RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
VARS2-201ENST00000321897 MS4A1P11836 297 aa19.28■□□□□ 0.68
VARS2-201ENST00000321897 TCP11L2Q8N4U5 519 aa19.27■□□□□ 0.68
VARS2-201ENST00000321897 PKNOX2Q96KN3 472 aa19.27■□□□□ 0.68
VARS2-201ENST00000321897 TSR2Q969E8 191 aaKnown RBP19.27■□□□□ 0.68
VARS2-201ENST00000321897 CENPQQ7L2Z9 268 aaPredicted RBP19.27■□□□□ 0.67
VARS2-201ENST00000321897 HSCBQ8IWL3 235 aa19.26■□□□□ 0.67
VARS2-201ENST00000321897 E9PSI1 815 aa19.26■□□□□ 0.67
VARS2-201ENST00000321897 RWDD1Q9H446 243 aaPredicted RBP19.26■□□□□ 0.67
VARS2-201ENST00000321897 IFT140Q96RY7 1462 aa19.26■□□□□ 0.67
VARS2-201ENST00000321897 PLCB2Q00722 1185 aa19.25■□□□□ 0.67
VARS2-201ENST00000321897 SLC4A10Q6U841 1118 aa19.25■□□□□ 0.67
VARS2-201ENST00000321897 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
VARS2-201ENST00000321897 RPRD2Q5VT52 1461 aaKnown RBP19.24■□□□□ 0.67
VARS2-201ENST00000321897 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
VARS2-201ENST00000321897 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
VARS2-201ENST00000321897 CGNL1Q0VF96 1302 aa19.22■□□□□ 0.67
VARS2-201ENST00000321897 NECTIN2Q92692 538 aa19.21■□□□□ 0.67
VARS2-201ENST00000321897 NOL8Q76FK4 1167 aaKnown RBP19.21■□□□□ 0.67
VARS2-201ENST00000321897 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
VARS2-201ENST00000321897 RIPK4P57078 832 aa19.21■□□□□ 0.67
VARS2-201ENST00000321897 ROCK1Q13464 1354 aa19.21■□□□□ 0.67
VARS2-201ENST00000321897 GRIN2AQ12879 1464 aa19.19■□□□□ 0.66
VARS2-201ENST00000321897 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
VARS2-201ENST00000321897 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
VARS2-201ENST00000321897 DISP3Q9P2K9 1392 aa19.18■□□□□ 0.66
VARS2-201ENST00000321897 FOXD4L5Q5VV16 416 aaPredicted RBP19.18■□□□□ 0.66
VARS2-201ENST00000321897 FOXD4L4Q8WXT5 416 aaPredicted RBP19.18■□□□□ 0.66
VARS2-201ENST00000321897 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
VARS2-201ENST00000321897 EVC2Q86UK5 1308 aa19.18■□□□□ 0.66
VARS2-201ENST00000321897 FBLN1P23142 703 aa19.17■□□□□ 0.66
VARS2-201ENST00000321897 CUL7Q14999 1698 aa19.17■□□□□ 0.66
VARS2-201ENST00000321897 ANKRD45Q5TZF3 282 aa19.17■□□□□ 0.66
VARS2-201ENST00000321897 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
VARS2-201ENST00000321897 GPATCH8Q9UKJ3 1502 aaKnown RBP19.16■□□□□ 0.66
VARS2-201ENST00000321897 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
VARS2-201ENST00000321897 LAMC3Q9Y6N6 1575 aa19.16■□□□□ 0.66
VARS2-201ENST00000321897 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
VARS2-201ENST00000321897 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
VARS2-201ENST00000321897 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
VARS2-201ENST00000321897 IPO8O15397 1037 aaKnown RBP19.15■□□□□ 0.66
VARS2-201ENST00000321897 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
VARS2-201ENST00000321897 NUP153P49790 1475 aaKnown RBP19.15■□□□□ 0.66
VARS2-201ENST00000321897 C1orf115Q9H7X2 142 aa19.14■□□□□ 0.65
VARS2-201ENST00000321897 RUNDC1Q96C34 613 aa19.14■□□□□ 0.65
VARS2-201ENST00000321897 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
VARS2-201ENST00000321897 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
VARS2-201ENST00000321897 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
VARS2-201ENST00000321897 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
VARS2-201ENST00000321897 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
VARS2-201ENST00000321897 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
VARS2-201ENST00000321897 EXOSC9Q06265 439 aaKnown RBP19.12■□□□□ 0.65
VARS2-201ENST00000321897 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
VARS2-201ENST00000321897 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
VARS2-201ENST00000321897 OS9Q13438 667 aaPredicted RBP19.11■□□□□ 0.65
VARS2-201ENST00000321897 DZIP1LQ8IYY4 767 aaKnown RBP19.11■□□□□ 0.65
VARS2-201ENST00000321897 THUMPD2Q9BTF0 503 aaKnown RBP19.11■□□□□ 0.65
VARS2-201ENST00000321897 DIAPH1O60610 1272 aaKnown RBP19.1■□□□□ 0.65
VARS2-201ENST00000321897 FAM69CQ0P6D2 419 aa19.1■□□□□ 0.65
VARS2-201ENST00000321897 NGDNQ8NEJ9 315 aaKnown RBP19.1■□□□□ 0.65
VARS2-201ENST00000321897 FAM13BQ9NYF5 915 aa19.1■□□□□ 0.65
VARS2-201ENST00000321897 MAGI3Q5TCQ9 1506 aa19.08■□□□□ 0.65
VARS2-201ENST00000321897 UBE2Q2Q8WVN8 375 aa19.08■□□□□ 0.65
VARS2-201ENST00000321897 FAM43AQ8N2R8 423 aa19.08■□□□□ 0.64
VARS2-201ENST00000321897 CABP1Q9NZU7 370 aa19.07■□□□□ 0.64
VARS2-201ENST00000321897 A0A0U1RQG5 324 aaPredicted RBP19.06■□□□□ 0.64
VARS2-201ENST00000321897 GBP4Q96PP9 640 aa19.05■□□□□ 0.64
VARS2-201ENST00000321897 PDZRN3Q9UPQ7 1066 aa19.05■□□□□ 0.64
VARS2-201ENST00000321897 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
VARS2-201ENST00000321897 ATP10BO94823 1461 aa19.04■□□□□ 0.64
VARS2-201ENST00000321897 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
VARS2-201ENST00000321897 AMPHP49418 695 aa19.04■□□□□ 0.64
VARS2-201ENST00000321897 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
VARS2-201ENST00000321897 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
VARS2-201ENST00000321897 CCDC141Q6ZP82 1450 aa19.03■□□□□ 0.64
VARS2-201ENST00000321897 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
VARS2-201ENST00000321897 SLFN5Q08AF3 891 aa19.03■□□□□ 0.64
VARS2-201ENST00000321897 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
VARS2-201ENST00000321897 COG3Q96JB2 828 aa19.02■□□□□ 0.64
VARS2-201ENST00000321897 TRIM6-TRIM34B2RNG4 842 aa19.02■□□□□ 0.63
VARS2-201ENST00000321897 WAPLQ7Z5K2 1190 aa19.01■□□□□ 0.63
VARS2-201ENST00000321897 RBM10P98175 930 aaKnown RBP19.01■□□□□ 0.63
VARS2-201ENST00000321897 TESK2Q96S53 571 aa19.01■□□□□ 0.63
VARS2-201ENST00000321897 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
VARS2-201ENST00000321897 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
VARS2-201ENST00000321897 KCNJ4P48050 445 aa19■□□□□ 0.63
VARS2-201ENST00000321897 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
VARS2-201ENST00000321897 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
VARS2-201ENST00000321897 DHX29Q7Z478 1369 aaKnown RBP18.99■□□□□ 0.63
VARS2-201ENST00000321897 KDM6BO15054 1643 aa18.99■□□□□ 0.63
VARS2-201ENST00000321897 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
VARS2-201ENST00000321897 NOB1Q9ULX3 412 aaKnown RBP18.98■□□□□ 0.63
VARS2-201ENST00000321897 DDX49Q9Y6V7 483 aaKnown RBP18.98■□□□□ 0.63
VARS2-201ENST00000321897 CCDC9Q9Y3X0 531 aaKnown RBP18.98■□□□□ 0.63
VARS2-201ENST00000321897 DCTN1Q14203 1278 aa18.97■□□□□ 0.63
VARS2-201ENST00000321897 NAP1L2Q9ULW6 460 aaPredicted RBP18.97■□□□□ 0.63
VARS2-201ENST00000321897 NSD3Q9BZ95 1437 aa18.97■□□□□ 0.63
VARS2-201ENST00000321897 TRAK2O60296 914 aa18.96■□□□□ 0.63
VARS2-201ENST00000321897 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
VARS2-201ENST00000321897 CFAP43Q8NDM7 1665 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms