RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 EID1Q9Y6B2 187 aa26.01■■□□□ 1.75
BRCC3-202ENST00000340647 SPHKAPQ2M3C7 1700 aa25.98■■□□□ 1.75
BRCC3-202ENST00000340647 SCAF1Q9H7N4 1312 aaKnown RBP25.97■■□□□ 1.75
BRCC3-202ENST00000340647 TOM1O60784 492 aa25.96■■□□□ 1.75
BRCC3-202ENST00000340647 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
BRCC3-202ENST00000340647 RIMS2Q9UQ26 1411 aa25.94■■□□□ 1.74
BRCC3-202ENST00000340647 SLC26A8Q96RN1 970 aa25.93■■□□□ 1.74
BRCC3-202ENST00000340647 HFM1A2PYH4 1435 aa25.93■■□□□ 1.74
BRCC3-202ENST00000340647 CHD2O14647 1828 aaKnown RBP25.9■■□□□ 1.74
BRCC3-202ENST00000340647 NWD1Q149M9 1564 aa25.9■■□□□ 1.74
BRCC3-202ENST00000340647 PLEKHG1Q9ULL1 1385 aa25.89■■□□□ 1.74
BRCC3-202ENST00000340647 SENP3Q9H4L4 574 aaPredicted RBP25.88■■□□□ 1.73
BRCC3-202ENST00000340647 CLTCL1P53675 1640 aa25.87■■□□□ 1.73
BRCC3-202ENST00000340647 KCNA6P17658 529 aa25.85■■□□□ 1.73
BRCC3-202ENST00000340647 ADAMTS13Q76LX8 1427 aa25.85■■□□□ 1.73
BRCC3-202ENST00000340647 CHGAP10645 457 aaKnown RBP25.84■■□□□ 1.73
BRCC3-202ENST00000340647 NUTM2DQ5VT03 806 aaPredicted RBP25.84■■□□□ 1.73
BRCC3-202ENST00000340647 TRPM2O94759 1503 aa25.83■■□□□ 1.72
BRCC3-202ENST00000340647 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
BRCC3-202ENST00000340647 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
BRCC3-202ENST00000340647 TMEM94Q12767 1356 aa25.8■■□□□ 1.72
BRCC3-202ENST00000340647 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
BRCC3-202ENST00000340647 KIF1BO60333 1816 aa25.77■■□□□ 1.72
BRCC3-202ENST00000340647 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
BRCC3-202ENST00000340647 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.76■■□□□ 1.71
BRCC3-202ENST00000340647 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
BRCC3-202ENST00000340647 HDGFP51858 240 aaKnown RBP25.75■■□□□ 1.71
BRCC3-202ENST00000340647 DIP2AQ14689 1571 aa25.74■■□□□ 1.71
BRCC3-202ENST00000340647 NEXMIFQ5QGS0 1516 aa25.74■■□□□ 1.71
BRCC3-202ENST00000340647 BCANQ96GW7 911 aa25.73■■□□□ 1.71
BRCC3-202ENST00000340647 PTPRUQ92729 1446 aa25.72■■□□□ 1.71
BRCC3-202ENST00000340647 PROSER2Q86WR7 435 aaPredicted RBP25.72■■□□□ 1.71
BRCC3-202ENST00000340647 TRIM52Q96A61 297 aa25.72■■□□□ 1.71
BRCC3-202ENST00000340647 SETBP1Q9Y6X0 1596 aa25.72■■□□□ 1.71
BRCC3-202ENST00000340647 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
BRCC3-202ENST00000340647 FOXD1Q16676 465 aa25.67■■□□□ 1.7
BRCC3-202ENST00000340647 PHF23Q9BUL5 403 aaPredicted RBP25.67■■□□□ 1.7
BRCC3-202ENST00000340647 XRN1Q8IZH2 1706 aaKnown RBP25.66■■□□□ 1.7
BRCC3-202ENST00000340647 PIK3R4Q99570 1358 aa25.66■■□□□ 1.7
BRCC3-202ENST00000340647 SETD1AO15047 1707 aaKnown RBP25.65■■□□□ 1.7
BRCC3-202ENST00000340647 ROBO1Q9Y6N7 1651 aa25.64■■□□□ 1.7
BRCC3-202ENST00000340647 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
BRCC3-202ENST00000340647 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
BRCC3-202ENST00000340647 PPLO60437 1756 aa25.63■■□□□ 1.69
BRCC3-202ENST00000340647 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.62■■□□□ 1.69
BRCC3-202ENST00000340647 METP08581 1390 aa25.61■■□□□ 1.69
BRCC3-202ENST00000340647 MPHOSPH9Q99550 1183 aa25.59■■□□□ 1.69
BRCC3-202ENST00000340647 AMOTL2Q9Y2J4 779 aa25.59■■□□□ 1.69
BRCC3-202ENST00000340647 NCOA3Q9Y6Q9 1424 aa25.58■■□□□ 1.69
BRCC3-202ENST00000340647 RGS17Q9UGC6 210 aaPredicted RBP25.58■■□□□ 1.69
BRCC3-202ENST00000340647 MSH6P52701 1360 aa25.56■■□□□ 1.68
BRCC3-202ENST00000340647 SETD5Q9C0A6 1442 aa25.56■■□□□ 1.68
BRCC3-202ENST00000340647 IFT172Q9UG01 1749 aa25.54■■□□□ 1.68
BRCC3-202ENST00000340647 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
BRCC3-202ENST00000340647 SLAIN2Q9P270 581 aa25.52■■□□□ 1.68
BRCC3-202ENST00000340647 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
BRCC3-202ENST00000340647 RPGRIP1LQ68CZ1 1315 aa25.48■■□□□ 1.67
BRCC3-202ENST00000340647 C19orf44Q9H6X5 657 aa25.48■■□□□ 1.67
BRCC3-202ENST00000340647 NALCNQ8IZF0 1738 aa25.48■■□□□ 1.67
BRCC3-202ENST00000340647 PHLPP1O60346 1717 aa25.47■■□□□ 1.67
BRCC3-202ENST00000340647 CCDC144AA2RUR9 1427 aa25.46■■□□□ 1.67
BRCC3-202ENST00000340647 VGFO15240 615 aaPredicted RBP25.46■■□□□ 1.67
BRCC3-202ENST00000340647 COL16A1Q07092 1604 aaPredicted RBP25.45■■□□□ 1.66
BRCC3-202ENST00000340647 ADGRF5Q8IZF2 1346 aa25.43■■□□□ 1.66
BRCC3-202ENST00000340647 PRAG1Q86YV5 1406 aa25.42■■□□□ 1.66
BRCC3-202ENST00000340647 C14orf37Q86TY3 774 aa25.41■■□□□ 1.66
BRCC3-202ENST00000340647 DCCP43146 1447 aa25.4■■□□□ 1.66
BRCC3-202ENST00000340647 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
BRCC3-202ENST00000340647 CADPS2Q86UW7 1296 aa25.4■■□□□ 1.66
BRCC3-202ENST00000340647 ROBO2Q9HCK4 1378 aa25.4■■□□□ 1.66
BRCC3-202ENST00000340647 POTEAQ6S8J7 498 aa25.39■■□□□ 1.66
BRCC3-202ENST00000340647 MST1RQ04912 1400 aa25.38■■□□□ 1.65
BRCC3-202ENST00000340647 ADGRL3Q9HAR2 1447 aa25.38■■□□□ 1.65
BRCC3-202ENST00000340647 ASXL1Q8IXJ9 1541 aa25.38■■□□□ 1.65
BRCC3-202ENST00000340647 AHDC1Q5TGY3 1603 aaPredicted RBP25.38■■□□□ 1.65
BRCC3-202ENST00000340647 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
BRCC3-202ENST00000340647 ATF3P18847 181 aa25.37■■□□□ 1.65
BRCC3-202ENST00000340647 BRINP3Q76B58 766 aa25.35■■□□□ 1.65
BRCC3-202ENST00000340647 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
BRCC3-202ENST00000340647 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
BRCC3-202ENST00000340647 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
BRCC3-202ENST00000340647 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
BRCC3-202ENST00000340647 NRXN1Q9ULB1 1477 aa25.31■■□□□ 1.64
BRCC3-202ENST00000340647 HRCP23327 699 aa25.29■■□□□ 1.64
BRCC3-202ENST00000340647 KNDC1Q76NI1 1749 aa25.29■■□□□ 1.64
BRCC3-202ENST00000340647 SHPRHQ149N8 1683 aa25.28■■□□□ 1.64
BRCC3-202ENST00000340647 JCADQ9P266 1359 aa25.28■■□□□ 1.64
BRCC3-202ENST00000340647 TECPR2O15040 1411 aa25.27■■□□□ 1.64
BRCC3-202ENST00000340647 TMEM132EQ6IEE7 984 aa25.25■■□□□ 1.63
BRCC3-202ENST00000340647 MYOM2P54296 1465 aa25.25■■□□□ 1.63
BRCC3-202ENST00000340647 LRP6O75581 1613 aa25.25■■□□□ 1.63
BRCC3-202ENST00000340647 LAMC1P11047 1609 aa25.25■■□□□ 1.63
BRCC3-202ENST00000340647 C1orf167Q5SNV9 1468 aa25.24■■□□□ 1.63
BRCC3-202ENST00000340647 LRPPRCP42704 1394 aaKnown RBP25.23■■□□□ 1.63
BRCC3-202ENST00000340647 DDX17Q92841 729 aaKnown RBP25.23■■□□□ 1.63
BRCC3-202ENST00000340647 PLEKHH1Q9ULM0 1364 aa25.22■■□□□ 1.63
BRCC3-202ENST00000340647 ABCC11Q96J66 1382 aa25.21■■□□□ 1.63
BRCC3-202ENST00000340647 C14orf93Q9H972 538 aaKnown RBP25.21■■□□□ 1.63
BRCC3-202ENST00000340647 WAPLQ7Z5K2 1190 aa25.2■■□□□ 1.62
BRCC3-202ENST00000340647 CDC42BPGQ6DT37 1551 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms