RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 NWD1Q149M9 1564 aa24.84■■□□□ 1.57
RECQL4-201ENST00000301323 CLTCL1P53675 1640 aa24.83■■□□□ 1.56
RECQL4-201ENST00000301323 PLEKHG1Q9ULL1 1385 aa24.82■■□□□ 1.56
RECQL4-201ENST00000301323 XIRP1Q702N8 1843 aaKnown RBP24.82■■□□□ 1.56
RECQL4-201ENST00000301323 ILDR2Q71H61 639 aa24.79■■□□□ 1.56
RECQL4-201ENST00000301323 SLC26A8Q96RN1 970 aa24.77■■□□□ 1.56
RECQL4-201ENST00000301323 NKTRP30414 1462 aaKnown RBP24.77■■□□□ 1.56
RECQL4-201ENST00000301323 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
RECQL4-201ENST00000301323 DIP2AQ14689 1571 aa24.76■■□□□ 1.55
RECQL4-201ENST00000301323 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
RECQL4-201ENST00000301323 ADAMTS13Q76LX8 1427 aa24.73■■□□□ 1.55
RECQL4-201ENST00000301323 PPP1R15AO75807 674 aaPredicted RBP24.73■■□□□ 1.55
RECQL4-201ENST00000301323 TOM1O60784 492 aa24.72■■□□□ 1.55
RECQL4-201ENST00000301323 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.72■■□□□ 1.55
RECQL4-201ENST00000301323 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
RECQL4-201ENST00000301323 NRXN3Q9Y4C0 1643 aa24.72■■□□□ 1.55
RECQL4-201ENST00000301323 KCNA6P17658 529 aa24.71■■□□□ 1.55
RECQL4-201ENST00000301323 HDGFP51858 240 aaKnown RBP24.71■■□□□ 1.55
RECQL4-201ENST00000301323 PIP4K2BP78356 416 aa24.7■■□□□ 1.54
RECQL4-201ENST00000301323 TRIM52Q96A61 297 aa24.7■■□□□ 1.54
RECQL4-201ENST00000301323 NEXMIFQ5QGS0 1516 aa24.7■■□□□ 1.54
RECQL4-201ENST00000301323 KIF1BO60333 1816 aa24.7■■□□□ 1.54
RECQL4-201ENST00000301323 SETBP1Q9Y6X0 1596 aa24.69■■□□□ 1.54
RECQL4-201ENST00000301323 TMEM94Q12767 1356 aa24.67■■□□□ 1.54
RECQL4-201ENST00000301323 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
RECQL4-201ENST00000301323 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
RECQL4-201ENST00000301323 SENP3Q9H4L4 574 aaPredicted RBP24.67■■□□□ 1.54
RECQL4-201ENST00000301323 BCANQ96GW7 911 aa24.66■■□□□ 1.54
RECQL4-201ENST00000301323 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
RECQL4-201ENST00000301323 HSPA1LP34931 641 aa24.62■■□□□ 1.53
RECQL4-201ENST00000301323 PIK3R4Q99570 1358 aa24.62■■□□□ 1.53
RECQL4-201ENST00000301323 SETD5Q9C0A6 1442 aa24.61■■□□□ 1.53
RECQL4-201ENST00000301323 SOCS7O14512 581 aa24.6■■□□□ 1.53
RECQL4-201ENST00000301323 XRN1Q8IZH2 1706 aaKnown RBP24.6■■□□□ 1.53
RECQL4-201ENST00000301323 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
RECQL4-201ENST00000301323 PROSER2Q86WR7 435 aaPredicted RBP24.57■■□□□ 1.52
RECQL4-201ENST00000301323 PTPRUQ92729 1446 aa24.57■■□□□ 1.52
RECQL4-201ENST00000301323 FOXD1Q16676 465 aa24.56■■□□□ 1.52
RECQL4-201ENST00000301323 RBM33Q96EV2 1170 aaKnown RBP24.56■■□□□ 1.52
RECQL4-201ENST00000301323 PPLO60437 1756 aa24.56■■□□□ 1.52
RECQL4-201ENST00000301323 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
RECQL4-201ENST00000301323 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
RECQL4-201ENST00000301323 MPHOSPH9Q99550 1183 aa24.54■■□□□ 1.52
RECQL4-201ENST00000301323 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
RECQL4-201ENST00000301323 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
RECQL4-201ENST00000301323 NCOA3Q9Y6Q9 1424 aa24.52■■□□□ 1.52
RECQL4-201ENST00000301323 MSH6P52701 1360 aa24.52■■□□□ 1.52
RECQL4-201ENST00000301323 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
RECQL4-201ENST00000301323 SPATA31E1Q6ZUB1 1445 aa24.51■■□□□ 1.51
RECQL4-201ENST00000301323 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
RECQL4-201ENST00000301323 METP08581 1390 aa24.5■■□□□ 1.51
RECQL4-201ENST00000301323 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
RECQL4-201ENST00000301323 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
RECQL4-201ENST00000301323 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.47■■□□□ 1.51
RECQL4-201ENST00000301323 RPGRIP1LQ68CZ1 1315 aa24.47■■□□□ 1.51
RECQL4-201ENST00000301323 AMOTL2Q9Y2J4 779 aa24.46■■□□□ 1.51
RECQL4-201ENST00000301323 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
RECQL4-201ENST00000301323 VGFO15240 615 aaPredicted RBP24.42■■□□□ 1.5
RECQL4-201ENST00000301323 DCCP43146 1447 aa24.4■■□□□ 1.5
RECQL4-201ENST00000301323 NALCNQ8IZF0 1738 aa24.4■■□□□ 1.5
RECQL4-201ENST00000301323 PTCH1Q13635 1447 aa24.39■■□□□ 1.5
RECQL4-201ENST00000301323 C14orf37Q86TY3 774 aa24.36■■□□□ 1.49
RECQL4-201ENST00000301323 C19orf44Q9H6X5 657 aa24.36■■□□□ 1.49
RECQL4-201ENST00000301323 SLAIN2Q9P270 581 aa24.36■■□□□ 1.49
RECQL4-201ENST00000301323 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
RECQL4-201ENST00000301323 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
RECQL4-201ENST00000301323 PHF23Q9BUL5 403 aaPredicted RBP24.35■■□□□ 1.49
RECQL4-201ENST00000301323 ASXL1Q8IXJ9 1541 aa24.35■■□□□ 1.49
RECQL4-201ENST00000301323 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
RECQL4-201ENST00000301323 ADGRF5Q8IZF2 1346 aa24.34■■□□□ 1.49
RECQL4-201ENST00000301323 PHLPP1O60346 1717 aa24.33■■□□□ 1.49
RECQL4-201ENST00000301323 CADPS2Q86UW7 1296 aa24.33■■□□□ 1.49
RECQL4-201ENST00000301323 COL16A1Q07092 1604 aaPredicted RBP24.32■■□□□ 1.48
RECQL4-201ENST00000301323 RGL3Q3MIN7 710 aa24.32■■□□□ 1.48
RECQL4-201ENST00000301323 MYOM2P54296 1465 aa24.32■■□□□ 1.48
RECQL4-201ENST00000301323 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
RECQL4-201ENST00000301323 HRCP23327 699 aa24.31■■□□□ 1.48
RECQL4-201ENST00000301323 AHDC1Q5TGY3 1603 aaPredicted RBP24.31■■□□□ 1.48
RECQL4-201ENST00000301323 NRXN1Q9ULB1 1477 aa24.31■■□□□ 1.48
RECQL4-201ENST00000301323 MST1RQ04912 1400 aa24.3■■□□□ 1.48
RECQL4-201ENST00000301323 ATF3P18847 181 aa24.29■■□□□ 1.48
RECQL4-201ENST00000301323 KNDC1Q76NI1 1749 aa24.28■■□□□ 1.48
RECQL4-201ENST00000301323 TECPR2O15040 1411 aa24.27■■□□□ 1.48
RECQL4-201ENST00000301323 LAMC1P11047 1609 aa24.26■■□□□ 1.47
RECQL4-201ENST00000301323 NHSL1Q5SYE7 1610 aa24.24■■□□□ 1.47
RECQL4-201ENST00000301323 CDC42BPGQ6DT37 1551 aa24.22■■□□□ 1.47
RECQL4-201ENST00000301323 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
RECQL4-201ENST00000301323 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
RECQL4-201ENST00000301323 JCADQ9P266 1359 aa24.18■■□□□ 1.46
RECQL4-201ENST00000301323 SHPRHQ149N8 1683 aa24.18■■□□□ 1.46
RECQL4-201ENST00000301323 ABCC11Q96J66 1382 aa24.17■■□□□ 1.46
RECQL4-201ENST00000301323 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
RECQL4-201ENST00000301323 YTHDC2Q9H6S0 1430 aaKnown RBP24.17■■□□□ 1.46
RECQL4-201ENST00000301323 TMEM132EQ6IEE7 984 aa24.14■■□□□ 1.45
RECQL4-201ENST00000301323 C14orf93Q9H972 538 aaKnown RBP24.14■■□□□ 1.45
RECQL4-201ENST00000301323 ADGRB1O14514 1584 aa24.13■■□□□ 1.45
RECQL4-201ENST00000301323 PLEKHH1Q9ULM0 1364 aa24.12■■□□□ 1.45
RECQL4-201ENST00000301323 STK26Q9P289 416 aa24.11■■□□□ 1.45
RECQL4-201ENST00000301323 LRP6O75581 1613 aa24.1■■□□□ 1.45
RECQL4-201ENST00000301323 DHX57Q6P158 1386 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms