RNA–Protein interactions for RNA: ENST00000339298.2

SOCS4-201, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 6,667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-201ENST00000339298 SSR1P43307 286 aaKnown RBP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 SAFB2Q14151 953 aaKnown RBP eCLIP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 CREBRFQ8IUR6 639 aa4.07□□□□□ -1.76
SOCS4-201ENST00000339298 STAC3Q96MF2 364 aa4.07□□□□□ -1.76
SOCS4-201ENST00000339298 FOXD4L6Q3SYB3 417 aaPredicted RBP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 FOXD4L3Q6VB84 417 aaPredicted RBP4.07□□□□□ -1.76
SOCS4-201ENST00000339298 TICAM2Q86XR7 235 aa4.07□□□□□ -1.76
SOCS4-201ENST00000339298 SH3BP5O60239 455 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 RSPH4AQ5TD94 716 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 SLKQ9H2G2 1235 aaPredicted RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 NOP58Q9Y2X3 529 aaKnown RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 CCDC180Q9P1Z9 1646 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 TNNT1P13805 278 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 FAM177A1Q8N128 213 aaPredicted RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 CAPN10Q9HC96 672 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 SEMA3FQ13275 785 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 ZNF594Q96JF6 807 aaPredicted RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 CTHP32929 405 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 U3KPZ7 1027 aaPredicted RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 PHF14O94880 888 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 YY1P25490 414 aa4.06□□□□□ -1.76
SOCS4-201ENST00000339298 HMGN5P82970 282 aaKnown RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 DDX27Q96GQ7 796 aaKnown RBP4.06□□□□□ -1.76
SOCS4-201ENST00000339298 HDGFP51858 240 aaKnown RBP4.05□□□□□ -1.76
SOCS4-201ENST00000339298 CEP89Q96ST8 783 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 CLGNO14967 610 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 FYB1O15117 783 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 DEPDC4Q8N2C3 294 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 VTI1BQ9UEU0 232 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 GNL2Q13823 731 aaKnown RBP4.05□□□□□ -1.76
SOCS4-201ENST00000339298 CCDC157Q569K6 752 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 MAP7D2Q96T17 732 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 HSCBQ8IWL3 235 aa4.05□□□□□ -1.76
SOCS4-201ENST00000339298 ERCC5P28715 1186 aaPredicted RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 SLC4A3P48751 1232 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 GLYCTKQ8IVS8 523 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 FAM160A1Q05DH4 1040 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 CHAF1AQ13111 956 aaPredicted RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 SHQ1Q6PI26 577 aaKnown RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 PNMA1Q8ND90 353 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 CCSER2Q9H7U1 834 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 MPHOSPH6Q99547 160 aaKnown RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 PES1O00541 588 aaKnown RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 MAPK1P28482 360 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 ARMCX6Q7L4S7 300 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 DDX11L8A8MPP1 907 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 FTSJ3Q8IY81 847 aaKnown RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 SPIRE2Q8WWL2 714 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 CCDC34Q96HJ3 373 aa4.04□□□□□ -1.76
SOCS4-201ENST00000339298 PNNQ9H307 717 aaKnown RBP4.04□□□□□ -1.76
SOCS4-201ENST00000339298 USP5P45974 858 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 SLC4A8Q2Y0W8 1093 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 FAM161AQ3B820 660 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 PAIP2Q9BPZ3 127 aaKnown RBP4.03□□□□□ -1.76
SOCS4-201ENST00000339298 TRIM34Q9BYJ4 488 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 TBC1D12O60347 775 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 GOLGA6L3A6NEY3 463 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 DNAI2Q9GZS0 605 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 MYH16Q9H6N6 1097 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 ZSWIM4Q9H7M6 989 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 PDE4AP27815 886 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 PDILTQ8N807 584 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 TCEAL9Q9UHQ7 104 aa4.03□□□□□ -1.76
SOCS4-201ENST00000339298 PPP2R5EQ16537 467 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 ZNF467Q7Z7K2 595 aaPredicted RBP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 VPS37AQ8NEZ2 397 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 NECTIN2Q92692 538 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 TRIM55Q9BYV6 548 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 C6orf229H3BNL8 230 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 WDHD1O75717 1129 aaPredicted RBP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 BMS1Q14692 1282 aaKnown RBP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 POLD1P28340 1107 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 IGBP1P78318 339 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 NAP1L4Q99733 375 aaKnown RBP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 BEGAINQ9BUH8 593 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 TBC1D8BQ0IIM8 1120 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 HDGFL1Q5TGJ6 251 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 ZNF771Q7L3S4 317 aaPredicted RBP4.02□□□□□ -1.77
SOCS4-201ENST00000339298 ANKRD13AQ8IZ07 590 aa4.02□□□□□ -1.77
SOCS4-201ENST00000339298 TAF3Q5VWG9 929 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 KAT6BQ8WYB5 2073 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 PPP1R12AO14974 1030 aaPredicted RBP4.01□□□□□ -1.77
SOCS4-201ENST00000339298 CLUL1Q15846 466 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 POM121Q96HA1 1249 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 CARD14Q9BXL6 1004 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 GPS2Q13227 327 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 CHADLQ6NUI6 762 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 DMRT2Q9Y5R5 561 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 PSEN1P49768 467 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 VAC14Q08AM6 782 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 TRIM52Q96A61 297 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 KCNH8Q96L42 1107 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 PICK1Q9NRD5 415 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 DYTNA2CJ06 578 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 RRP9O43818 475 aaKnown RBP4.01□□□□□ -1.77
SOCS4-201ENST00000339298 NEUROD4Q9HD90 331 aa4.01□□□□□ -1.77
SOCS4-201ENST00000339298 HDAC5Q9UQL6 1122 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms