RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 CLTCL1P53675 1640 aa25.2■■□□□ 1.63
LYSMD4-202ENST00000344791 TNNT2P45379 298 aaPredicted RBP25.2■■□□□ 1.62
LYSMD4-202ENST00000344791 BCL11AQ9H165 835 aa25.2■■□□□ 1.62
LYSMD4-202ENST00000344791 PDE4AP27815 886 aa25.19■■□□□ 1.62
LYSMD4-202ENST00000344791 RNF17Q9BXT8 1623 aaKnown RBP25.18■■□□□ 1.62
LYSMD4-202ENST00000344791 TRPM2O94759 1503 aa25.17■■□□□ 1.62
LYSMD4-202ENST00000344791 UHRF1BP1LA0JNW5 1464 aa25.16■■□□□ 1.62
LYSMD4-202ENST00000344791 GGT6Q6P531 493 aa25.16■■□□□ 1.62
LYSMD4-202ENST00000344791 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
LYSMD4-202ENST00000344791 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
LYSMD4-202ENST00000344791 APAF1O14727 1248 aa25.15■■□□□ 1.62
LYSMD4-202ENST00000344791 TCERG1O14776 1098 aaKnown RBP25.15■■□□□ 1.62
LYSMD4-202ENST00000344791 NUTM2DQ5VT03 806 aaPredicted RBP25.15■■□□□ 1.62
LYSMD4-202ENST00000344791 DUSP27Q5VZP5 1158 aa25.15■■□□□ 1.62
LYSMD4-202ENST00000344791 RTEL1-TNFRSF6BF6WH68 1400 aa25.14■■□□□ 1.62
LYSMD4-202ENST00000344791 GOLGA2Q08379 1002 aa25.14■■□□□ 1.62
LYSMD4-202ENST00000344791 ATP7AQ04656 1500 aa25.14■■□□□ 1.61
LYSMD4-202ENST00000344791 TRAK1Q9UPV9 953 aa25.14■■□□□ 1.61
LYSMD4-202ENST00000344791 SPHKAPQ2M3C7 1700 aa25.13■■□□□ 1.61
LYSMD4-202ENST00000344791 PTPRTO14522 1441 aa25.13■■□□□ 1.61
LYSMD4-202ENST00000344791 ZMYM4Q5VZL5 1548 aa25.13■■□□□ 1.61
LYSMD4-202ENST00000344791 SPINK5Q9NQ38 1064 aaPredicted RBP25.12■■□□□ 1.61
LYSMD4-202ENST00000344791 EIF3AQ14152 1382 aaKnown RBP25.12■■□□□ 1.61
LYSMD4-202ENST00000344791 CARD14Q9BXL6 1004 aa25.11■■□□□ 1.61
LYSMD4-202ENST00000344791 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
LYSMD4-202ENST00000344791 NEUROD2Q15784 382 aa25.1■■□□□ 1.61
LYSMD4-202ENST00000344791 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
LYSMD4-202ENST00000344791 DEKP35659 375 aaKnown RBP25.09■■□□□ 1.61
LYSMD4-202ENST00000344791 ASXL1Q8IXJ9 1541 aa25.09■■□□□ 1.61
LYSMD4-202ENST00000344791 BACH2Q9BYV9 841 aa25.08■■□□□ 1.61
LYSMD4-202ENST00000344791 LAS1LQ9Y4W2 734 aaKnown RBP25.07■■□□□ 1.6
LYSMD4-202ENST00000344791 CEP152O94986 1710 aa25.07■■□□□ 1.6
LYSMD4-202ENST00000344791 CFAP65Q6ZU64 1925 aaKnown RBP25.06■■□□□ 1.6
LYSMD4-202ENST00000344791 DMRT2Q9Y5R5 561 aa25.06■■□□□ 1.6
LYSMD4-202ENST00000344791 BCAR3O75815 825 aa25.04■■□□□ 1.6
LYSMD4-202ENST00000344791 ASXL2Q76L83 1435 aa25.04■■□□□ 1.6
LYSMD4-202ENST00000344791 TET3O43151 1660 aa25.03■■□□□ 1.6
LYSMD4-202ENST00000344791 SYNMO15061 1565 aa25.03■■□□□ 1.6
LYSMD4-202ENST00000344791 SLC12A5Q9H2X9 1139 aa25.02■■□□□ 1.6
LYSMD4-202ENST00000344791 RRP7AQ9Y3A4 280 aaKnown RBP25.02■■□□□ 1.6
LYSMD4-202ENST00000344791 SLFN5Q08AF3 891 aa25.02■■□□□ 1.6
LYSMD4-202ENST00000344791 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
LYSMD4-202ENST00000344791 RGS3P49796 1198 aa25.01■■□□□ 1.59
LYSMD4-202ENST00000344791 NOS1P29475 1434 aa25.01■■□□□ 1.59
LYSMD4-202ENST00000344791 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
LYSMD4-202ENST00000344791 ZNF521Q96K83 1311 aa25.01■■□□□ 1.59
LYSMD4-202ENST00000344791 ERVK-7P63135 1459 aa25■■□□□ 1.59
LYSMD4-202ENST00000344791 NPM1P06748 294 aaKnown RBP eCLIP24.99■■□□□ 1.59
LYSMD4-202ENST00000344791 RTL5Q5HYW3 569 aaPredicted RBP24.99■■□□□ 1.59
LYSMD4-202ENST00000344791 DEPDC5O75140 1603 aa24.99■■□□□ 1.59
LYSMD4-202ENST00000344791 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
LYSMD4-202ENST00000344791 INSRP06213 1382 aa24.98■■□□□ 1.59
LYSMD4-202ENST00000344791 CENPJQ9HC77 1338 aaPredicted RBP24.98■■□□□ 1.59
LYSMD4-202ENST00000344791 MYOM1P52179 1685 aa24.98■■□□□ 1.59
LYSMD4-202ENST00000344791 PIK3C2GO75747 1445 aa24.97■■□□□ 1.59
LYSMD4-202ENST00000344791 MS4A1P11836 297 aa24.96■■□□□ 1.59
LYSMD4-202ENST00000344791 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.96■■□□□ 1.59
LYSMD4-202ENST00000344791 ABCA6Q8N139 1617 aa24.96■■□□□ 1.59
LYSMD4-202ENST00000344791 MORC1Q86VD1 984 aa24.96■■□□□ 1.59
LYSMD4-202ENST00000344791 ABCA9Q8IUA7 1624 aa24.96■■□□□ 1.59
LYSMD4-202ENST00000344791 KDM5AP29375 1690 aaKnown RBP24.95■■□□□ 1.58
LYSMD4-202ENST00000344791 SLC4A3P48751 1232 aa24.95■■□□□ 1.58
LYSMD4-202ENST00000344791 ARAP3Q8WWN8 1544 aa24.94■■□□□ 1.58
LYSMD4-202ENST00000344791 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
LYSMD4-202ENST00000344791 MAP3K4Q9Y6R4 1608 aa24.93■■□□□ 1.58
LYSMD4-202ENST00000344791 RAPGEF3O95398 923 aa24.92■■□□□ 1.58
LYSMD4-202ENST00000344791 CANXP27824 592 aaKnown RBP24.92■■□□□ 1.58
LYSMD4-202ENST00000344791 VWDEQ8N2E2 1590 aa24.92■■□□□ 1.58
LYSMD4-202ENST00000344791 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
LYSMD4-202ENST00000344791 FRAT1Q92837 279 aaPredicted RBP24.91■■□□□ 1.58
LYSMD4-202ENST00000344791 KDM2BQ8NHM5 1336 aa24.9■■□□□ 1.58
LYSMD4-202ENST00000344791 CENPQQ7L2Z9 268 aaPredicted RBP24.9■■□□□ 1.58
LYSMD4-202ENST00000344791 MROH2AA6NES4 1674 aa24.9■■□□□ 1.58
LYSMD4-202ENST00000344791 PPRC1Q5VV67 1664 aaKnown RBP24.89■■□□□ 1.57
LYSMD4-202ENST00000344791 EFCAB6Q5THR3 1501 aa24.89■■□□□ 1.57
LYSMD4-202ENST00000344791 KIF1BO60333 1816 aa24.88■■□□□ 1.57
LYSMD4-202ENST00000344791 E9PSI1 815 aa24.87■■□□□ 1.57
LYSMD4-202ENST00000344791 BCL2L13Q9BXK5 485 aa24.87■■□□□ 1.57
LYSMD4-202ENST00000344791 NPC1L1Q9UHC9 1359 aa24.87■■□□□ 1.57
LYSMD4-202ENST00000344791 STK26Q9P289 416 aa24.87■■□□□ 1.57
LYSMD4-202ENST00000344791 KIDINS220Q9ULH0 1771 aa24.87■■□□□ 1.57
LYSMD4-202ENST00000344791 PANK1Q8TE04 598 aa24.86■■□□□ 1.57
LYSMD4-202ENST00000344791 MYOM2P54296 1465 aa24.86■■□□□ 1.57
LYSMD4-202ENST00000344791 NPATQ14207 1427 aa24.86■■□□□ 1.57
LYSMD4-202ENST00000344791 WWC1Q8IX03 1113 aa24.86■■□□□ 1.57
LYSMD4-202ENST00000344791 NEFMP07197 916 aa24.85■■□□□ 1.57
LYSMD4-202ENST00000344791 COG6Q9Y2V7 657 aa24.85■■□□□ 1.57
LYSMD4-202ENST00000344791 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
LYSMD4-202ENST00000344791 ZNF518AQ6AHZ1 1483 aa24.84■■□□□ 1.57
LYSMD4-202ENST00000344791 MTHFSP49914 203 aa24.84■■□□□ 1.57
LYSMD4-202ENST00000344791 TRMT2AQ8IZ69 625 aaKnown RBP24.84■■□□□ 1.57
LYSMD4-202ENST00000344791 CD109Q6YHK3 1445 aa24.84■■□□□ 1.57
LYSMD4-202ENST00000344791 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
LYSMD4-202ENST00000344791 SLC24A1O60721 1099 aa24.83■■□□□ 1.57
LYSMD4-202ENST00000344791 C14orf93Q9H972 538 aaKnown RBP24.83■■□□□ 1.56
LYSMD4-202ENST00000344791 TCP11L2Q8N4U5 519 aa24.81■■□□□ 1.56
LYSMD4-202ENST00000344791 IGHDP01880 384 aa24.8■■□□□ 1.56
LYSMD4-202ENST00000344791 KIAA1210Q9ULL0 1709 aa24.79■■□□□ 1.56
LYSMD4-202ENST00000344791 TNNQ9UQP3 1299 aa24.79■■□□□ 1.56
LYSMD4-202ENST00000344791 CLUAP1Q96AJ1 413 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms