RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 SPC24Q8NBT2 197 aa14.35□□□□□ -0.11
CDK5RAP2-201ENST00000349780 MPHOSPH9Q99550 1183 aa14.35□□□□□ -0.11
CDK5RAP2-201ENST00000349780 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
CDK5RAP2-201ENST00000349780 PANK2Q9BZ23 570 aa14.34□□□□□ -0.11
CDK5RAP2-201ENST00000349780 EIF3AQ14152 1382 aaKnown RBP14.33□□□□□ -0.11
CDK5RAP2-201ENST00000349780 GORABQ5T7V8 394 aa14.33□□□□□ -0.11
CDK5RAP2-201ENST00000349780 CHMP3Q9Y3E7 222 aa14.33□□□□□ -0.11
CDK5RAP2-201ENST00000349780 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
CDK5RAP2-201ENST00000349780 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
CDK5RAP2-201ENST00000349780 USP8P40818 1118 aa14.33□□□□□ -0.12
CDK5RAP2-201ENST00000349780 CCDC7Q96M83 1385 aa14.33□□□□□ -0.12
CDK5RAP2-201ENST00000349780 FMN1Q68DA7 1419 aa14.31□□□□□ -0.12
CDK5RAP2-201ENST00000349780 GIMAP7Q8NHV1 300 aa14.31□□□□□ -0.12
CDK5RAP2-201ENST00000349780 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
CDK5RAP2-201ENST00000349780 AAMPQ13685 434 aa14.3□□□□□ -0.12
CDK5RAP2-201ENST00000349780 CCDC70Q6NSX1 233 aa14.3□□□□□ -0.12
CDK5RAP2-201ENST00000349780 TNNT1P13805 278 aa14.3□□□□□ -0.12
CDK5RAP2-201ENST00000349780 SKIDA1Q1XH10 827 aa14.3□□□□□ -0.12
CDK5RAP2-201ENST00000349780 TRIM5Q9C035 493 aa14.29□□□□□ -0.12
CDK5RAP2-201ENST00000349780 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
CDK5RAP2-201ENST00000349780 ZKSCAN2Q63HK3 967 aa14.29□□□□□ -0.12
CDK5RAP2-201ENST00000349780 CDCA7LQ96GN5 454 aa14.28□□□□□ -0.12
CDK5RAP2-201ENST00000349780 MCM5P33992 734 aa14.28□□□□□ -0.12
CDK5RAP2-201ENST00000349780 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP2-201ENST00000349780 GTF2F1P35269 517 aaKnown RBP eCLIP14.28□□□□□ -0.121e-8■■■□□ 17.6
CDK5RAP2-201ENST00000349780 SKAP1Q86WV1 359 aa14.27□□□□□ -0.12
CDK5RAP2-201ENST00000349780 KIF20AO95235 890 aa14.27□□□□□ -0.12
CDK5RAP2-201ENST00000349780 OFD1O75665 1012 aa14.27□□□□□ -0.13
CDK5RAP2-201ENST00000349780 RBM25P49756 843 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP2-201ENST00000349780 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 REC8O95072 547 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 CCDC184Q52MB2 194 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 IPO4Q8TEX9 1081 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 ERCC4Q92889 916 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP2-201ENST00000349780 KIF7Q2M1P5 1343 aa14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 RUFY1Q96T51 708 aa14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 U2AF1L5P0DN76 240 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 U2AF1Q01081 240 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■■□□□ 12.7
CDK5RAP2-201ENST00000349780 NOL10Q9BSC4 688 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
CDK5RAP2-201ENST00000349780 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
CDK5RAP2-201ENST00000349780 K7ELQ4 463 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP2-201ENST00000349780 RNF20Q5VTR2 975 aa14.24□□□□□ -0.13
CDK5RAP2-201ENST00000349780 A0A0G2JS52 829 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 IGSF3O75054 1194 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 SF3A1Q15459 793 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 SYCE3A1L190 88 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 H3BQV1 296 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 CCDC191Q8NCU4 936 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 DDX19BQ9UMR2 479 aa14.23□□□□□ -0.13
CDK5RAP2-201ENST00000349780 CREBRFQ8IUR6 639 aa14.22□□□□□ -0.13
CDK5RAP2-201ENST00000349780 HMMRO75330 724 aa14.22□□□□□ -0.13
CDK5RAP2-201ENST00000349780 CDR1P51861 262 aa14.22□□□□□ -0.13
CDK5RAP2-201ENST00000349780 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
CDK5RAP2-201ENST00000349780 KIAA0754O94854 1291 aa14.22□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PKD2Q13563 968 aa14.21□□□□□ -0.13
CDK5RAP2-201ENST00000349780 PLCD4Q9BRC7 762 aa14.21□□□□□ -0.13
CDK5RAP2-201ENST00000349780 INTS3Q68E01 1043 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP2-201ENST00000349780 FBXW7Q969H0 707 aa14.21□□□□□ -0.13
CDK5RAP2-201ENST00000349780 TULP1O00294 542 aaPredicted RBP14.21□□□□□ -0.14
CDK5RAP2-201ENST00000349780 DZIP1LQ8IYY4 767 aaKnown RBP14.21□□□□□ -0.14
CDK5RAP2-201ENST00000349780 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 POLR3GO15318 223 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 RILPL2Q969X0 211 aa14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 USP47Q96K76 1375 aa14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 APAF1O14727 1248 aa14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TMCO3Q6UWJ1 677 aa14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CWC22Q9HCG8 908 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CDC45O75419 566 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 PANK3Q9H999 370 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CCP110O43303 1012 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 KRT222Q8N1A0 295 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 EIF3JO75822 258 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TPM1P09493 284 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 VPS37CA5D8V6 355 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TNPO1Q92973 898 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 SMC3Q9UQE7 1217 aa14.19□□□□□ -0.14
CDK5RAP2-201ENST00000349780 ST20-MTHFSA0A0A6YYL1 179 aa14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 AXDND1Q5T1B0 1012 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 RABEP1Q15276 862 aa14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TTLL5Q6EMB2 1281 aa14.18□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CCDC34Q96HJ3 373 aa14.17□□□□□ -0.14
CDK5RAP2-201ENST00000349780 TSR1Q2NL82 804 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CCDC192P0DO97 292 aa14.16□□□□□ -0.14
CDK5RAP2-201ENST00000349780 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP2-201ENST00000349780 CENPHQ9H3R5 247 aa14.16□□□□□ -0.14
CDK5RAP2-201ENST00000349780 WDR97A6NE52 1622 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms