RNA–Protein interactions for RNA: ENST00000332029.2

SOCS1-201, Transcript of suppressor of cytokine signaling 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS1, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS1-201ENST00000332029 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
SOCS1-201ENST00000332029 NKTRP30414 1462 aaKnown RBP32.42■■■□□ 2.78
SOCS1-201ENST00000332029 RBM33Q96EV2 1170 aaKnown RBP32.41■■■□□ 2.78
SOCS1-201ENST00000332029 ROCK1Q13464 1354 aa32.41■■■□□ 2.78
SOCS1-201ENST00000332029 NWD1Q149M9 1564 aa32.41■■■□□ 2.78
SOCS1-201ENST00000332029 PLEKHG1Q9ULL1 1385 aa32.4■■■□□ 2.78
SOCS1-201ENST00000332029 RIMS2Q9UQ26 1411 aa32.4■■■□□ 2.78
SOCS1-201ENST00000332029 GCC2Q8IWJ2 1684 aa32.4■■■□□ 2.78
SOCS1-201ENST00000332029 PPP1R15AO75807 674 aaPredicted RBP32.39■■■□□ 2.78
SOCS1-201ENST00000332029 HDGFP51858 240 aaKnown RBP32.37■■■□□ 2.77
SOCS1-201ENST00000332029 TMEM131LA2VDJ0 1609 aa32.37■■■□□ 2.77
SOCS1-201ENST00000332029 PPARGC1BQ86YN6 1023 aaKnown RBP32.35■■■□□ 2.77
SOCS1-201ENST00000332029 MYO5BQ9ULV0 1848 aa32.33■■■□□ 2.77
SOCS1-201ENST00000332029 CHGAP10645 457 aaKnown RBP32.33■■■□□ 2.77
SOCS1-201ENST00000332029 MSH6P52701 1360 aa32.32■■■□□ 2.76
SOCS1-201ENST00000332029 E9PCH4 1651 aa32.31■■■□□ 2.76
SOCS1-201ENST00000332029 IQGAP3Q86VI3 1631 aa32.3■■■□□ 2.76
SOCS1-201ENST00000332029 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.3■■■□□ 2.76
SOCS1-201ENST00000332029 ROBO1Q9Y6N7 1651 aa32.29■■■□□ 2.76
SOCS1-201ENST00000332029 ITGAEP38570 1179 aa32.28■■■□□ 2.76
SOCS1-201ENST00000332029 NUP155O75694 1391 aa32.28■■■□□ 2.76
SOCS1-201ENST00000332029 TBX22Q9Y458 520 aa32.27■■■□□ 2.76
SOCS1-201ENST00000332029 NUTM2DQ5VT03 806 aaPredicted RBP32.24■■■□□ 2.75
SOCS1-201ENST00000332029 CHD2O14647 1828 aaKnown RBP32.23■■■□□ 2.75
SOCS1-201ENST00000332029 RGS17Q9UGC6 210 aaPredicted RBP32.23■■■□□ 2.75
SOCS1-201ENST00000332029 SLAIN2Q9P270 581 aa32.22■■■□□ 2.75
SOCS1-201ENST00000332029 ADAMTS13Q76LX8 1427 aa32.21■■■□□ 2.75
SOCS1-201ENST00000332029 DIP2AQ14689 1571 aa32.18■■■□□ 2.74
SOCS1-201ENST00000332029 NCOA3Q9Y6Q9 1424 aa32.17■■■□□ 2.74
SOCS1-201ENST00000332029 PIK3R4Q99570 1358 aa32.15■■■□□ 2.74
SOCS1-201ENST00000332029 C14orf37Q86TY3 774 aa32.13■■■□□ 2.73
SOCS1-201ENST00000332029 TRPM2O94759 1503 aa32.09■■■□□ 2.73
SOCS1-201ENST00000332029 PHLPP1O60346 1717 aa32.09■■■□□ 2.73
SOCS1-201ENST00000332029 JCADQ9P266 1359 aa32.07■■■□□ 2.72
SOCS1-201ENST00000332029 C19orf44Q9H6X5 657 aa32.06■■■□□ 2.72
SOCS1-201ENST00000332029 POTEAQ6S8J7 498 aa32.05■■■□□ 2.72
SOCS1-201ENST00000332029 CADPS2Q86UW7 1296 aa32.05■■■□□ 2.72
SOCS1-201ENST00000332029 AMOTL2Q9Y2J4 779 aa32.05■■■□□ 2.72
SOCS1-201ENST00000332029 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
SOCS1-201ENST00000332029 PTPRUQ92729 1446 aa32.04■■■□□ 2.72
SOCS1-201ENST00000332029 SPHKAPQ2M3C7 1700 aa32.03■■■□□ 2.72
SOCS1-201ENST00000332029 ATF3P18847 181 aa32.03■■■□□ 2.72
SOCS1-201ENST00000332029 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.01■■■□□ 2.72
SOCS1-201ENST00000332029 ZNF326Q5BKZ1 582 aaKnown RBP32.01■■■□□ 2.71
SOCS1-201ENST00000332029 COL16A1Q07092 1604 aaPredicted RBP32■■■□□ 2.71
SOCS1-201ENST00000332029 SETBP1Q9Y6X0 1596 aa31.98■■■□□ 2.71
SOCS1-201ENST00000332029 NRXN3Q9Y4C0 1643 aa31.97■■■□□ 2.71
SOCS1-201ENST00000332029 AHDC1Q5TGY3 1603 aaPredicted RBP31.93■■■□□ 2.7
SOCS1-201ENST00000332029 NAIPQ13075 1403 aa31.93■■■□□ 2.7
SOCS1-201ENST00000332029 XRN1Q8IZH2 1706 aaKnown RBP31.93■■■□□ 2.7
SOCS1-201ENST00000332029 DCCP43146 1447 aa31.92■■■□□ 2.7
SOCS1-201ENST00000332029 CLTCL1P53675 1640 aa31.91■■■□□ 2.7
SOCS1-201ENST00000332029 SPATA31A6Q5VVP1 1343 aa31.91■■■□□ 2.7
SOCS1-201ENST00000332029 METP08581 1390 aa31.91■■■□□ 2.7
SOCS1-201ENST00000332029 BRINP3Q76B58 766 aa31.89■■■□□ 2.7
SOCS1-201ENST00000332029 NEXMIFQ5QGS0 1516 aa31.89■■■□□ 2.7
SOCS1-201ENST00000332029 LRP6O75581 1613 aa31.87■■■□□ 2.69
SOCS1-201ENST00000332029 MEX3CQ5U5Q3 659 aaKnown RBP31.84■■■□□ 2.69
SOCS1-201ENST00000332029 ASXL1Q8IXJ9 1541 aa31.82■■■□□ 2.68
SOCS1-201ENST00000332029 SHPRHQ149N8 1683 aa31.82■■■□□ 2.68
SOCS1-201ENST00000332029 MST1RQ04912 1400 aa31.82■■■□□ 2.68
SOCS1-201ENST00000332029 TRIM52Q96A61 297 aa31.81■■■□□ 2.68
SOCS1-201ENST00000332029 HFM1A2PYH4 1435 aa31.8■■■□□ 2.68
SOCS1-201ENST00000332029 ADGRL3Q9HAR2 1447 aa31.79■■■□□ 2.68
SOCS1-201ENST00000332029 KIF1BO60333 1816 aa31.77■■■□□ 2.68
SOCS1-201ENST00000332029 ZNF772Q68DY9 489 aaPredicted RBP31.75■■■□□ 2.67
SOCS1-201ENST00000332029 VGFO15240 615 aaPredicted RBP31.73■■■□□ 2.67
SOCS1-201ENST00000332029 SLC4A1APQ9BWU0 796 aaKnown RBP31.73■■■□□ 2.67
SOCS1-201ENST00000332029 SETD5Q9C0A6 1442 aa31.73■■■□□ 2.67
SOCS1-201ENST00000332029 SETD1AO15047 1707 aaKnown RBP31.72■■■□□ 2.67
SOCS1-201ENST00000332029 NUTM2BA6NNL0 878 aaPredicted RBP31.71■■■□□ 2.67
SOCS1-201ENST00000332029 NUTM2EB1AL46 878 aaPredicted RBP31.71■■■□□ 2.67
SOCS1-201ENST00000332029 NUTM2AQ8IVF1 878 aaPredicted RBP31.71■■■□□ 2.67
SOCS1-201ENST00000332029 NALCNQ8IZF0 1738 aa31.7■■■□□ 2.67
SOCS1-201ENST00000332029 NHSL1Q5SYE7 1610 aa31.7■■■□□ 2.66
SOCS1-201ENST00000332029 PTCH1Q13635 1447 aa31.69■■■□□ 2.66
SOCS1-201ENST00000332029 RPGRIP1LQ68CZ1 1315 aa31.69■■■□□ 2.66
SOCS1-201ENST00000332029 LRRC59Q96AG4 307 aaKnown RBP31.67■■■□□ 2.66
SOCS1-201ENST00000332029 DDX17Q92841 729 aaKnown RBP31.65■■■□□ 2.66
SOCS1-201ENST00000332029 ROBO2Q9HCK4 1378 aa31.65■■■□□ 2.66
SOCS1-201ENST00000332029 C1orf167Q5SNV9 1468 aa31.63■■■□□ 2.65
SOCS1-201ENST00000332029 PRAG1Q86YV5 1406 aa31.62■■■□□ 2.65
SOCS1-201ENST00000332029 PNPLA6Q8IY17 1366 aa31.6■■■□□ 2.65
SOCS1-201ENST00000332029 AFF2P51816 1311 aa31.59■■■□□ 2.65
SOCS1-201ENST00000332029 RXRBP28702 533 aa31.59■■■□□ 2.65
SOCS1-201ENST00000332029 FOXD1Q16676 465 aa31.59■■■□□ 2.65
SOCS1-201ENST00000332029 PPLO60437 1756 aa31.57■■■□□ 2.64
SOCS1-201ENST00000332029 ORAI2Q96SN7 254 aa31.54■■■□□ 2.64
SOCS1-201ENST00000332029 C8orf37Q96NL8 207 aa31.53■■■□□ 2.64
SOCS1-201ENST00000332029 CCDC144AA2RUR9 1427 aa31.52■■■□□ 2.64
SOCS1-201ENST00000332029 CDK12Q9NYV4 1490 aaPredicted RBP31.51■■■□□ 2.63
SOCS1-201ENST00000332029 LAMC1P11047 1609 aa31.5■■■□□ 2.63
SOCS1-201ENST00000332029 UPF1Q92900 1129 aaKnown RBP eCLIP31.5■■■□□ 2.63
SOCS1-201ENST00000332029 SOS2Q07890 1332 aaPredicted RBP31.49■■■□□ 2.63
SOCS1-201ENST00000332029 ADGRF5Q8IZF2 1346 aa31.49■■■□□ 2.63
SOCS1-201ENST00000332029 RGL3Q3MIN7 710 aa31.46■■■□□ 2.63
SOCS1-201ENST00000332029 MPHOSPH9Q99550 1183 aa31.46■■■□□ 2.63
SOCS1-201ENST00000332029 SPATA31E1Q6ZUB1 1445 aa31.45■■■□□ 2.63
SOCS1-201ENST00000332029 ADAMTS2O95450 1211 aa31.44■■■□□ 2.62
SOCS1-201ENST00000332029 QTRT2Q9H974 415 aaKnown RBP31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms