RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.53
PDGFA-201ENST00000354513 SLC52A1Q9NWF4 448 aa24.58■■□□□ 1.52
PDGFA-201ENST00000354513 ROBO1Q9Y6N7 1651 aa24.57■■□□□ 1.52
PDGFA-201ENST00000354513 SLC26A8Q96RN1 970 aa24.56■■□□□ 1.52
PDGFA-201ENST00000354513 TMEM94Q12767 1356 aa24.56■■□□□ 1.52
PDGFA-201ENST00000354513 SPHKAPQ2M3C7 1700 aa24.54■■□□□ 1.52
PDGFA-201ENST00000354513 RIMS2Q9UQ26 1411 aa24.54■■□□□ 1.52
PDGFA-201ENST00000354513 KCNA6P17658 529 aa24.53■■□□□ 1.52
PDGFA-201ENST00000354513 PLEKHG1Q9ULL1 1385 aa24.52■■□□□ 1.52
PDGFA-201ENST00000354513 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
PDGFA-201ENST00000354513 FAM135BQ49AJ0 1406 aa24.49■■□□□ 1.51
PDGFA-201ENST00000354513 RBM33Q96EV2 1170 aaKnown RBP24.48■■□□□ 1.51
PDGFA-201ENST00000354513 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
PDGFA-201ENST00000354513 DIP2AQ14689 1571 aa24.48■■□□□ 1.51
PDGFA-201ENST00000354513 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
PDGFA-201ENST00000354513 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
PDGFA-201ENST00000354513 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
PDGFA-201ENST00000354513 PROSER2Q86WR7 435 aaPredicted RBP24.42■■□□□ 1.5
PDGFA-201ENST00000354513 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
PDGFA-201ENST00000354513 NUP155O75694 1391 aa24.41■■□□□ 1.5
PDGFA-201ENST00000354513 CLTCL1P53675 1640 aa24.4■■□□□ 1.5
PDGFA-201ENST00000354513 XRN1Q8IZH2 1706 aaKnown RBP24.4■■□□□ 1.5
PDGFA-201ENST00000354513 ITGAEP38570 1179 aa24.39■■□□□ 1.5
PDGFA-201ENST00000354513 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
PDGFA-201ENST00000354513 COL16A1Q07092 1604 aaPredicted RBP24.38■■□□□ 1.49
PDGFA-201ENST00000354513 TRPM2O94759 1503 aa24.38■■□□□ 1.49
PDGFA-201ENST00000354513 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
PDGFA-201ENST00000354513 MSH6P52701 1360 aa24.36■■□□□ 1.49
PDGFA-201ENST00000354513 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-201ENST00000354513 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-201ENST00000354513 BCANQ96GW7 911 aa24.35■■□□□ 1.49
PDGFA-201ENST00000354513 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
PDGFA-201ENST00000354513 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
PDGFA-201ENST00000354513 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
PDGFA-201ENST00000354513 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-201ENST00000354513 RGS17Q9UGC6 210 aaPredicted RBP24.35■■□□□ 1.49
PDGFA-201ENST00000354513 KIF1BO60333 1816 aa24.34■■□□□ 1.49
PDGFA-201ENST00000354513 NEXMIFQ5QGS0 1516 aa24.32■■□□□ 1.48
PDGFA-201ENST00000354513 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.32■■□□□ 1.48
PDGFA-201ENST00000354513 PIK3R4Q99570 1358 aa24.31■■□□□ 1.48
PDGFA-201ENST00000354513 NAIPQ13075 1403 aa24.31■■□□□ 1.48
PDGFA-201ENST00000354513 NCOA3Q9Y6Q9 1424 aa24.31■■□□□ 1.48
PDGFA-201ENST00000354513 SETD1AO15047 1707 aaKnown RBP24.3■■□□□ 1.48
PDGFA-201ENST00000354513 HDGFP51858 240 aaKnown RBP24.3■■□□□ 1.48
PDGFA-201ENST00000354513 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
PDGFA-201ENST00000354513 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
PDGFA-201ENST00000354513 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
PDGFA-201ENST00000354513 SHPRHQ149N8 1683 aa24.25■■□□□ 1.47
PDGFA-201ENST00000354513 NHSL1Q5SYE7 1610 aa24.21■■□□□ 1.47
PDGFA-201ENST00000354513 PPLO60437 1756 aa24.21■■□□□ 1.47
PDGFA-201ENST00000354513 LRP6O75581 1613 aa24.2■■□□□ 1.46
PDGFA-201ENST00000354513 HFM1A2PYH4 1435 aa24.18■■□□□ 1.46
PDGFA-201ENST00000354513 AMOTL2Q9Y2J4 779 aa24.18■■□□□ 1.46
PDGFA-201ENST00000354513 METP08581 1390 aa24.18■■□□□ 1.46
PDGFA-201ENST00000354513 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
PDGFA-201ENST00000354513 JCADQ9P266 1359 aa24.17■■□□□ 1.46
PDGFA-201ENST00000354513 DCCP43146 1447 aa24.17■■□□□ 1.46
PDGFA-201ENST00000354513 ASXL1Q8IXJ9 1541 aa24.14■■□□□ 1.46
PDGFA-201ENST00000354513 C19orf44Q9H6X5 657 aa24.14■■□□□ 1.46
PDGFA-201ENST00000354513 MST1RQ04912 1400 aa24.13■■□□□ 1.45
PDGFA-201ENST00000354513 C14orf37Q86TY3 774 aa24.12■■□□□ 1.45
PDGFA-201ENST00000354513 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
PDGFA-201ENST00000354513 IFT172Q9UG01 1749 aa24.12■■□□□ 1.45
PDGFA-201ENST00000354513 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
PDGFA-201ENST00000354513 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
PDGFA-201ENST00000354513 ATF3P18847 181 aa24.09■■□□□ 1.45
PDGFA-201ENST00000354513 LAMC1P11047 1609 aa24.08■■□□□ 1.44
PDGFA-201ENST00000354513 BRINP3Q76B58 766 aa24.08■■□□□ 1.44
PDGFA-201ENST00000354513 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
PDGFA-201ENST00000354513 PTCH1Q13635 1447 aa24.04■■□□□ 1.44
PDGFA-201ENST00000354513 SPATA31A6Q5VVP1 1343 aa24.03■■□□□ 1.44
PDGFA-201ENST00000354513 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
PDGFA-201ENST00000354513 TRIM52Q96A61 297 aa24■■□□□ 1.43
PDGFA-201ENST00000354513 ROBO2Q9HCK4 1378 aa23.98■■□□□ 1.43
PDGFA-201ENST00000354513 SLC4A1APQ9BWU0 796 aaKnown RBP23.97■■□□□ 1.43
PDGFA-201ENST00000354513 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
PDGFA-201ENST00000354513 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
PDGFA-201ENST00000354513 SPATA31E1Q6ZUB1 1445 aa23.94■■□□□ 1.42
PDGFA-201ENST00000354513 FOXD1Q16676 465 aa23.94■■□□□ 1.42
PDGFA-201ENST00000354513 DDX17Q92841 729 aaKnown RBP23.93■■□□□ 1.42
PDGFA-201ENST00000354513 RPGRIP1LQ68CZ1 1315 aa23.93■■□□□ 1.42
PDGFA-201ENST00000354513 CDC42BPGQ6DT37 1551 aa23.92■■□□□ 1.42
PDGFA-201ENST00000354513 VGFO15240 615 aaPredicted RBP23.91■■□□□ 1.42
PDGFA-201ENST00000354513 PNPLA6Q8IY17 1366 aa23.9■■□□□ 1.42
PDGFA-201ENST00000354513 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.41
PDGFA-201ENST00000354513 MEX3CQ5U5Q3 659 aaKnown RBP23.87■■□□□ 1.41
PDGFA-201ENST00000354513 CCDC144AA2RUR9 1427 aa23.87■■□□□ 1.41
PDGFA-201ENST00000354513 ADGRF5Q8IZF2 1346 aa23.86■■□□□ 1.41
PDGFA-201ENST00000354513 NUTM2BA6NNL0 878 aaPredicted RBP23.85■■□□□ 1.41
PDGFA-201ENST00000354513 NUTM2EB1AL46 878 aaPredicted RBP23.85■■□□□ 1.41
PDGFA-201ENST00000354513 NUTM2AQ8IVF1 878 aaPredicted RBP23.85■■□□□ 1.41
PDGFA-201ENST00000354513 TECPR2O15040 1411 aa23.85■■□□□ 1.41
PDGFA-201ENST00000354513 FMN2Q9NZ56 1722 aa23.85■■□□□ 1.41
PDGFA-201ENST00000354513 MARF1Q9Y4F3 1742 aaKnown RBP23.85■■□□□ 1.41
PDGFA-201ENST00000354513 ZNF772Q68DY9 489 aaPredicted RBP23.84■■□□□ 1.41
PDGFA-201ENST00000354513 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.4
PDGFA-201ENST00000354513 PIK3C2GO75747 1445 aa23.82■■□□□ 1.4
PDGFA-201ENST00000354513 CDK12Q9NYV4 1490 aaPredicted RBP23.82■■□□□ 1.4
PDGFA-201ENST00000354513 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
PDGFA-201ENST00000354513 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms