RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
TRIM44-201ENST00000299413 CSPP1Q1MSJ5 1256 aa12.21□□□□□ -0.45
TRIM44-201ENST00000299413 NLRP2Q9NX02 1062 aa12.21□□□□□ -0.46
TRIM44-201ENST00000299413 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.46
TRIM44-201ENST00000299413 NEXNQ0ZGT2 675 aa12.21□□□□□ -0.46
TRIM44-201ENST00000299413 CECR2Q9BXF3 1484 aa12.2□□□□□ -0.46
TRIM44-201ENST00000299413 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
TRIM44-201ENST00000299413 CPLX1O14810 134 aa12.2□□□□□ -0.46
TRIM44-201ENST00000299413 CENPJQ9HC77 1338 aaPredicted RBP12.2□□□□□ -0.46
TRIM44-201ENST00000299413 SKIDA1Q1XH10 827 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 ST18O60284 1047 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 ABCC8Q09428 1581 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 TPM1P09493 284 aa12.19□□□□□ -0.46
TRIM44-201ENST00000299413 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
TRIM44-201ENST00000299413 IFIT2P09913 472 aaKnown RBP12.18□□□□□ -0.46
TRIM44-201ENST00000299413 EEA1Q15075 1411 aa12.18□□□□□ -0.46
TRIM44-201ENST00000299413 GRM1Q13255 1194 aa12.18□□□□□ -0.46
TRIM44-201ENST00000299413 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
TRIM44-201ENST00000299413 TTLL5Q6EMB2 1281 aa12.18□□□□□ -0.46
TRIM44-201ENST00000299413 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
TRIM44-201ENST00000299413 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
TRIM44-201ENST00000299413 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
TRIM44-201ENST00000299413 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
TRIM44-201ENST00000299413 HDAC5Q9UQL6 1122 aa12.17□□□□□ -0.46
TRIM44-201ENST00000299413 FHAD1B1AJZ9 1412 aa12.17□□□□□ -0.46
TRIM44-201ENST00000299413 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 ERICH2A1L162 156 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 BECN2A8MW95 431 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 PMFBP1Q8TBY8 1022 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 WWC2Q6AWC2 1192 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
TRIM44-201ENST00000299413 HMOX1P09601 288 aa12.15□□□□□ -0.46
TRIM44-201ENST00000299413 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
TRIM44-201ENST00000299413 PHF14O94880 888 aa12.15□□□□□ -0.46
TRIM44-201ENST00000299413 FAM69CQ0P6D2 419 aa12.15□□□□□ -0.46
TRIM44-201ENST00000299413 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
TRIM44-201ENST00000299413 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
TRIM44-201ENST00000299413 TDRD9Q8NDG6 1382 aaKnown RBP12.15□□□□□ -0.47
TRIM44-201ENST00000299413 TRDNQ13061 729 aa12.15□□□□□ -0.47
TRIM44-201ENST00000299413 CHMP4AQ9BY43 222 aa12.14□□□□□ -0.47
TRIM44-201ENST00000299413 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
TRIM44-201ENST00000299413 ANKRD30AQ9BXX3 1397 aa12.13□□□□□ -0.47
TRIM44-201ENST00000299413 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
TRIM44-201ENST00000299413 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.477e-7■■□□□ 14
TRIM44-201ENST00000299413 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
TRIM44-201ENST00000299413 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
TRIM44-201ENST00000299413 CFAP65Q6ZU64 1925 aaKnown RBP12.12□□□□□ -0.47
TRIM44-201ENST00000299413 ATP2B1P20020 1258 aa12.12□□□□□ -0.47
TRIM44-201ENST00000299413 CCDC70Q6NSX1 233 aa12.12□□□□□ -0.47
TRIM44-201ENST00000299413 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
TRIM44-201ENST00000299413 AK7Q96M32 723 aa12.12□□□□□ -0.47
TRIM44-201ENST00000299413 PTMSP20962 102 aa12.12□□□□□ -0.47
TRIM44-201ENST00000299413 PANK3Q9H999 370 aa12.11□□□□□ -0.47
TRIM44-201ENST00000299413 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
TRIM44-201ENST00000299413 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
TRIM44-201ENST00000299413 CCDC47Q96A33 483 aaKnown RBP12.11□□□□□ -0.47
TRIM44-201ENST00000299413 MATR3P43243 847 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■□ 23.8
TRIM44-201ENST00000299413 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
TRIM44-201ENST00000299413 BICD2Q8TD16 824 aa12.11□□□□□ -0.47
TRIM44-201ENST00000299413 FKBP5Q13451 457 aaPredicted RBP12.11□□□□□ -0.47
TRIM44-201ENST00000299413 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
TRIM44-201ENST00000299413 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
TRIM44-201ENST00000299413 TSPYL4Q9UJ04 414 aa12.1□□□□□ -0.47
TRIM44-201ENST00000299413 RAPGEF4Q8WZA2 1011 aa12.1□□□□□ -0.47
TRIM44-201ENST00000299413 IPO7O95373 1038 aaKnown RBP12.09□□□□□ -0.47
TRIM44-201ENST00000299413 RALBP1Q15311 655 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 PIBF1Q8WXW3 757 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 ZHX3Q9H4I2 956 aa12.09□□□□□ -0.47
TRIM44-201ENST00000299413 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.47
TRIM44-201ENST00000299413 LRRFIP1Q32MZ4 808 aaKnown RBP12.08□□□□□ -0.48
TRIM44-201ENST00000299413 KANK4Q5T7N3 995 aaPredicted RBP12.08□□□□□ -0.48
TRIM44-201ENST00000299413 HOMER1Q86YM7 354 aa12.08□□□□□ -0.48
TRIM44-201ENST00000299413 PDILTQ8N807 584 aa12.08□□□□□ -0.48
TRIM44-201ENST00000299413 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 SOGA1O94964 1423 aa12.07□□□□□ -0.48
TRIM44-201ENST00000299413 OFD1O75665 1012 aa12.07□□□□□ -0.48
TRIM44-201ENST00000299413 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 CA8P35219 290 aa12.07□□□□□ -0.48
TRIM44-201ENST00000299413 SETD1BQ9UPS6 1966 aaKnown RBP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
TRIM44-201ENST00000299413 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
TRIM44-201ENST00000299413 FAM161AQ3B820 660 aa12.07□□□□□ -0.48
TRIM44-201ENST00000299413 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
TRIM44-201ENST00000299413 DNAJC2Q99543 621 aaKnown RBP12.06□□□□□ -0.48
TRIM44-201ENST00000299413 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
TRIM44-201ENST00000299413 RALYLQ86SE5 291 aaKnown RBP12.06□□□□□ -0.48
TRIM44-201ENST00000299413 ABTB2Q8N961 1025 aa12.05□□□□□ -0.48
TRIM44-201ENST00000299413 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRIM44-201ENST00000299413 RUFY2Q8WXA3 655 aa12.05□□□□□ -0.48
TRIM44-201ENST00000299413 CDK5RAP3Q96JB5 506 aa12.05□□□□□ -0.48
TRIM44-201ENST00000299413 KRT18P05783 430 aaKnown RBP12.05□□□□□ -0.48
TRIM44-201ENST00000299413 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
TRIM44-201ENST00000299413 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms