RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 PRR20BP86481 221 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 PRR20AP86496 221 aa8.08□□□□□ -1.12
XRCC4-202ENST00000338635 RBM27Q9P2N5 1060 aaKnown RBP8.08□□□□□ -1.12
XRCC4-202ENST00000338635 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
XRCC4-202ENST00000338635 NPDC1Q9NQX5 325 aaPredicted RBP8.07□□□□□ -1.12
XRCC4-202ENST00000338635 TTC13Q8NBP0 860 aa8.06□□□□□ -1.12
XRCC4-202ENST00000338635 ST8SIA5O15466 376 aa8.05□□□□□ -1.12
XRCC4-202ENST00000338635 APLP1P51693 650 aa8.05□□□□□ -1.12
XRCC4-202ENST00000338635 PADI6Q6TGC4 694 aa8.05□□□□□ -1.12
XRCC4-202ENST00000338635 AAASQ9NRG9 546 aa8.05□□□□□ -1.12
XRCC4-202ENST00000338635 SWT1Q5T5J6 900 aaKnown RBP8.05□□□□□ -1.12
XRCC4-202ENST00000338635 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
XRCC4-202ENST00000338635 ZNF598Q86UK7 904 aaKnown RBP8.04□□□□□ -1.12
XRCC4-202ENST00000338635 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
XRCC4-202ENST00000338635 NFX1Q12986 1120 aaKnown RBP8.02□□□□□ -1.13
XRCC4-202ENST00000338635 SLF2Q8IX21 1173 aa8.01□□□□□ -1.13
XRCC4-202ENST00000338635 NECTIN2Q92692 538 aa8.01□□□□□ -1.13
XRCC4-202ENST00000338635 EYA1Q99502 592 aa8.01□□□□□ -1.13
XRCC4-202ENST00000338635 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
XRCC4-202ENST00000338635 COPS2P61201 443 aa8□□□□□ -1.13
XRCC4-202ENST00000338635 ARHGEF1Q92888 912 aaKnown RBP8□□□□□ -1.13
XRCC4-202ENST00000338635 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
XRCC4-202ENST00000338635 SLC4A3P48751 1232 aa7.99□□□□□ -1.13
XRCC4-202ENST00000338635 TSHZ2Q9NRE2 1034 aa7.99□□□□□ -1.13
XRCC4-202ENST00000338635 TNFRSF10AO00220 468 aa7.98□□□□□ -1.13
XRCC4-202ENST00000338635 GDF9O60383 454 aa7.98□□□□□ -1.13
XRCC4-202ENST00000338635 ZNF697Q5TEC3 545 aa7.98□□□□□ -1.13
XRCC4-202ENST00000338635 C11orf95C9JLR9 678 aaPredicted RBP7.96□□□□□ -1.14
XRCC4-202ENST00000338635 ZPR1O75312 459 aa7.96□□□□□ -1.14
XRCC4-202ENST00000338635 SUZ12Q15022 739 aaKnown RBP7.95□□□□□ -1.14
XRCC4-202ENST00000338635 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
XRCC4-202ENST00000338635 PTGDRQ13258 359 aa7.94□□□□□ -1.14
XRCC4-202ENST00000338635 KCNV2Q8TDN2 545 aa7.94□□□□□ -1.14
XRCC4-202ENST00000338635 PRR14Q9BWN1 585 aa7.94□□□□□ -1.14
XRCC4-202ENST00000338635 GMPR2Q9P2T1 348 aaKnown RBP7.94□□□□□ -1.14
XRCC4-202ENST00000338635 LIAT1Q6ZQX7 453 aa7.93□□□□□ -1.14
XRCC4-202ENST00000338635 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
XRCC4-202ENST00000338635 DNAJB2P25686 324 aa7.93□□□□□ -1.14
XRCC4-202ENST00000338635 CRIPAKQ8N1N5 446 aa7.93□□□□□ -1.14
XRCC4-202ENST00000338635 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
XRCC4-202ENST00000338635 NUTM2FA1L443 756 aa7.92□□□□□ -1.14
XRCC4-202ENST00000338635 FAM181BA6NEQ2 426 aa7.92□□□□□ -1.14
XRCC4-202ENST00000338635 ANKLE1Q8NAG6 615 aa7.92□□□□□ -1.14
XRCC4-202ENST00000338635 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
XRCC4-202ENST00000338635 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
XRCC4-202ENST00000338635 ADGRG1Q9Y653 693 aa7.91□□□□□ -1.14
XRCC4-202ENST00000338635 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
XRCC4-202ENST00000338635 RCCD1A6NED2 376 aa7.89□□□□□ -1.15
XRCC4-202ENST00000338635 FAM161AQ3B820 660 aa7.89□□□□□ -1.15
XRCC4-202ENST00000338635 PPEF1O14829 653 aaPredicted RBP7.88□□□□□ -1.15
XRCC4-202ENST00000338635 AXIN1O15169 862 aa7.87□□□□□ -1.15
XRCC4-202ENST00000338635 ACTN4O43707 911 aaKnown RBP7.87□□□□□ -1.15
XRCC4-202ENST00000338635 KMT5BQ4FZB7 885 aa7.87□□□□□ -1.15
XRCC4-202ENST00000338635 TERTO14746 1132 aaKnown RBP7.86□□□□□ -1.15
XRCC4-202ENST00000338635 FCHSD2O94868 740 aa7.86□□□□□ -1.15
XRCC4-202ENST00000338635 AVPP01185 164 aa7.86□□□□□ -1.15
XRCC4-202ENST00000338635 TLL1O43897 1013 aa7.85□□□□□ -1.15
XRCC4-202ENST00000338635 CFHP08603 1231 aa7.85□□□□□ -1.15
XRCC4-202ENST00000338635 SEMA3EO15041 775 aa7.84□□□□□ -1.15
XRCC4-202ENST00000338635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
XRCC4-202ENST00000338635 SLC10A3P09131 477 aa7.84□□□□□ -1.15
XRCC4-202ENST00000338635 LMOD2Q6P5Q4 547 aa7.84□□□□□ -1.15
XRCC4-202ENST00000338635 S1PR4O95977 384 aa7.83□□□□□ -1.16
XRCC4-202ENST00000338635 FOXC1Q12948 553 aa7.83□□□□□ -1.16
XRCC4-202ENST00000338635 CTC1Q2NKJ3 1217 aa7.83□□□□□ -1.16
XRCC4-202ENST00000338635 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
XRCC4-202ENST00000338635 PKD2L1Q9P0L9 805 aa7.83□□□□□ -1.16
XRCC4-202ENST00000338635 OATP04181 439 aa7.82□□□□□ -1.16
XRCC4-202ENST00000338635 NR1I2O75469 434 aa7.81□□□□□ -1.16
XRCC4-202ENST00000338635 PXYLP1Q8TE99 480 aa7.8□□□□□ -1.16
XRCC4-202ENST00000338635 ADH1BP00325 375 aa7.8□□□□□ -1.16
XRCC4-202ENST00000338635 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
XRCC4-202ENST00000338635 RSPH4AQ5TD94 716 aa7.79□□□□□ -1.16
XRCC4-202ENST00000338635 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
XRCC4-202ENST00000338635 HIC1Q14526 733 aa7.78□□□□□ -1.16
XRCC4-202ENST00000338635 PLA2G2CQ5R387 149 aa7.78□□□□□ -1.16
XRCC4-202ENST00000338635 ZSCAN1Q8NBB4 408 aa7.78□□□□□ -1.16
XRCC4-202ENST00000338635 SLC6A16Q9GZN6 736 aa7.78□□□□□ -1.16
XRCC4-202ENST00000338635 TOR4AQ9NXH8 423 aa7.78□□□□□ -1.16
XRCC4-202ENST00000338635 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
XRCC4-202ENST00000338635 PUS10Q3MIT2 529 aaKnown RBP7.77□□□□□ -1.17
XRCC4-202ENST00000338635 RBM26Q5T8P6 1007 aaKnown RBP7.77□□□□□ -1.17
XRCC4-202ENST00000338635 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
XRCC4-202ENST00000338635 LORP23490 312 aaPredicted RBP7.76□□□□□ -1.17
XRCC4-202ENST00000338635 CYP4X1Q8N118 509 aa7.76□□□□□ -1.17
XRCC4-202ENST00000338635 TESPA1A2RU30 521 aaPredicted RBP7.75□□□□□ -1.17
XRCC4-202ENST00000338635 SMYD5Q6GMV2 418 aa7.75□□□□□ -1.17
XRCC4-202ENST00000338635 FECHP22830 423 aa7.74□□□□□ -1.17
XRCC4-202ENST00000338635 SPSB2Q99619 263 aa7.74□□□□□ -1.17
XRCC4-202ENST00000338635 GNPATO15228 680 aa7.73□□□□□ -1.17
XRCC4-202ENST00000338635 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
XRCC4-202ENST00000338635 TRIM47Q96LD4 638 aa7.73□□□□□ -1.17
XRCC4-202ENST00000338635 ATP13A2Q9NQ11 1180 aa7.73□□□□□ -1.17
XRCC4-202ENST00000338635 DAXXQ9UER7 740 aaPredicted RBP7.73□□□□□ -1.17
XRCC4-202ENST00000338635 RDH13Q8NBN7 331 aa7.72□□□□□ -1.17
XRCC4-202ENST00000338635 SENP2Q9HC62 589 aa7.72□□□□□ -1.17
XRCC4-202ENST00000338635 GMPRP36959 345 aa7.71□□□□□ -1.17
XRCC4-202ENST00000338635 DDX11L8A8MPP1 907 aa7.71□□□□□ -1.18
XRCC4-202ENST00000338635 MORN1Q5T089 497 aa7.7□□□□□ -1.18
XRCC4-202ENST00000338635 FUT2Q10981 343 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms