RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
SPTBN1-201ENST00000333896 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
SPTBN1-201ENST00000333896 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
SPTBN1-201ENST00000333896 TOMM22Q9NS69 142 aa12.51□□□□□ -0.41
SPTBN1-201ENST00000333896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 MYO6Q9UM54 1294 aa12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 ZSCAN30Q86W11 494 aa12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 CGNL1Q0VF96 1302 aa12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
SPTBN1-201ENST00000333896 G3V3G9 751 aa12.49□□□□□ -0.41
SPTBN1-201ENST00000333896 DCAF8Q5TAQ9 597 aa12.49□□□□□ -0.41
SPTBN1-201ENST00000333896 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
SPTBN1-201ENST00000333896 CLGNO14967 610 aa12.49□□□□□ -0.41
SPTBN1-201ENST00000333896 TRAK2O60296 914 aa12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 CLASRPQ8N2M8 674 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 RRP1P56182 461 aaKnown RBP12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 KIF7Q2M1P5 1343 aa12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 GOLGA6L10A6NI86 522 aa12.48□□□□□ -0.41
SPTBN1-201ENST00000333896 REC8O95072 547 aa12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 AKAP17AQ02040 695 aaKnown RBP12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 ERLIN1O75477 346 aa12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
SPTBN1-201ENST00000333896 KIF15Q9NS87 1388 aa12.46□□□□□ -0.41
SPTBN1-201ENST00000333896 KIF20AO95235 890 aa12.46□□□□□ -0.41
SPTBN1-201ENST00000333896 ZFYVE27Q5T4F4 411 aa12.46□□□□□ -0.41
SPTBN1-201ENST00000333896 CGNQ9P2M7 1197 aaKnown RBP12.46□□□□□ -0.42
SPTBN1-201ENST00000333896 SASS6Q6UVJ0 657 aa12.46□□□□□ -0.42
SPTBN1-201ENST00000333896 VPS8Q8N3P4 1428 aa12.45□□□□□ -0.42
SPTBN1-201ENST00000333896 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
SPTBN1-201ENST00000333896 RBM10P98175 930 aaKnown RBP12.45□□□□□ -0.42
SPTBN1-201ENST00000333896 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
SPTBN1-201ENST00000333896 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
SPTBN1-201ENST00000333896 TTLL5Q6EMB2 1281 aa12.44□□□□□ -0.42
SPTBN1-201ENST00000333896 ARHGAP35Q9NRY4 1499 aa12.44□□□□□ -0.42
SPTBN1-201ENST00000333896 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
SPTBN1-201ENST00000333896 BCCIPQ9P287 314 aaKnown RBP eCLIP12.44□□□□□ -0.426e-7■□□□□ 9.3
SPTBN1-201ENST00000333896 EPS15P42566 896 aa12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 POLR3GO15318 223 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 SMAP1Q8IYB5 467 aaPredicted RBP12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 TMF1P82094 1093 aa12.43□□□□□ -0.42
SPTBN1-201ENST00000333896 LUZP1Q86V48 1076 aa12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 WRNQ14191 1432 aaPredicted RBP eCLIP12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 SETSIPP0DME0 302 aa12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 ANKRD30AQ9BXX3 1397 aa12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 CCDC47Q96A33 483 aaKnown RBP12.42□□□□□ -0.42
SPTBN1-201ENST00000333896 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 CENPJQ9HC77 1338 aaPredicted RBP12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 MORC1Q86VD1 984 aa12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 TSPY26PQ9H489 355 aa12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
SPTBN1-201ENST00000333896 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 TXLNBQ8N3L3 684 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 CENPHQ9H3R5 247 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 IVLP07476 585 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 MCM3P25205 808 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 GOLGA6L10A0A0M3HER8 536 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 TRIM29Q14134 588 aa12.4□□□□□ -0.42
SPTBN1-201ENST00000333896 RAD21O60216 631 aa12.4□□□□□ -0.43
SPTBN1-201ENST00000333896 NF2P35240 595 aa12.4□□□□□ -0.43
SPTBN1-201ENST00000333896 KIAA1328Q86T90 577 aa12.4□□□□□ -0.43
SPTBN1-201ENST00000333896 PDILTQ8N807 584 aa12.4□□□□□ -0.43
SPTBN1-201ENST00000333896 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 SLC4A10Q6U841 1118 aa12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 BRD2P25440 801 aaKnown RBP12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 CLCN1P35523 988 aa12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 C11orf95C9JLR9 678 aaPredicted RBP12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 PSMD1Q99460 953 aa12.39□□□□□ -0.43
SPTBN1-201ENST00000333896 MICALCLQ6ZW33 695 aa12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 NINLQ9Y2I6 1382 aa12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 SMC4Q9NTJ3 1288 aa12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 MCM2P49736 904 aa12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 RBM25P49756 843 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
SPTBN1-201ENST00000333896 SYNE3Q6ZMZ3 975 aa12.37□□□□□ -0.43
SPTBN1-201ENST00000333896 RABEP1Q15276 862 aa12.37□□□□□ -0.43
SPTBN1-201ENST00000333896 GBP3Q9H0R5 595 aa12.37□□□□□ -0.43
SPTBN1-201ENST00000333896 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.37□□□□□ -0.43
SPTBN1-201ENST00000333896 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 LIG1P18858 919 aa12.36□□□□□ -0.43
SPTBN1-201ENST00000333896 GPATCH11Q8N954 259 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms