RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 ADGRB3O60242 1522 aa28.88■■■□□ 2.21
KDM5C-201ENST00000349663 MSH6P52701 1360 aa28.88■■■□□ 2.21
KDM5C-201ENST00000349663 HDGFP51858 240 aaKnown RBP28.86■■■□□ 2.21
KDM5C-201ENST00000349663 NWD1Q149M9 1564 aa28.83■■■□□ 2.21
KDM5C-201ENST00000349663 ADGRL2O95490 1459 aa28.81■■■□□ 2.2
KDM5C-201ENST00000349663 RPRD2Q5VT52 1461 aaKnown RBP28.81■■■□□ 2.2
KDM5C-201ENST00000349663 PPP1R15AO75807 674 aaPredicted RBP28.81■■■□□ 2.2
KDM5C-201ENST00000349663 PLEKHG1Q9ULL1 1385 aa28.8■■■□□ 2.2
KDM5C-201ENST00000349663 FAM50AQ14320 339 aaKnown RBP28.8■■■□□ 2.2
KDM5C-201ENST00000349663 ANKRD50Q9ULJ7 1429 aa28.79■■■□□ 2.2
KDM5C-201ENST00000349663 ZFYVE9O95405 1425 aa28.78■■■□□ 2.2
KDM5C-201ENST00000349663 JCADQ9P266 1359 aa28.77■■■□□ 2.2
KDM5C-201ENST00000349663 TBX22Q9Y458 520 aa28.77■■■□□ 2.2
KDM5C-201ENST00000349663 RIMS2Q9UQ26 1411 aa28.77■■■□□ 2.2
KDM5C-201ENST00000349663 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.73■■■□□ 2.19
KDM5C-201ENST00000349663 CHGAP10645 457 aaKnown RBP28.72■■■□□ 2.19
KDM5C-201ENST00000349663 PHLPP1O60346 1717 aa28.72■■■□□ 2.19
KDM5C-201ENST00000349663 NCOA3Q9Y6Q9 1424 aa28.71■■■□□ 2.19
KDM5C-201ENST00000349663 C14orf37Q86TY3 774 aa28.71■■■□□ 2.19
KDM5C-201ENST00000349663 CHD2O14647 1828 aaKnown RBP28.71■■■□□ 2.19
KDM5C-201ENST00000349663 TMEM131LA2VDJ0 1609 aa28.68■■■□□ 2.18
KDM5C-201ENST00000349663 NUTM2DQ5VT03 806 aaPredicted RBP28.66■■■□□ 2.18
KDM5C-201ENST00000349663 CADPS2Q86UW7 1296 aa28.66■■■□□ 2.18
KDM5C-201ENST00000349663 C19orf44Q9H6X5 657 aa28.66■■■□□ 2.18
KDM5C-201ENST00000349663 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
KDM5C-201ENST00000349663 GCC2Q8IWJ2 1684 aa28.64■■■□□ 2.18
KDM5C-201ENST00000349663 ATF3P18847 181 aa28.64■■■□□ 2.18
KDM5C-201ENST00000349663 SPATA31A6Q5VVP1 1343 aa28.64■■■□□ 2.17
KDM5C-201ENST00000349663 MEX3CQ5U5Q3 659 aaKnown RBP28.62■■■□□ 2.17
KDM5C-201ENST00000349663 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
KDM5C-201ENST00000349663 COL16A1Q07092 1604 aaPredicted RBP28.61■■■□□ 2.17
KDM5C-201ENST00000349663 ADAMTS13Q76LX8 1427 aa28.61■■■□□ 2.17
KDM5C-201ENST00000349663 ZNF772Q68DY9 489 aaPredicted RBP28.59■■■□□ 2.17
KDM5C-201ENST00000349663 AMOTL2Q9Y2J4 779 aa28.57■■■□□ 2.16
KDM5C-201ENST00000349663 LRP6O75581 1613 aa28.55■■■□□ 2.16
KDM5C-201ENST00000349663 UNC13BO14795 1591 aa28.55■■■□□ 2.16
KDM5C-201ENST00000349663 DIP2AQ14689 1571 aa28.55■■■□□ 2.16
KDM5C-201ENST00000349663 SETD1AO15047 1707 aaKnown RBP28.54■■■□□ 2.16
KDM5C-201ENST00000349663 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.54■■■□□ 2.16
KDM5C-201ENST00000349663 E9PCH4 1651 aa28.52■■■□□ 2.16
KDM5C-201ENST00000349663 AHDC1Q5TGY3 1603 aaPredicted RBP28.52■■■□□ 2.16
KDM5C-201ENST00000349663 ROCK1Q13464 1354 aa28.51■■■□□ 2.16
KDM5C-201ENST00000349663 BRINP3Q76B58 766 aa28.51■■■□□ 2.15
KDM5C-201ENST00000349663 NUP155O75694 1391 aa28.5■■■□□ 2.15
KDM5C-201ENST00000349663 TRIM52Q96A61 297 aa28.5■■■□□ 2.15
KDM5C-201ENST00000349663 TRPM2O94759 1503 aa28.48■■■□□ 2.15
KDM5C-201ENST00000349663 UPF1Q92900 1129 aaKnown RBP eCLIP28.48■■■□□ 2.15
KDM5C-201ENST00000349663 PTPRUQ92729 1446 aa28.48■■■□□ 2.15
KDM5C-201ENST00000349663 NUTM2BA6NNL0 878 aaPredicted RBP28.46■■■□□ 2.15
KDM5C-201ENST00000349663 NUTM2EB1AL46 878 aaPredicted RBP28.46■■■□□ 2.15
KDM5C-201ENST00000349663 RXRBP28702 533 aa28.46■■■□□ 2.15
KDM5C-201ENST00000349663 NUTM2AQ8IVF1 878 aaPredicted RBP28.46■■■□□ 2.15
KDM5C-201ENST00000349663 IQGAP3Q86VI3 1631 aa28.46■■■□□ 2.15
KDM5C-201ENST00000349663 SHPRHQ149N8 1683 aa28.45■■■□□ 2.14
KDM5C-201ENST00000349663 DCCP43146 1447 aa28.43■■■□□ 2.14
KDM5C-201ENST00000349663 ITGAEP38570 1179 aa28.4■■■□□ 2.14
KDM5C-201ENST00000349663 ZNF326Q5BKZ1 582 aaKnown RBP28.39■■■□□ 2.14
KDM5C-201ENST00000349663 LRRC59Q96AG4 307 aaKnown RBP28.38■■■□□ 2.13
KDM5C-201ENST00000349663 SETD5Q9C0A6 1442 aa28.37■■■□□ 2.13
KDM5C-201ENST00000349663 AFF2P51816 1311 aa28.37■■■□□ 2.13
KDM5C-201ENST00000349663 ASXL1Q8IXJ9 1541 aa28.36■■■□□ 2.13
KDM5C-201ENST00000349663 MST1RQ04912 1400 aa28.35■■■□□ 2.13
KDM5C-201ENST00000349663 METP08581 1390 aa28.35■■■□□ 2.13
KDM5C-201ENST00000349663 SETBP1Q9Y6X0 1596 aa28.34■■■□□ 2.13
KDM5C-201ENST00000349663 CDK12Q9NYV4 1490 aaPredicted RBP28.33■■■□□ 2.13
KDM5C-201ENST00000349663 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
KDM5C-201ENST00000349663 XRN1Q8IZH2 1706 aaKnown RBP28.32■■■□□ 2.12
KDM5C-201ENST00000349663 DDX17Q92841 729 aaKnown RBP28.29■■■□□ 2.12
KDM5C-201ENST00000349663 C8orf37Q96NL8 207 aa28.28■■■□□ 2.12
KDM5C-201ENST00000349663 QTRT2Q9H974 415 aaKnown RBP28.28■■■□□ 2.12
KDM5C-201ENST00000349663 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.12
KDM5C-201ENST00000349663 NHSL1Q5SYE7 1610 aa28.25■■■□□ 2.11
KDM5C-201ENST00000349663 RBM6P78332 1123 aaKnown RBP28.25■■■□□ 2.11
KDM5C-201ENST00000349663 PNPLA6Q8IY17 1366 aa28.24■■■□□ 2.11
KDM5C-201ENST00000349663 SPHKAPQ2M3C7 1700 aa28.24■■■□□ 2.11
KDM5C-201ENST00000349663 NGLY1Q96IV0 654 aa28.2■■■□□ 2.1
KDM5C-201ENST00000349663 SRCAPQ6ZRS2 3230 aa28.2■■■□□ 2.1
KDM5C-201ENST00000349663 ADAMTS2O95450 1211 aa28.18■■■□□ 2.1
KDM5C-201ENST00000349663 PPARGC1BQ86YN6 1023 aaKnown RBP28.18■■■□□ 2.1
KDM5C-201ENST00000349663 NEXMIFQ5QGS0 1516 aa28.18■■■□□ 2.1
KDM5C-201ENST00000349663 C1orf167Q5SNV9 1468 aa28.17■■■□□ 2.1
KDM5C-201ENST00000349663 RGS12O14924 1447 aa28.17■■■□□ 2.1
KDM5C-201ENST00000349663 VGFO15240 615 aaPredicted RBP28.15■■■□□ 2.1
KDM5C-201ENST00000349663 NALCNQ8IZF0 1738 aa28.14■■■□□ 2.1
KDM5C-201ENST00000349663 CLTCL1P53675 1640 aa28.14■■■□□ 2.09
KDM5C-201ENST00000349663 ORAI2Q96SN7 254 aa28.13■■■□□ 2.09
KDM5C-201ENST00000349663 SOS2Q07890 1332 aaPredicted RBP28.12■■■□□ 2.09
KDM5C-201ENST00000349663 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
KDM5C-201ENST00000349663 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
KDM5C-201ENST00000349663 USP21Q9UK80 565 aa28.09■■■□□ 2.09
KDM5C-201ENST00000349663 TRPC5Q9UL62 973 aaPredicted RBP28.06■■■□□ 2.08
KDM5C-201ENST00000349663 RPGRIP1LQ68CZ1 1315 aa28.06■■■□□ 2.08
KDM5C-201ENST00000349663 KIF1BO60333 1816 aa28.06■■■□□ 2.08
KDM5C-201ENST00000349663 LAMC1P11047 1609 aa28.05■■■□□ 2.08
KDM5C-201ENST00000349663 FNBP4Q8N3X1 1017 aaPredicted RBP28.05■■■□□ 2.08
KDM5C-201ENST00000349663 ATAD2Q6PL18 1390 aa28.03■■■□□ 2.08
KDM5C-201ENST00000349663 NAIPQ13075 1403 aa28.02■■■□□ 2.08
KDM5C-201ENST00000349663 HFM1A2PYH4 1435 aa28.01■■■□□ 2.08
KDM5C-201ENST00000349663 PRAG1Q86YV5 1406 aa28.01■■■□□ 2.07
KDM5C-201ENST00000349663 ESCO1Q5FWF5 840 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms