RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.12
CTSA-202ENST00000354880 NEXMIFQ5QGS0 1516 aa22.02■■□□□ 1.12
CTSA-202ENST00000354880 NRXN1Q9ULB1 1477 aa22.02■■□□□ 1.12
CTSA-202ENST00000354880 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
CTSA-202ENST00000354880 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
CTSA-202ENST00000354880 NBPF1Q3BBV0 1214 aa22■■□□□ 1.11
CTSA-202ENST00000354880 A2ML1A8K2U0 1454 aa21.99■■□□□ 1.11
CTSA-202ENST00000354880 USP47Q96K76 1375 aa21.99■■□□□ 1.11
CTSA-202ENST00000354880 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
CTSA-202ENST00000354880 KIAA1210Q9ULL0 1709 aa21.98■■□□□ 1.11
CTSA-202ENST00000354880 LAMC1P11047 1609 aa21.98■■□□□ 1.11
CTSA-202ENST00000354880 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
CTSA-202ENST00000354880 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
CTSA-202ENST00000354880 KDM5AP29375 1690 aaKnown RBP21.96■■□□□ 1.11
CTSA-202ENST00000354880 PIK3C2GO75747 1445 aa21.96■■□□□ 1.11
CTSA-202ENST00000354880 ZFYVE9O95405 1425 aa21.96■■□□□ 1.11
CTSA-202ENST00000354880 NUTM2DQ5VT03 806 aaPredicted RBP21.94■■□□□ 1.1
CTSA-202ENST00000354880 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
CTSA-202ENST00000354880 UBR1Q8IWV7 1749 aa21.93■■□□□ 1.1
CTSA-202ENST00000354880 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
CTSA-202ENST00000354880 RIMS2Q9UQ26 1411 aa21.9■■□□□ 1.1
CTSA-202ENST00000354880 C14orf93Q9H972 538 aaKnown RBP21.9■■□□□ 1.1
CTSA-202ENST00000354880 MYO3AQ8NEV4 1616 aa21.88■■□□□ 1.09
CTSA-202ENST00000354880 ST20-MTHFSA0A0A6YYL1 179 aa21.87■■□□□ 1.09
CTSA-202ENST00000354880 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
CTSA-202ENST00000354880 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.87■■□□□ 1.09
CTSA-202ENST00000354880 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
CTSA-202ENST00000354880 SCAF11Q99590 1463 aaKnown RBP21.86■■□□□ 1.09
CTSA-202ENST00000354880 HDGFP51858 240 aaKnown RBP21.85■■□□□ 1.09
CTSA-202ENST00000354880 TMEM2Q9UHN6 1383 aa21.85■■□□□ 1.09
CTSA-202ENST00000354880 SETD1BQ9UPS6 1966 aaKnown RBP21.84■■□□□ 1.09
CTSA-202ENST00000354880 PTPRMP28827 1452 aa21.84■■□□□ 1.09
CTSA-202ENST00000354880 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
CTSA-202ENST00000354880 ADGRB1O14514 1584 aa21.82■■□□□ 1.08
CTSA-202ENST00000354880 POLR1AO95602 1720 aaPredicted RBP21.81■■□□□ 1.08
CTSA-202ENST00000354880 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
CTSA-202ENST00000354880 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
CTSA-202ENST00000354880 THEMISQ8N1K5 641 aaPredicted RBP21.8■■□□□ 1.08
CTSA-202ENST00000354880 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
CTSA-202ENST00000354880 CCDC7Q96M83 1385 aa21.79■■□□□ 1.08
CTSA-202ENST00000354880 DDX10Q13206 875 aaKnown RBP21.79■■□□□ 1.08
CTSA-202ENST00000354880 SLIT1O75093 1534 aa21.79■■□□□ 1.08
CTSA-202ENST00000354880 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
CTSA-202ENST00000354880 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
CTSA-202ENST00000354880 ALKQ9UM73 1620 aa21.78■■□□□ 1.08
CTSA-202ENST00000354880 ARHGAP23Q9P227 1491 aa21.78■■□□□ 1.08
CTSA-202ENST00000354880 KIF7Q2M1P5 1343 aa21.77■■□□□ 1.08
CTSA-202ENST00000354880 ZNF142P52746 1687 aaPredicted RBP21.77■■□□□ 1.07
CTSA-202ENST00000354880 TESK2Q96S53 571 aa21.76■■□□□ 1.07
CTSA-202ENST00000354880 EID1Q9Y6B2 187 aa21.76■■□□□ 1.07
CTSA-202ENST00000354880 LTKP29376 864 aa21.74■■□□□ 1.07
CTSA-202ENST00000354880 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
CTSA-202ENST00000354880 ASXL1Q8IXJ9 1541 aa21.74■■□□□ 1.07
CTSA-202ENST00000354880 NRXN3Q9Y4C0 1643 aa21.73■■□□□ 1.07
CTSA-202ENST00000354880 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
CTSA-202ENST00000354880 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
CTSA-202ENST00000354880 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
CTSA-202ENST00000354880 TMF1P82094 1093 aa21.69■■□□□ 1.06
CTSA-202ENST00000354880 BCANQ96GW7 911 aa21.69■■□□□ 1.06
CTSA-202ENST00000354880 YTHDC2Q9H6S0 1430 aaKnown RBP21.69■■□□□ 1.06
CTSA-202ENST00000354880 CENPJQ9HC77 1338 aaPredicted RBP21.68■■□□□ 1.06
CTSA-202ENST00000354880 SLC24A1O60721 1099 aa21.68■■□□□ 1.06
CTSA-202ENST00000354880 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
CTSA-202ENST00000354880 KDM4FA0A1W2PPD8 638 aa21.67■■□□□ 1.06
CTSA-202ENST00000354880 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
CTSA-202ENST00000354880 DISP3Q9P2K9 1392 aa21.67■■□□□ 1.06
CTSA-202ENST00000354880 STK26Q9P289 416 aa21.66■■□□□ 1.06
CTSA-202ENST00000354880 SBNO2Q9Y2G9 1366 aa21.66■■□□□ 1.06
CTSA-202ENST00000354880 ADAMTS13Q76LX8 1427 aa21.66■■□□□ 1.06
CTSA-202ENST00000354880 METP08581 1390 aa21.64■■□□□ 1.05
CTSA-202ENST00000354880 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
CTSA-202ENST00000354880 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
CTSA-202ENST00000354880 ANKLE2Q86XL3 938 aa21.62■■□□□ 1.05
CTSA-202ENST00000354880 MED14O60244 1454 aa21.62■■□□□ 1.05
CTSA-202ENST00000354880 CDCA8Q53HL2 280 aa21.62■■□□□ 1.05
CTSA-202ENST00000354880 MIER1Q8N108 512 aa21.61■■□□□ 1.05
CTSA-202ENST00000354880 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
CTSA-202ENST00000354880 DLC1Q96QB1 1528 aa21.59■■□□□ 1.05
CTSA-202ENST00000354880 SLC26A8Q96RN1 970 aa21.59■■□□□ 1.05
CTSA-202ENST00000354880 TBX22Q9Y458 520 aa21.59■■□□□ 1.05
CTSA-202ENST00000354880 DIP2AQ14689 1571 aa21.59■■□□□ 1.05
CTSA-202ENST00000354880 PRAM1Q96QH2 718 aa21.57■■□□□ 1.04
CTSA-202ENST00000354880 POGKQ9P215 609 aa21.57■■□□□ 1.04
CTSA-202ENST00000354880 KNDC1Q76NI1 1749 aa21.56■■□□□ 1.04
CTSA-202ENST00000354880 TECPR2O15040 1411 aa21.55■■□□□ 1.04
CTSA-202ENST00000354880 SAFB2Q14151 953 aaKnown RBP eCLIP21.55■■□□□ 1.04
CTSA-202ENST00000354880 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
CTSA-202ENST00000354880 CPS1P31327 1500 aa21.52■■□□□ 1.04
CTSA-202ENST00000354880 ANP32CO43423 234 aa21.52■■□□□ 1.04
CTSA-202ENST00000354880 FAM135BQ49AJ0 1406 aa21.52■■□□□ 1.03
CTSA-202ENST00000354880 EVC2Q86UK5 1308 aa21.51■■□□□ 1.03
CTSA-202ENST00000354880 WAPLQ7Z5K2 1190 aa21.5■■□□□ 1.03
CTSA-202ENST00000354880 PTPRUQ92729 1446 aa21.5■■□□□ 1.03
CTSA-202ENST00000354880 TULP4Q9NRJ4 1543 aa21.49■■□□□ 1.03
CTSA-202ENST00000354880 NPHP4O75161 1426 aaPredicted RBP21.49■■□□□ 1.03
CTSA-202ENST00000354880 PIK3R4Q99570 1358 aa21.49■■□□□ 1.03
CTSA-202ENST00000354880 PLEKHH1Q9ULM0 1364 aa21.49■■□□□ 1.03
CTSA-202ENST00000354880 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
CTSA-202ENST00000354880 PUS7Q96PZ0 661 aaKnown RBP21.48■■□□□ 1.03
CTSA-202ENST00000354880 AMOTL2Q9Y2J4 779 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms