RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 HSPA1LP34931 641 aa43.89■■■■■ 4.62
H2AFV-202ENST00000308153 XIRP1Q702N8 1843 aaKnown RBP43.89■■■■■ 4.62
H2AFV-202ENST00000308153 NAIPQ13075 1403 aa43.87■■■■■ 4.61
H2AFV-202ENST00000308153 PLEKHG1Q9ULL1 1385 aa43.85■■■■■ 4.61
H2AFV-202ENST00000308153 KCNA6P17658 529 aa43.84■■■■■ 4.61
H2AFV-202ENST00000308153 CHGAP10645 457 aaKnown RBP43.81■■■■■ 4.6
H2AFV-202ENST00000308153 NWD1Q149M9 1564 aa43.8■■■■■ 4.6
H2AFV-202ENST00000308153 HDGFP51858 240 aaKnown RBP43.78■■■■■ 4.6
H2AFV-202ENST00000308153 PPP1R15AO75807 674 aaPredicted RBP43.76■■■■■ 4.6
H2AFV-202ENST00000308153 BCANQ96GW7 911 aa43.76■■■■■ 4.6
H2AFV-202ENST00000308153 SENP3Q9H4L4 574 aaPredicted RBP43.76■■■■■ 4.6
H2AFV-202ENST00000308153 TMEM94Q12767 1356 aa43.76■■■■■ 4.6
H2AFV-202ENST00000308153 SPHKAPQ2M3C7 1700 aa43.75■■■■■ 4.59
H2AFV-202ENST00000308153 NKTRP30414 1462 aaKnown RBP43.74■■■■■ 4.59
H2AFV-202ENST00000308153 ABCF1Q8NE71 845 aaKnown RBP eCLIP43.73■■■■■ 4.59
H2AFV-202ENST00000308153 HFM1A2PYH4 1435 aa43.72■■■■■ 4.59
H2AFV-202ENST00000308153 ILDR2Q71H61 639 aa43.7■■■■■ 4.59
H2AFV-202ENST00000308153 NUTM2DQ5VT03 806 aaPredicted RBP43.68■■■■■ 4.58
H2AFV-202ENST00000308153 PROSER2Q86WR7 435 aaPredicted RBP43.67■■■■■ 4.58
H2AFV-202ENST00000308153 ADAMTS13Q76LX8 1427 aa43.66■■■■■ 4.58
H2AFV-202ENST00000308153 CHD2O14647 1828 aaKnown RBP43.66■■■■■ 4.58
H2AFV-202ENST00000308153 TBX22Q9Y458 520 aa43.65■■■■■ 4.58
H2AFV-202ENST00000308153 RBM33Q96EV2 1170 aaKnown RBP43.64■■■■■ 4.58
H2AFV-202ENST00000308153 DIP2AQ14689 1571 aa43.6■■■■■ 4.57
H2AFV-202ENST00000308153 TRPM2O94759 1503 aa43.59■■■■■ 4.57
H2AFV-202ENST00000308153 CLTCL1P53675 1640 aa43.57■■■■■ 4.57
H2AFV-202ENST00000308153 MED1Q15648 1581 aaPredicted RBP43.55■■■■■ 4.56
H2AFV-202ENST00000308153 FAM135BQ49AJ0 1406 aa43.53■■■■■ 4.56
H2AFV-202ENST00000308153 TRIM52Q96A61 297 aa43.51■■■■■ 4.56
H2AFV-202ENST00000308153 PIK3R4Q99570 1358 aa43.51■■■■■ 4.56
H2AFV-202ENST00000308153 NRXN3Q9Y4C0 1643 aa43.48■■■■■ 4.55
H2AFV-202ENST00000308153 MSH6P52701 1360 aa43.47■■■■■ 4.55
H2AFV-202ENST00000308153 SETBP1Q9Y6X0 1596 aa43.46■■■■■ 4.55
H2AFV-202ENST00000308153 ZNF326Q5BKZ1 582 aaKnown RBP43.45■■■■■ 4.55
H2AFV-202ENST00000308153 NEXMIFQ5QGS0 1516 aa43.43■■■■■ 4.54
H2AFV-202ENST00000308153 PTPRUQ92729 1446 aa43.42■■■■■ 4.54
H2AFV-202ENST00000308153 NCOA3Q9Y6Q9 1424 aa43.42■■■■■ 4.54
H2AFV-202ENST00000308153 ROBO1Q9Y6N7 1651 aa43.41■■■■■ 4.54
H2AFV-202ENST00000308153 SLC4A1APQ9BWU0 796 aaKnown RBP43.41■■■■■ 4.54
H2AFV-202ENST00000308153 KIF1BO60333 1816 aa43.38■■■■■ 4.54
H2AFV-202ENST00000308153 AMOTL2Q9Y2J4 779 aa43.34■■■■■ 4.53
H2AFV-202ENST00000308153 XRN1Q8IZH2 1706 aaKnown RBP43.31■■■■■ 4.52
H2AFV-202ENST00000308153 SOCS7O14512 581 aa43.31■■■■■ 4.52
H2AFV-202ENST00000308153 SLAIN2Q9P270 581 aa43.31■■■■■ 4.52
H2AFV-202ENST00000308153 METP08581 1390 aa43.29■■■■■ 4.52
H2AFV-202ENST00000308153 SIPA1L2Q9P2F8 1722 aaPredicted RBP43.25■■■■■ 4.51
H2AFV-202ENST00000308153 C14orf37Q86TY3 774 aa43.24■■■■■ 4.51
H2AFV-202ENST00000308153 FOXD1Q16676 465 aa43.23■■■■■ 4.51
H2AFV-202ENST00000308153 C19orf44Q9H6X5 657 aa43.23■■■■■ 4.51
H2AFV-202ENST00000308153 CADPS2Q86UW7 1296 aa43.17■■■■■ 4.5
H2AFV-202ENST00000308153 MPHOSPH9Q99550 1183 aa43.15■■■■■ 4.5
H2AFV-202ENST00000308153 PHF23Q9BUL5 403 aaPredicted RBP43.15■■■■■ 4.5
H2AFV-202ENST00000308153 RPGRIP1LQ68CZ1 1315 aa43.15■■■■■ 4.5
H2AFV-202ENST00000308153 VGFO15240 615 aaPredicted RBP43.14■■■■■ 4.5
H2AFV-202ENST00000308153 ATF3P18847 181 aa43.13■■■■■ 4.49
H2AFV-202ENST00000308153 SETD1AO15047 1707 aaKnown RBP43.12■■■■■ 4.49
H2AFV-202ENST00000308153 PHLPP1O60346 1717 aa43.12■■■■■ 4.49
H2AFV-202ENST00000308153 PPLO60437 1756 aa43.11■■■■■ 4.49
H2AFV-202ENST00000308153 DCCP43146 1447 aa43.11■■■■■ 4.49
H2AFV-202ENST00000308153 CCDC144AA2RUR9 1427 aa43.08■■■■■ 4.49
H2AFV-202ENST00000308153 SETD5Q9C0A6 1442 aa43.07■■■■■ 4.49
H2AFV-202ENST00000308153 COL16A1Q07092 1604 aaPredicted RBP43.05■■■■■ 4.48
H2AFV-202ENST00000308153 SPATA31E1Q6ZUB1 1445 aa43.03■■■■■ 4.48
H2AFV-202ENST00000308153 AHDC1Q5TGY3 1603 aaPredicted RBP43■■■■■ 4.47
H2AFV-202ENST00000308153 ADGRL3Q9HAR2 1447 aa43■■■■■ 4.47
H2AFV-202ENST00000308153 RGS17Q9UGC6 210 aaPredicted RBP42.99■■■■■ 4.47
H2AFV-202ENST00000308153 ACIN1Q9UKV3 1341 aaKnown RBP42.98■■■■■ 4.47
H2AFV-202ENST00000308153 PTCH1Q13635 1447 aa42.98■■■■■ 4.47
H2AFV-202ENST00000308153 MST1RQ04912 1400 aa42.97■■■■■ 4.47
H2AFV-202ENST00000308153 PRAG1Q86YV5 1406 aa42.97■■■■■ 4.47
H2AFV-202ENST00000308153 NALCNQ8IZF0 1738 aa42.97■■■■■ 4.47
H2AFV-202ENST00000308153 JCADQ9P266 1359 aa42.97■■■■■ 4.47
H2AFV-202ENST00000308153 BRINP3Q76B58 766 aa42.96■■■■■ 4.47
H2AFV-202ENST00000308153 ROBO2Q9HCK4 1378 aa42.93■■■■■ 4.46
H2AFV-202ENST00000308153 RAB3GAP2Q9H2M9 1393 aa42.92■■■■■ 4.46
H2AFV-202ENST00000308153 IFT172Q9UG01 1749 aa42.92■■■■■ 4.46
H2AFV-202ENST00000308153 RGL3Q3MIN7 710 aa42.92■■■■■ 4.46
H2AFV-202ENST00000308153 ADGRF5Q8IZF2 1346 aa42.92■■■■■ 4.46
H2AFV-202ENST00000308153 ASXL1Q8IXJ9 1541 aa42.9■■■■■ 4.46
H2AFV-202ENST00000308153 ANKRD30BQ9BXX2 1392 aa42.86■■■■■ 4.45
H2AFV-202ENST00000308153 NHSL1Q5SYE7 1610 aa42.79■■■■■ 4.44
H2AFV-202ENST00000308153 SHPRHQ149N8 1683 aa42.79■■■■■ 4.44
H2AFV-202ENST00000308153 PIK3C2GO75747 1445 aa42.78■■■■■ 4.44
H2AFV-202ENST00000308153 SPATA31A6Q5VVP1 1343 aa42.76■■■■■ 4.44
H2AFV-202ENST00000308153 LRP6O75581 1613 aa42.76■■■■■ 4.44
H2AFV-202ENST00000308153 C1orf167Q5SNV9 1468 aa42.75■■■■■ 4.43
H2AFV-202ENST00000308153 POTEAQ6S8J7 498 aa42.73■■■■■ 4.43
H2AFV-202ENST00000308153 TECPR2O15040 1411 aa42.71■■■■■ 4.43
H2AFV-202ENST00000308153 LRPPRCP42704 1394 aaKnown RBP42.67■■■■■ 4.42
H2AFV-202ENST00000308153 DDX17Q92841 729 aaKnown RBP42.67■■■■■ 4.42
H2AFV-202ENST00000308153 NRXN1Q9ULB1 1477 aa42.67■■■■■ 4.42
H2AFV-202ENST00000308153 TMEM132EQ6IEE7 984 aa42.64■■■■■ 4.42
H2AFV-202ENST00000308153 MYOM2P54296 1465 aa42.63■■■■■ 4.42
H2AFV-202ENST00000308153 STK26Q9P289 416 aa42.63■■■■■ 4.41
H2AFV-202ENST00000308153 ABCC11Q96J66 1382 aa42.63■■■■■ 4.41
H2AFV-202ENST00000308153 KNDC1Q76NI1 1749 aa42.63■■■■■ 4.41
H2AFV-202ENST00000308153 CDC42BPGQ6DT37 1551 aa42.62■■■■■ 4.41
H2AFV-202ENST00000308153 LAMC1P11047 1609 aa42.62■■■■■ 4.41
H2AFV-202ENST00000308153 HRCP23327 699 aa42.6■■■■■ 4.41
H2AFV-202ENST00000308153 ORAI2Q96SN7 254 aa42.6■■■■■ 4.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms