RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NWD1Q149M9 1564 aa20.12■□□□□ 0.81
CLCC1-202ENST00000348264 PLEKHG1Q9ULL1 1385 aa20.12■□□□□ 0.81
CLCC1-202ENST00000348264 TOM1O60784 492 aa20.12■□□□□ 0.81
CLCC1-202ENST00000348264 CHGAP10645 457 aaKnown RBP20.12■□□□□ 0.81
CLCC1-202ENST00000348264 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
CLCC1-202ENST00000348264 PIP4K2BP78356 416 aa20.11■□□□□ 0.81
CLCC1-202ENST00000348264 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
CLCC1-202ENST00000348264 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
CLCC1-202ENST00000348264 TRPM2O94759 1503 aa20.09■□□□□ 0.81
CLCC1-202ENST00000348264 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
CLCC1-202ENST00000348264 CHD2O14647 1828 aaKnown RBP20.08■□□□□ 0.8
CLCC1-202ENST00000348264 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
CLCC1-202ENST00000348264 KCNA6P17658 529 aa20.07■□□□□ 0.8
CLCC1-202ENST00000348264 BCANQ96GW7 911 aa20.07■□□□□ 0.8
CLCC1-202ENST00000348264 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
CLCC1-202ENST00000348264 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
CLCC1-202ENST00000348264 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
CLCC1-202ENST00000348264 HSPA1LP34931 641 aa20.05■□□□□ 0.8
CLCC1-202ENST00000348264 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
CLCC1-202ENST00000348264 DIP2AQ14689 1571 aa20.04■□□□□ 0.8
CLCC1-202ENST00000348264 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
CLCC1-202ENST00000348264 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
CLCC1-202ENST00000348264 KIF1BO60333 1816 aa20.03■□□□□ 0.8
CLCC1-202ENST00000348264 NRXN3Q9Y4C0 1643 aa20.02■□□□□ 0.8
CLCC1-202ENST00000348264 DISP3Q9P2K9 1392 aa20.02■□□□□ 0.8
CLCC1-202ENST00000348264 RBM33Q96EV2 1170 aaKnown RBP20■□□□□ 0.79
CLCC1-202ENST00000348264 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
CLCC1-202ENST00000348264 PROSER2Q86WR7 435 aaPredicted RBP19.99■□□□□ 0.79
CLCC1-202ENST00000348264 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
CLCC1-202ENST00000348264 SETBP1Q9Y6X0 1596 aa19.99■□□□□ 0.79
CLCC1-202ENST00000348264 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
CLCC1-202ENST00000348264 ZNF326Q5BKZ1 582 aaKnown RBP19.96■□□□□ 0.79
CLCC1-202ENST00000348264 PIK3R4Q99570 1358 aa19.95■□□□□ 0.78
CLCC1-202ENST00000348264 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
CLCC1-202ENST00000348264 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
CLCC1-202ENST00000348264 MED1Q15648 1581 aaPredicted RBP19.93■□□□□ 0.78
CLCC1-202ENST00000348264 ROBO1Q9Y6N7 1651 aa19.93■□□□□ 0.78
CLCC1-202ENST00000348264 MSH6P52701 1360 aa19.92■□□□□ 0.78
CLCC1-202ENST00000348264 FOXD1Q16676 465 aa19.91■□□□□ 0.78
CLCC1-202ENST00000348264 PPLO60437 1756 aa19.9■□□□□ 0.78
CLCC1-202ENST00000348264 FAM135BQ49AJ0 1406 aa19.9■□□□□ 0.78
CLCC1-202ENST00000348264 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
CLCC1-202ENST00000348264 ILDR2Q71H61 639 aa19.88■□□□□ 0.77
CLCC1-202ENST00000348264 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.88■□□□□ 0.77
CLCC1-202ENST00000348264 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
CLCC1-202ENST00000348264 NCOA3Q9Y6Q9 1424 aa19.87■□□□□ 0.77
CLCC1-202ENST00000348264 METP08581 1390 aa19.87■□□□□ 0.77
CLCC1-202ENST00000348264 AMOTL2Q9Y2J4 779 aa19.87■□□□□ 0.77
CLCC1-202ENST00000348264 MPHOSPH9Q99550 1183 aa19.86■□□□□ 0.77
CLCC1-202ENST00000348264 CCDC144AA2RUR9 1427 aa19.85■□□□□ 0.77
CLCC1-202ENST00000348264 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
CLCC1-202ENST00000348264 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
CLCC1-202ENST00000348264 C14orf37Q86TY3 774 aa19.82■□□□□ 0.76
CLCC1-202ENST00000348264 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
CLCC1-202ENST00000348264 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
CLCC1-202ENST00000348264 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
CLCC1-202ENST00000348264 PHLPP1O60346 1717 aa19.8■□□□□ 0.76
CLCC1-202ENST00000348264 NALCNQ8IZF0 1738 aa19.79■□□□□ 0.76
CLCC1-202ENST00000348264 VGFO15240 615 aaPredicted RBP19.79■□□□□ 0.76
CLCC1-202ENST00000348264 C19orf44Q9H6X5 657 aa19.78■□□□□ 0.76
CLCC1-202ENST00000348264 DCCP43146 1447 aa19.77■□□□□ 0.76
CLCC1-202ENST00000348264 COL16A1Q07092 1604 aaPredicted RBP19.76■□□□□ 0.75
CLCC1-202ENST00000348264 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
CLCC1-202ENST00000348264 ACIN1Q9UKV3 1341 aaKnown RBP19.76■□□□□ 0.75
CLCC1-202ENST00000348264 CADPS2Q86UW7 1296 aa19.75■□□□□ 0.75
CLCC1-202ENST00000348264 ADGRL3Q9HAR2 1447 aa19.75■□□□□ 0.75
CLCC1-202ENST00000348264 ATF3P18847 181 aa19.74■□□□□ 0.75
CLCC1-202ENST00000348264 PRAG1Q86YV5 1406 aa19.74■□□□□ 0.75
CLCC1-202ENST00000348264 RGL3Q3MIN7 710 aa19.73■□□□□ 0.75
CLCC1-202ENST00000348264 ADGRF5Q8IZF2 1346 aa19.73■□□□□ 0.75
CLCC1-202ENST00000348264 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
CLCC1-202ENST00000348264 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
CLCC1-202ENST00000348264 MST1RQ04912 1400 aa19.72■□□□□ 0.75
CLCC1-202ENST00000348264 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
CLCC1-202ENST00000348264 ASXL1Q8IXJ9 1541 aa19.71■□□□□ 0.75
CLCC1-202ENST00000348264 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
CLCC1-202ENST00000348264 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
CLCC1-202ENST00000348264 NHSL1Q5SYE7 1610 aa19.67■□□□□ 0.74
CLCC1-202ENST00000348264 SOCS7O14512 581 aa19.67■□□□□ 0.74
CLCC1-202ENST00000348264 BRINP3Q76B58 766 aa19.67■□□□□ 0.74
CLCC1-202ENST00000348264 KNDC1Q76NI1 1749 aa19.66■□□□□ 0.74
CLCC1-202ENST00000348264 JCADQ9P266 1359 aa19.66■□□□□ 0.74
CLCC1-202ENST00000348264 MYOM2P54296 1465 aa19.65■□□□□ 0.74
CLCC1-202ENST00000348264 NRXN1Q9ULB1 1477 aa19.65■□□□□ 0.74
CLCC1-202ENST00000348264 SHPRHQ149N8 1683 aa19.64■□□□□ 0.73
CLCC1-202ENST00000348264 TECPR2O15040 1411 aa19.63■□□□□ 0.73
CLCC1-202ENST00000348264 LAMC1P11047 1609 aa19.62■□□□□ 0.73
CLCC1-202ENST00000348264 C1orf167Q5SNV9 1468 aa19.61■□□□□ 0.73
CLCC1-202ENST00000348264 LRPPRCP42704 1394 aaKnown RBP19.61■□□□□ 0.73
CLCC1-202ENST00000348264 HRCP23327 699 aa19.61■□□□□ 0.73
CLCC1-202ENST00000348264 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
CLCC1-202ENST00000348264 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
CLCC1-202ENST00000348264 LRP6O75581 1613 aa19.6■□□□□ 0.73
CLCC1-202ENST00000348264 TMEM132EQ6IEE7 984 aa19.59■□□□□ 0.73
CLCC1-202ENST00000348264 STK26Q9P289 416 aa19.58■□□□□ 0.72
CLCC1-202ENST00000348264 YTHDC2Q9H6S0 1430 aaKnown RBP19.58■□□□□ 0.72
CLCC1-202ENST00000348264 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
CLCC1-202ENST00000348264 PLEKHH1Q9ULM0 1364 aa19.57■□□□□ 0.72
CLCC1-202ENST00000348264 DDX17Q92841 729 aaKnown RBP19.56■□□□□ 0.72
CLCC1-202ENST00000348264 C14orf93Q9H972 538 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms