAGEC2Q9UBF1 373 aaPredicted RBP19.08■□□□□ 0.65
PCNX3-201ENST00000355703 DNAJC2Q99543 621 aaKnown RBP19.08■□□□□ 0.65
PCNX3-201ENST00000355703 ATP6V1DQ9Y5K8 247 aa19.07■□□□□ 0.64
PCNX3-201ENST00000355703 COMMD10Q9Y6G5 202 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms