RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 UNC13BO14795 1591 aa18.54■□□□□ 0.56
ABCD3-201ENST00000315713 E9PCH4 1651 aa18.53■□□□□ 0.56
ABCD3-201ENST00000315713 SETD1AO15047 1707 aaKnown RBP18.52■□□□□ 0.56
ABCD3-201ENST00000315713 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
ABCD3-201ENST00000315713 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.55
ABCD3-201ENST00000315713 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
ABCD3-201ENST00000315713 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
ABCD3-201ENST00000315713 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
ABCD3-201ENST00000315713 RGS17Q9UGC6 210 aaPredicted RBP18.49■□□□□ 0.55
ABCD3-201ENST00000315713 KCNA6P17658 529 aa18.48■□□□□ 0.55
ABCD3-201ENST00000315713 ANKRD50Q9ULJ7 1429 aa18.48■□□□□ 0.55
ABCD3-201ENST00000315713 IQGAP3Q86VI3 1631 aa18.46■□□□□ 0.55
ABCD3-201ENST00000315713 PROSER2Q86WR7 435 aaPredicted RBP18.46■□□□□ 0.55
ABCD3-201ENST00000315713 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
ABCD3-201ENST00000315713 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
ABCD3-201ENST00000315713 MSH6P52701 1360 aa18.43■□□□□ 0.54
ABCD3-201ENST00000315713 PLEKHG1Q9ULL1 1385 aa18.43■□□□□ 0.54
ABCD3-201ENST00000315713 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.43■□□□□ 0.54
ABCD3-201ENST00000315713 RRBP1Q9P2E9 1410 aaKnown RBP18.43■□□□□ 0.54
ABCD3-201ENST00000315713 ITGAEP38570 1179 aa18.43■□□□□ 0.54
ABCD3-201ENST00000315713 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
ABCD3-201ENST00000315713 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
ABCD3-201ENST00000315713 BCANQ96GW7 911 aa18.41■□□□□ 0.54
ABCD3-201ENST00000315713 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
ABCD3-201ENST00000315713 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
ABCD3-201ENST00000315713 POTEAQ6S8J7 498 aa18.38■□□□□ 0.53
ABCD3-201ENST00000315713 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
ABCD3-201ENST00000315713 AHDC1Q5TGY3 1603 aaPredicted RBP18.36■□□□□ 0.53
ABCD3-201ENST00000315713 ADAMTS13Q76LX8 1427 aa18.36■□□□□ 0.53
ABCD3-201ENST00000315713 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
ABCD3-201ENST00000315713 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
ABCD3-201ENST00000315713 TRPM2O94759 1503 aa18.35■□□□□ 0.53
ABCD3-201ENST00000315713 LRP6O75581 1613 aa18.34■□□□□ 0.53
ABCD3-201ENST00000315713 ROCK1Q13464 1354 aa18.34■□□□□ 0.53
ABCD3-201ENST00000315713 JCADQ9P266 1359 aa18.33■□□□□ 0.53
ABCD3-201ENST00000315713 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
ABCD3-201ENST00000315713 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
ABCD3-201ENST00000315713 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
ABCD3-201ENST00000315713 NCOA3Q9Y6Q9 1424 aa18.3■□□□□ 0.52
ABCD3-201ENST00000315713 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
ABCD3-201ENST00000315713 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
ABCD3-201ENST00000315713 C14orf37Q86TY3 774 aa18.28■□□□□ 0.52
ABCD3-201ENST00000315713 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
ABCD3-201ENST00000315713 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
ABCD3-201ENST00000315713 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
ABCD3-201ENST00000315713 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
ABCD3-201ENST00000315713 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
ABCD3-201ENST00000315713 KIF1BO60333 1816 aa18.27■□□□□ 0.52
ABCD3-201ENST00000315713 PIK3R4Q99570 1358 aa18.27■□□□□ 0.51
ABCD3-201ENST00000315713 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
ABCD3-201ENST00000315713 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
ABCD3-201ENST00000315713 NUP155O75694 1391 aa18.24■□□□□ 0.51
ABCD3-201ENST00000315713 SPATA31A6Q5VVP1 1343 aa18.22■□□□□ 0.51
ABCD3-201ENST00000315713 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
ABCD3-201ENST00000315713 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
ABCD3-201ENST00000315713 DCCP43146 1447 aa18.21■□□□□ 0.51
ABCD3-201ENST00000315713 ATF3P18847 181 aa18.2■□□□□ 0.5
ABCD3-201ENST00000315713 MEX3CQ5U5Q3 659 aaKnown RBP18.19■□□□□ 0.5
ABCD3-201ENST00000315713 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
ABCD3-201ENST00000315713 AMOTL2Q9Y2J4 779 aa18.19■□□□□ 0.5
ABCD3-201ENST00000315713 MST1RQ04912 1400 aa18.18■□□□□ 0.5
ABCD3-201ENST00000315713 NAIPQ13075 1403 aa18.18■□□□□ 0.5
ABCD3-201ENST00000315713 HFM1A2PYH4 1435 aa18.17■□□□□ 0.5
ABCD3-201ENST00000315713 BRINP3Q76B58 766 aa18.17■□□□□ 0.5
ABCD3-201ENST00000315713 METP08581 1390 aa18.15■□□□□ 0.5
ABCD3-201ENST00000315713 PPLO60437 1756 aa18.14■□□□□ 0.49
ABCD3-201ENST00000315713 ADGRL3Q9HAR2 1447 aa18.14■□□□□ 0.49
ABCD3-201ENST00000315713 TRIM52Q96A61 297 aa18.13■□□□□ 0.49
ABCD3-201ENST00000315713 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
ABCD3-201ENST00000315713 LAMC1P11047 1609 aa18.12■□□□□ 0.49
ABCD3-201ENST00000315713 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
ABCD3-201ENST00000315713 NUTM2BA6NNL0 878 aaPredicted RBP18.11■□□□□ 0.49
ABCD3-201ENST00000315713 NUTM2EB1AL46 878 aaPredicted RBP18.11■□□□□ 0.49
ABCD3-201ENST00000315713 ZNF326Q5BKZ1 582 aaKnown RBP18.11■□□□□ 0.49
ABCD3-201ENST00000315713 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
ABCD3-201ENST00000315713 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
ABCD3-201ENST00000315713 AFF2P51816 1311 aa18.07■□□□□ 0.48
ABCD3-201ENST00000315713 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
ABCD3-201ENST00000315713 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
ABCD3-201ENST00000315713 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
ABCD3-201ENST00000315713 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
ABCD3-201ENST00000315713 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
ABCD3-201ENST00000315713 RGS12O14924 1447 aa18.05■□□□□ 0.48
ABCD3-201ENST00000315713 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
ABCD3-201ENST00000315713 COL22A1Q8NFW1 1626 aaPredicted RBP18.03■□□□□ 0.48
ABCD3-201ENST00000315713 RXRBP28702 533 aa18.03■□□□□ 0.48
ABCD3-201ENST00000315713 IFT172Q9UG01 1749 aa18.03■□□□□ 0.48
ABCD3-201ENST00000315713 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
ABCD3-201ENST00000315713 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
ABCD3-201ENST00000315713 C8orf37Q96NL8 207 aa18■□□□□ 0.47
ABCD3-201ENST00000315713 LRRC59Q96AG4 307 aaKnown RBP17.99■□□□□ 0.47
ABCD3-201ENST00000315713 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
ABCD3-201ENST00000315713 EP400Q96L91 3159 aa17.99■□□□□ 0.47
ABCD3-201ENST00000315713 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
ABCD3-201ENST00000315713 KNDC1Q76NI1 1749 aa17.98■□□□□ 0.47
ABCD3-201ENST00000315713 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
ABCD3-201ENST00000315713 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
ABCD3-201ENST00000315713 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
ABCD3-201ENST00000315713 RGPD8O14715 1765 aaPredicted RBP17.94■□□□□ 0.46
ABCD3-201ENST00000315713 FMN2Q9NZ56 1722 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms