RNA–Protein interactions for RNA: ENST00000323418.10

ME3-201, Transcript of malic enzyme 3, humanhuman

TSL 5 BASIC

Gene ME3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-201ENST00000323418 ITGAEP38570 1179 aa32.5■■■□□ 2.79
ME3-201ENST00000323418 CHD2O14647 1828 aaKnown RBP32.49■■■□□ 2.79
ME3-201ENST00000323418 SPHKAPQ2M3C7 1700 aa32.48■■■□□ 2.79
ME3-201ENST00000323418 NUP155O75694 1391 aa32.47■■■□□ 2.79
ME3-201ENST00000323418 RIMS2Q9UQ26 1411 aa32.47■■■□□ 2.79
ME3-201ENST00000323418 SLC26A8Q96RN1 970 aa32.45■■■□□ 2.79
ME3-201ENST00000323418 MED1Q15648 1581 aaPredicted RBP32.45■■■□□ 2.78
ME3-201ENST00000323418 PLEKHG1Q9ULL1 1385 aa32.45■■■□□ 2.78
ME3-201ENST00000323418 NKTRP30414 1462 aaKnown RBP32.44■■■□□ 2.78
ME3-201ENST00000323418 KCNA6P17658 529 aa32.42■■■□□ 2.78
ME3-201ENST00000323418 TMEM94Q12767 1356 aa32.39■■■□□ 2.78
ME3-201ENST00000323418 NAIPQ13075 1403 aa32.37■■■□□ 2.77
ME3-201ENST00000323418 DIP2AQ14689 1571 aa32.35■■■□□ 2.77
ME3-201ENST00000323418 ADAMTS13Q76LX8 1427 aa32.34■■■□□ 2.77
ME3-201ENST00000323418 CLTCL1P53675 1640 aa32.3■■■□□ 2.76
ME3-201ENST00000323418 NRXN3Q9Y4C0 1643 aa32.3■■■□□ 2.76
ME3-201ENST00000323418 ROBO1Q9Y6N7 1651 aa32.28■■■□□ 2.76
ME3-201ENST00000323418 CHGAP10645 457 aaKnown RBP32.28■■■□□ 2.76
ME3-201ENST00000323418 FAM135BQ49AJ0 1406 aa32.27■■■□□ 2.76
ME3-201ENST00000323418 PPP1R15AO75807 674 aaPredicted RBP32.27■■■□□ 2.76
ME3-201ENST00000323418 HDGFP51858 240 aaKnown RBP32.27■■■□□ 2.76
ME3-201ENST00000323418 PROSER2Q86WR7 435 aaPredicted RBP32.27■■■□□ 2.76
ME3-201ENST00000323418 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.27■■■□□ 2.76
ME3-201ENST00000323418 SENP3Q9H4L4 574 aaPredicted RBP32.27■■■□□ 2.76
ME3-201ENST00000323418 TRPM2O94759 1503 aa32.26■■■□□ 2.76
ME3-201ENST00000323418 RBM33Q96EV2 1170 aaKnown RBP32.26■■■□□ 2.75
ME3-201ENST00000323418 TBX22Q9Y458 520 aa32.26■■■□□ 2.75
ME3-201ENST00000323418 HFM1A2PYH4 1435 aa32.25■■■□□ 2.75
ME3-201ENST00000323418 BCANQ96GW7 911 aa32.24■■■□□ 2.75
ME3-201ENST00000323418 SOCS7O14512 581 aa32.23■■■□□ 2.75
ME3-201ENST00000323418 NUTM2DQ5VT03 806 aaPredicted RBP32.23■■■□□ 2.75
ME3-201ENST00000323418 SETBP1Q9Y6X0 1596 aa32.23■■■□□ 2.75
ME3-201ENST00000323418 KIF1BO60333 1816 aa32.22■■■□□ 2.75
ME3-201ENST00000323418 PIK3R4Q99570 1358 aa32.19■■■□□ 2.74
ME3-201ENST00000323418 XRN1Q8IZH2 1706 aaKnown RBP32.19■■■□□ 2.74
ME3-201ENST00000323418 NEXMIFQ5QGS0 1516 aa32.19■■■□□ 2.74
ME3-201ENST00000323418 PTPRUQ92729 1446 aa32.17■■■□□ 2.74
ME3-201ENST00000323418 MSH6P52701 1360 aa32.16■■■□□ 2.74
ME3-201ENST00000323418 NCOA3Q9Y6Q9 1424 aa32.16■■■□□ 2.74
ME3-201ENST00000323418 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.15■■■□□ 2.74
ME3-201ENST00000323418 SETD1AO15047 1707 aaKnown RBP32.09■■■□□ 2.73
ME3-201ENST00000323418 PHLPP1O60346 1717 aa32.09■■■□□ 2.73
ME3-201ENST00000323418 COL16A1Q07092 1604 aaPredicted RBP32.04■■■□□ 2.72
ME3-201ENST00000323418 SLAIN2Q9P270 581 aa32.03■■■□□ 2.72
ME3-201ENST00000323418 PPLO60437 1756 aa32.03■■■□□ 2.72
ME3-201ENST00000323418 AMOTL2Q9Y2J4 779 aa32.01■■■□□ 2.71
ME3-201ENST00000323418 METP08581 1390 aa32■■■□□ 2.71
ME3-201ENST00000323418 ZNF326Q5BKZ1 582 aaKnown RBP32■■■□□ 2.71
ME3-201ENST00000323418 TRIM52Q96A61 297 aa31.98■■■□□ 2.71
ME3-201ENST00000323418 AHDC1Q5TGY3 1603 aaPredicted RBP31.96■■■□□ 2.71
ME3-201ENST00000323418 NALCNQ8IZF0 1738 aa31.95■■■□□ 2.71
ME3-201ENST00000323418 PHF23Q9BUL5 403 aaPredicted RBP31.95■■■□□ 2.71
ME3-201ENST00000323418 DCCP43146 1447 aa31.94■■■□□ 2.7
ME3-201ENST00000323418 SLC4A1APQ9BWU0 796 aaKnown RBP31.94■■■□□ 2.7
ME3-201ENST00000323418 C19orf44Q9H6X5 657 aa31.94■■■□□ 2.7
ME3-201ENST00000323418 RGS17Q9UGC6 210 aaPredicted RBP31.93■■■□□ 2.7
ME3-201ENST00000323418 IFT172Q9UG01 1749 aa31.91■■■□□ 2.7
ME3-201ENST00000323418 CADPS2Q86UW7 1296 aa31.9■■■□□ 2.7
ME3-201ENST00000323418 C14orf37Q86TY3 774 aa31.89■■■□□ 2.7
ME3-201ENST00000323418 SHPRHQ149N8 1683 aa31.87■■■□□ 2.69
ME3-201ENST00000323418 PRAG1Q86YV5 1406 aa31.86■■■□□ 2.69
ME3-201ENST00000323418 NHSL1Q5SYE7 1610 aa31.86■■■□□ 2.69
ME3-201ENST00000323418 MST1RQ04912 1400 aa31.84■■■□□ 2.69
ME3-201ENST00000323418 ADGRL3Q9HAR2 1447 aa31.84■■■□□ 2.69
ME3-201ENST00000323418 JCADQ9P266 1359 aa31.84■■■□□ 2.69
ME3-201ENST00000323418 ATF3P18847 181 aa31.84■■■□□ 2.69
ME3-201ENST00000323418 FOXD1Q16676 465 aa31.84■■■□□ 2.69
ME3-201ENST00000323418 RPGRIP1LQ68CZ1 1315 aa31.83■■■□□ 2.69
ME3-201ENST00000323418 ASXL1Q8IXJ9 1541 aa31.82■■■□□ 2.68
ME3-201ENST00000323418 PTCH1Q13635 1447 aa31.82■■■□□ 2.68
ME3-201ENST00000323418 SPATA31E1Q6ZUB1 1445 aa31.81■■■□□ 2.68
ME3-201ENST00000323418 VGFO15240 615 aaPredicted RBP31.8■■■□□ 2.68
ME3-201ENST00000323418 BRINP3Q76B58 766 aa31.78■■■□□ 2.68
ME3-201ENST00000323418 LRP6O75581 1613 aa31.78■■■□□ 2.68
ME3-201ENST00000323418 CCDC144AA2RUR9 1427 aa31.76■■■□□ 2.68
ME3-201ENST00000323418 MPHOSPH9Q99550 1183 aa31.76■■■□□ 2.67
ME3-201ENST00000323418 ROBO2Q9HCK4 1378 aa31.74■■■□□ 2.67
ME3-201ENST00000323418 LAMC1P11047 1609 aa31.73■■■□□ 2.67
ME3-201ENST00000323418 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
ME3-201ENST00000323418 POTEAQ6S8J7 498 aa31.7■■■□□ 2.67
ME3-201ENST00000323418 KNDC1Q76NI1 1749 aa31.69■■■□□ 2.66
ME3-201ENST00000323418 SPATA31A6Q5VVP1 1343 aa31.68■■■□□ 2.66
ME3-201ENST00000323418 ADGRF5Q8IZF2 1346 aa31.67■■■□□ 2.66
ME3-201ENST00000323418 C1orf167Q5SNV9 1468 aa31.65■■■□□ 2.66
ME3-201ENST00000323418 ANKRD30BQ9BXX2 1392 aa31.63■■■□□ 2.65
ME3-201ENST00000323418 PIK3C2GO75747 1445 aa31.62■■■□□ 2.65
ME3-201ENST00000323418 CDC42BPGQ6DT37 1551 aa31.62■■■□□ 2.65
ME3-201ENST00000323418 TECPR2O15040 1411 aa31.61■■■□□ 2.65
ME3-201ENST00000323418 ACIN1Q9UKV3 1341 aaKnown RBP31.61■■■□□ 2.65
ME3-201ENST00000323418 RAB3GAP2Q9H2M9 1393 aa31.6■■■□□ 2.65
ME3-201ENST00000323418 RGL3Q3MIN7 710 aa31.58■■■□□ 2.65
ME3-201ENST00000323418 NRXN1Q9ULB1 1477 aa31.57■■■□□ 2.64
ME3-201ENST00000323418 DDX17Q92841 729 aaKnown RBP31.56■■■□□ 2.64
ME3-201ENST00000323418 LRPPRCP42704 1394 aaKnown RBP31.54■■■□□ 2.64
ME3-201ENST00000323418 MYOM2P54296 1465 aa31.53■■■□□ 2.64
ME3-201ENST00000323418 PNPLA6Q8IY17 1366 aa31.52■■■□□ 2.64
ME3-201ENST00000323418 ABCC11Q96J66 1382 aa31.49■■■□□ 2.63
ME3-201ENST00000323418 LRRC59Q96AG4 307 aaKnown RBP31.48■■■□□ 2.63
ME3-201ENST00000323418 ORAI2Q96SN7 254 aa31.48■■■□□ 2.63
ME3-201ENST00000323418 FMN2Q9NZ56 1722 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms