RNA–Protein interactions for RNA: ENST00000296088.11

SNRK-201, Transcript of SNF related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRK, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-201ENST00000296088 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
SNRK-201ENST00000296088 EIF3JO75822 258 aaKnown RBP15.07■□□□□ 0
SNRK-201ENST00000296088 SMARCE1Q969G3 411 aa15.07■□□□□ 0
SNRK-201ENST00000296088 R3HCC1Q9Y3T6 440 aaKnown RBP15.07■□□□□ 0
SNRK-201ENST00000296088 NASPP49321 788 aaPredicted RBP15.07■□□□□ 0
SNRK-201ENST00000296088 FOXD4L5Q5VV16 416 aaPredicted RBP15.07■□□□□ 0
SNRK-201ENST00000296088 PDCL2Q8N4E4 241 aa15.07■□□□□ 0
SNRK-201ENST00000296088 FOXD4L4Q8WXT5 416 aaPredicted RBP15.07■□□□□ 0
SNRK-201ENST00000296088 DEF6Q9H4E7 631 aa15.07■□□□□ 0
SNRK-201ENST00000296088 KIF15Q9NS87 1388 aa15.06■□□□□ 0
SNRK-201ENST00000296088 NAP1L1P55209 391 aaKnown RBP15.06■□□□□ 0
SNRK-201ENST00000296088 ERLIN1O75477 346 aa15.06■□□□□ 0
SNRK-201ENST00000296088 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
SNRK-201ENST00000296088 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
SNRK-201ENST00000296088 SMC3Q9UQE7 1217 aa15.06■□□□□ 0
SNRK-201ENST00000296088 OFD1O75665 1012 aa15.05■□□□□ 0
SNRK-201ENST00000296088 TRDNQ13061 729 aa15.05■□□□□ 0
SNRK-201ENST00000296088 GOLGA6L10A6NI86 522 aa15.05■□□□□ -0
SNRK-201ENST00000296088 FRAT2O75474 233 aaPredicted RBP15.05■□□□□ -0
SNRK-201ENST00000296088 RILPL2Q969X0 211 aa15.05■□□□□ -0
SNRK-201ENST00000296088 SENP3Q9H4L4 574 aaPredicted RBP15.04■□□□□ -0
SNRK-201ENST00000296088 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
SNRK-201ENST00000296088 NOL10Q9BSC4 688 aaKnown RBP15.04■□□□□ -0
SNRK-201ENST00000296088 HSP90AB3PQ58FF7 597 aa15.04■□□□□ -0
SNRK-201ENST00000296088 MYBBP1AQ9BQG0 1328 aaKnown RBP15.04■□□□□ -0
SNRK-201ENST00000296088 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
SNRK-201ENST00000296088 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
SNRK-201ENST00000296088 LUC7LQ9NQ29 371 aaKnown RBP15.03■□□□□ -0
SNRK-201ENST00000296088 RRP9O43818 475 aaKnown RBP15.03■□□□□ -0
SNRK-201ENST00000296088 HSP90AB4PQ58FF6 505 aa15.03■□□□□ -0
SNRK-201ENST00000296088 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
SNRK-201ENST00000296088 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
SNRK-201ENST00000296088 CLUAP1Q96AJ1 413 aa15.03■□□□□ -0
SNRK-201ENST00000296088 RRP1P56182 461 aaKnown RBP15.02■□□□□ -0
SNRK-201ENST00000296088 PODXL2Q9NZ53 605 aa15.02■□□□□ -0
SNRK-201ENST00000296088 EZRP15311 586 aaKnown RBP15.02■□□□□ -0
SNRK-201ENST00000296088 FILIP1LQ4L180 1135 aa15.02■□□□□ -0
SNRK-201ENST00000296088 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.02■□□□□ -03e-6■■■■■ 80.1
SNRK-201ENST00000296088 ZBED9Q6R2W3 1325 aa15.02■□□□□ -0
SNRK-201ENST00000296088 WRNQ14191 1432 aaPredicted RBP eCLIP15.02□□□□□ -0.01
SNRK-201ENST00000296088 DYDC1Q8WWB3 177 aa15.01□□□□□ -0.01
SNRK-201ENST00000296088 API5Q9BZZ5 524 aaKnown RBP15.01□□□□□ -0.01
SNRK-201ENST00000296088 MCM2P49736 904 aa15.01□□□□□ -0.01
SNRK-201ENST00000296088 AXDND1Q5T1B0 1012 aaPredicted RBP15.01□□□□□ -0.01
SNRK-201ENST00000296088 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.01□□□□□ -0.01
SNRK-201ENST00000296088 ERICH2A1L162 156 aa15□□□□□ -0.01
SNRK-201ENST00000296088 BRMS1Q9HCU9 246 aa15□□□□□ -0.01
SNRK-201ENST00000296088 ANO2Q9NQ90 1003 aa15□□□□□ -0.01
SNRK-201ENST00000296088 XBP1P17861 261 aa14.99□□□□□ -0.01
SNRK-201ENST00000296088 KRI1Q8N9T8 703 aaKnown RBP14.99□□□□□ -0.01
SNRK-201ENST00000296088 CCDC43Q96MW1 224 aaKnown RBP14.99□□□□□ -0.01
SNRK-201ENST00000296088 SOX12O15370 315 aa14.99□□□□□ -0.01
SNRK-201ENST00000296088 IQCEQ6IPM2 695 aa14.99□□□□□ -0.01
SNRK-201ENST00000296088 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
SNRK-201ENST00000296088 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
SNRK-201ENST00000296088 EPS15P42566 896 aa14.98□□□□□ -0.01
SNRK-201ENST00000296088 PDCP20941 246 aa14.98□□□□□ -0.01
SNRK-201ENST00000296088 PKD2Q13563 968 aa14.98□□□□□ -0.01
SNRK-201ENST00000296088 NEFHP12036 1026 aa14.98□□□□□ -0.01
SNRK-201ENST00000296088 CTDP1Q9Y5B0 961 aaPredicted RBP14.97□□□□□ -0.01
SNRK-201ENST00000296088 ERC2O15083 957 aa14.97□□□□□ -0.01
SNRK-201ENST00000296088 PLCD4Q9BRC7 762 aa14.97□□□□□ -0.01
SNRK-201ENST00000296088 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
SNRK-201ENST00000296088 PSMA5P28066 241 aa14.96□□□□□ -0.01
SNRK-201ENST00000296088 GTF2E1P29083 439 aaPredicted RBP14.96□□□□□ -0.02
SNRK-201ENST00000296088 SDF4Q9BRK5 362 aa14.96□□□□□ -0.02
SNRK-201ENST00000296088 TRIM5Q9C035 493 aa14.96□□□□□ -0.02
SNRK-201ENST00000296088 TSPY26PQ9H489 355 aa14.96□□□□□ -0.02
SNRK-201ENST00000296088 IFIT2P09913 472 aaKnown RBP14.95□□□□□ -0.02
SNRK-201ENST00000296088 NFKBIBQ15653 356 aa14.95□□□□□ -0.02
SNRK-201ENST00000296088 FAM107BQ9H098 131 aa14.95□□□□□ -0.02
SNRK-201ENST00000296088 ZNHIT6Q9NWK9 470 aaKnown RBP14.95□□□□□ -0.02
SNRK-201ENST00000296088 CCDC112Q8NEF3 446 aa14.95□□□□□ -0.02
SNRK-201ENST00000296088 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 GIMAP7Q8NHV1 300 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 GBP3Q9H0R5 595 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 PDIA4P13667 645 aaKnown RBP14.94□□□□□ -0.02
SNRK-201ENST00000296088 SEPT7Q16181 437 aaKnown RBP14.94□□□□□ -0.02
SNRK-201ENST00000296088 DACH1Q9UI36 760 aa14.94□□□□□ -0.02
SNRK-201ENST00000296088 PDILTQ8N807 584 aa14.93□□□□□ -0.02
SNRK-201ENST00000296088 SOGA1O94964 1423 aa14.93□□□□□ -0.02
SNRK-201ENST00000296088 KINO60870 393 aaKnown RBP14.93□□□□□ -0.02
SNRK-201ENST00000296088 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
SNRK-201ENST00000296088 KIF2AO00139 706 aaPredicted RBP14.93□□□□□ -0.02
SNRK-201ENST00000296088 MAGEC2Q9UBF1 373 aaPredicted RBP14.92□□□□□ -0.02
SNRK-201ENST00000296088 ANKRD30AQ9BXX3 1397 aa14.92□□□□□ -0.02
SNRK-201ENST00000296088 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
SNRK-201ENST00000296088 RB1CC1Q8TDY2 1594 aa14.92□□□□□ -0.02
SNRK-201ENST00000296088 TRAK2O60296 914 aa14.91□□□□□ -0.02
SNRK-201ENST00000296088 FOXD4L6Q3SYB3 417 aaPredicted RBP14.91□□□□□ -0.02
SNRK-201ENST00000296088 FOXD4L3Q6VB84 417 aaPredicted RBP14.91□□□□□ -0.02
SNRK-201ENST00000296088 NFXL1Q6ZNB6 911 aa14.91□□□□□ -0.02
SNRK-201ENST00000296088 DDX58O95786 925 aaKnown RBP14.91□□□□□ -0.02
SNRK-201ENST00000296088 CDC45O75419 566 aa14.91□□□□□ -0.02
SNRK-201ENST00000296088 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
SNRK-201ENST00000296088 JMYQ8N9B5 988 aa14.91□□□□□ -0.02
SNRK-201ENST00000296088 RALYLQ86SE5 291 aaKnown RBP14.9□□□□□ -0.02
SNRK-201ENST00000296088 ZNF396Q96N95 335 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms