RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.22
GCN1-201ENST00000300648 TXLNBQ8N3L3 684 aa13.71□□□□□ -0.22
GCN1-201ENST00000300648 MBD3O95983 291 aa13.71□□□□□ -0.22
GCN1-201ENST00000300648 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.22
GCN1-201ENST00000300648 SASS6Q6UVJ0 657 aa13.7□□□□□ -0.22
GCN1-201ENST00000300648 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
GCN1-201ENST00000300648 ZRSR2Q15696 482 aaKnown RBP13.69□□□□□ -0.22
GCN1-201ENST00000300648 USP8P40818 1118 aa13.69□□□□□ -0.22
GCN1-201ENST00000300648 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 MCM2P49736 904 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 GOLGA6L7A0A1B0GV03 622 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 INTS3Q68E01 1043 aaKnown RBP13.68□□□□□ -0.22
GCN1-201ENST00000300648 CHMP3Q9Y3E7 222 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 PDIA4P13667 645 aaKnown RBP13.68□□□□□ -0.22
GCN1-201ENST00000300648 CCDC73Q6ZRK6 1079 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 KIF21BO75037 1637 aa13.68□□□□□ -0.22
GCN1-201ENST00000300648 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
GCN1-201ENST00000300648 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
GCN1-201ENST00000300648 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
GCN1-201ENST00000300648 HSP90AB4PQ58FF6 505 aa13.67□□□□□ -0.22
GCN1-201ENST00000300648 NINLQ9Y2I6 1382 aa13.67□□□□□ -0.22
GCN1-201ENST00000300648 H0YHG0 523 aa13.67□□□□□ -0.22
GCN1-201ENST00000300648 TCEAL9Q9UHQ7 104 aa13.67□□□□□ -0.22
GCN1-201ENST00000300648 ZNF592Q92610 1267 aa13.67□□□□□ -0.22
GCN1-201ENST00000300648 NASPP49321 788 aaPredicted RBP13.66□□□□□ -0.22
GCN1-201ENST00000300648 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
GCN1-201ENST00000300648 LEKR1Q6ZMV7 388 aa13.66□□□□□ -0.22
GCN1-201ENST00000300648 PDCP20941 246 aa13.66□□□□□ -0.22
GCN1-201ENST00000300648 CPLX1O14810 134 aa13.66□□□□□ -0.22
GCN1-201ENST00000300648 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
GCN1-201ENST00000300648 NEXNQ0ZGT2 675 aa13.66□□□□□ -0.22
GCN1-201ENST00000300648 SENP3-EIF4A1A0A087X0R7 540 aa13.65□□□□□ -0.22
GCN1-201ENST00000300648 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
GCN1-201ENST00000300648 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
GCN1-201ENST00000300648 IFT57Q9NWB7 429 aa13.65□□□□□ -0.22
GCN1-201ENST00000300648 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.65□□□□□ -0.22
GCN1-201ENST00000300648 TRDNQ13061 729 aa13.65□□□□□ -0.23
GCN1-201ENST00000300648 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
GCN1-201ENST00000300648 NOL10Q9BSC4 688 aaKnown RBP13.64□□□□□ -0.23
GCN1-201ENST00000300648 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.64□□□□□ -0.23
GCN1-201ENST00000300648 API5Q9BZZ5 524 aaKnown RBP13.64□□□□□ -0.23
GCN1-201ENST00000300648 INCENPQ9NQS7 918 aa13.64□□□□□ -0.23
GCN1-201ENST00000300648 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
GCN1-201ENST00000300648 ERC2O15083 957 aa13.63□□□□□ -0.23
GCN1-201ENST00000300648 PCMTD1Q96MG8 357 aaPredicted RBP13.63□□□□□ -0.23
GCN1-201ENST00000300648 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
GCN1-201ENST00000300648 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
GCN1-201ENST00000300648 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
GCN1-201ENST00000300648 MCTP1Q6DN14 999 aa13.63□□□□□ -0.23
GCN1-201ENST00000300648 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 STK11IPQ8N1F8 1099 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 BRMS1Q9HCU9 246 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 IQCEQ6IPM2 695 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
GCN1-201ENST00000300648 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 XBP1P17861 261 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 PSMA5P28066 241 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 WASHC2CQ9Y4E1 1318 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 ERLIN2O94905 339 aa13.61□□□□□ -0.23
GCN1-201ENST00000300648 G3V3G9 751 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 CSB-PGBD3P0DP91 1061 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
GCN1-201ENST00000300648 ERICH2A1L162 156 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 GOLGA6L10A6NI86 522 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 RILPL2Q969X0 211 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 RABEP1Q15276 862 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 ODF2Q5BJF6 829 aa13.6□□□□□ -0.23
GCN1-201ENST00000300648 CNTLNQ9NXG0 1405 aa13.59□□□□□ -0.23
GCN1-201ENST00000300648 USP47Q96K76 1375 aa13.59□□□□□ -0.23
GCN1-201ENST00000300648 RRP9O43818 475 aaKnown RBP13.59□□□□□ -0.23
GCN1-201ENST00000300648 CT47A1Q5JQC4 288 aaPredicted RBP13.59□□□□□ -0.23
GCN1-201ENST00000300648 ANKRD18AQ8IVF6 992 aa13.59□□□□□ -0.23
GCN1-201ENST00000300648 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
GCN1-201ENST00000300648 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
GCN1-201ENST00000300648 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
GCN1-201ENST00000300648 NOL8Q76FK4 1167 aaKnown RBP13.59□□□□□ -0.23
GCN1-201ENST00000300648 GGT6Q6P531 493 aa13.58□□□□□ -0.23
GCN1-201ENST00000300648 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
GCN1-201ENST00000300648 ERLIN1O75477 346 aa13.58□□□□□ -0.24
GCN1-201ENST00000300648 HIP1O00291 1037 aa13.58□□□□□ -0.24
GCN1-201ENST00000300648 FYCO1Q9BQS8 1478 aa13.58□□□□□ -0.24
GCN1-201ENST00000300648 KIAA0754O94854 1291 aa13.58□□□□□ -0.24
GCN1-201ENST00000300648 EPS15P42566 896 aa13.57□□□□□ -0.24
GCN1-201ENST00000300648 RRBP1Q9P2E9 1410 aaKnown RBP13.57□□□□□ -0.24
GCN1-201ENST00000300648 PATL2C9JE40 543 aaKnown RBP13.57□□□□□ -0.24
GCN1-201ENST00000300648 AMPHP49418 695 aa13.57□□□□□ -0.24
GCN1-201ENST00000300648 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
GCN1-201ENST00000300648 DZIP1LQ8IYY4 767 aaKnown RBP13.57□□□□□ -0.24
GCN1-201ENST00000300648 ANO2Q9NQ90 1003 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms