RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
SYNPO2-201ENST00000307142 HSCBQ8IWL3 235 aa13.42□□□□□ -0.26
SYNPO2-201ENST00000307142 PTMAP06454 111 aaKnown RBP13.42□□□□□ -0.26
SYNPO2-201ENST00000307142 VPS37DQ86XT2 251 aa13.42□□□□□ -0.26
SYNPO2-201ENST00000307142 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
SYNPO2-201ENST00000307142 PHLDB1Q86UU1 1377 aa13.41□□□□□ -0.26
SYNPO2-201ENST00000307142 HSP90B1P14625 803 aaKnown RBP13.41□□□□□ -0.26
SYNPO2-201ENST00000307142 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
SYNPO2-201ENST00000307142 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
SYNPO2-201ENST00000307142 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 HMOX1P09601 288 aa13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 KIF14Q15058 1648 aa13.4□□□□□ -0.26
SYNPO2-201ENST00000307142 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
SYNPO2-201ENST00000307142 ANP32EQ9BTT0 268 aa13.39□□□□□ -0.27
SYNPO2-201ENST00000307142 TRIM44Q96DX7 344 aaPredicted RBP13.39□□□□□ -0.27
SYNPO2-201ENST00000307142 KIAA0586Q9BVV6 1533 aa13.39□□□□□ -0.27
SYNPO2-201ENST00000307142 RAD21O60216 631 aa13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 TROQ12816 1431 aaPredicted RBP13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
SYNPO2-201ENST00000307142 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
SYNPO2-201ENST00000307142 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 RIPK4P57078 832 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 CTDP1Q9Y5B0 961 aaPredicted RBP13.36□□□□□ -0.27
SYNPO2-201ENST00000307142 AMOTL1Q8IY63 956 aa13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 GOLGA6L6A8MZA4 724 aa13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 XPCQ01831 940 aaPredicted RBP13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 SLC52A1Q9NWF4 448 aa13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 AIMP1Q12904 312 aaKnown RBP13.35□□□□□ -0.27
SYNPO2-201ENST00000307142 ABCA10Q8WWZ4 1543 aa13.34□□□□□ -0.27
SYNPO2-201ENST00000307142 CDK19Q9BWU1 502 aa13.34□□□□□ -0.27
SYNPO2-201ENST00000307142 CWC22Q9HCG8 908 aaKnown RBP13.34□□□□□ -0.27
SYNPO2-201ENST00000307142 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
SYNPO2-201ENST00000307142 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
SYNPO2-201ENST00000307142 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
SYNPO2-201ENST00000307142 RIC3Q7Z5B4 369 aa13.33□□□□□ -0.28
SYNPO2-201ENST00000307142 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
SYNPO2-201ENST00000307142 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
SYNPO2-201ENST00000307142 ADGRL1O94910 1474 aa13.32□□□□□ -0.28
SYNPO2-201ENST00000307142 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
SYNPO2-201ENST00000307142 URB2Q14146 1524 aaKnown RBP13.32□□□□□ -0.28
SYNPO2-201ENST00000307142 WASHC2AQ641Q2 1341 aa13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 TCERG1O14776 1098 aaKnown RBP13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 MARCH6O60337 910 aa13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 RILPL2Q969X0 211 aa13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
SYNPO2-201ENST00000307142 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 PLEKHO1Q53GL0 409 aaPredicted RBP13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 KIF21AQ7Z4S6 1674 aa13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 CEBPAP49715 358 aaPredicted RBP13.3□□□□□ -0.28
SYNPO2-201ENST00000307142 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
SYNPO2-201ENST00000307142 DNTTIP2Q5QJE6 756 aaKnown RBP13.29□□□□□ -0.28
SYNPO2-201ENST00000307142 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 APAF1O14727 1248 aa13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 KAT6BQ8WYB5 2073 aa13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 E9PSI1 815 aa13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
SYNPO2-201ENST00000307142 PLIN1O60240 522 aa13.27□□□□□ -0.28
SYNPO2-201ENST00000307142 ADAMTS2O95450 1211 aa13.27□□□□□ -0.28
SYNPO2-201ENST00000307142 APPP05067 770 aa13.27□□□□□ -0.28
SYNPO2-201ENST00000307142 MFAP1P55081 439 aaKnown RBP13.27□□□□□ -0.28
SYNPO2-201ENST00000307142 CABP4P57796 275 aa13.27□□□□□ -0.29
SYNPO2-201ENST00000307142 LRRFIP1Q32MZ4 808 aaKnown RBP13.27□□□□□ -0.29
SYNPO2-201ENST00000307142 SAMD1Q6SPF0 538 aaPredicted RBP13.26□□□□□ -0.29
SYNPO2-201ENST00000307142 RUNDC1Q96C34 613 aa13.26□□□□□ -0.29
SYNPO2-201ENST00000307142 TCEAL9Q9UHQ7 104 aa13.26□□□□□ -0.29
SYNPO2-201ENST00000307142 CABP1Q9NZU7 370 aa13.26□□□□□ -0.29
SYNPO2-201ENST00000307142 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
SYNPO2-201ENST00000307142 DAPK1P53355 1430 aa13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 AKNAQ7Z591 1439 aa13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 PCF11O94913 1555 aaKnown RBP13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
SYNPO2-201ENST00000307142 G3BP1Q13283 466 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 NRDCO43847 1150 aa13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 DRC7Q8IY82 874 aa13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 ZC3H6P61129 1189 aaKnown RBP13.24□□□□□ -0.29
SYNPO2-201ENST00000307142 GAS2L2Q8NHY3 880 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms