RNA–Protein interactions for RNA: ENST00000296029.3

PF4-201, Transcript of platelet factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4-201ENST00000296029 XIRP1Q702N8 1843 aaKnown RBP25.87■■□□□ 1.73
PF4-201ENST00000296029 KCNA6P17658 529 aa25.86■■□□□ 1.73
PF4-201ENST00000296029 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
PF4-201ENST00000296029 HDGFP51858 240 aaKnown RBP25.85■■□□□ 1.73
PF4-201ENST00000296029 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
PF4-201ENST00000296029 HSPA1LP34931 641 aa25.84■■□□□ 1.73
PF4-201ENST00000296029 NWD1Q149M9 1564 aa25.84■■□□□ 1.73
PF4-201ENST00000296029 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
PF4-201ENST00000296029 SPHKAPQ2M3C7 1700 aa25.83■■□□□ 1.72
PF4-201ENST00000296029 CHGAP10645 457 aaKnown RBP25.82■■□□□ 1.72
PF4-201ENST00000296029 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.82■■□□□ 1.72
PF4-201ENST00000296029 NKTRP30414 1462 aaKnown RBP25.8■■□□□ 1.72
PF4-201ENST00000296029 PPP1R15AO75807 674 aaPredicted RBP25.8■■□□□ 1.72
PF4-201ENST00000296029 TMEM94Q12767 1356 aa25.8■■□□□ 1.72
PF4-201ENST00000296029 BCANQ96GW7 911 aa25.77■■□□□ 1.72
PF4-201ENST00000296029 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
PF4-201ENST00000296029 ADAMTS13Q76LX8 1427 aa25.76■■□□□ 1.71
PF4-201ENST00000296029 CHD2O14647 1828 aaKnown RBP25.75■■□□□ 1.71
PF4-201ENST00000296029 TRPM2O94759 1503 aa25.74■■□□□ 1.71
PF4-201ENST00000296029 PROSER2Q86WR7 435 aaPredicted RBP25.74■■□□□ 1.71
PF4-201ENST00000296029 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
PF4-201ENST00000296029 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
PF4-201ENST00000296029 NUTM2DQ5VT03 806 aaPredicted RBP25.72■■□□□ 1.71
PF4-201ENST00000296029 CLTCL1P53675 1640 aa25.71■■□□□ 1.71
PF4-201ENST00000296029 PIK3R4Q99570 1358 aa25.69■■□□□ 1.7
PF4-201ENST00000296029 ILDR2Q71H61 639 aa25.68■■□□□ 1.7
PF4-201ENST00000296029 RBM33Q96EV2 1170 aaKnown RBP25.68■■□□□ 1.7
PF4-201ENST00000296029 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
PF4-201ENST00000296029 TRIM52Q96A61 297 aa25.66■■□□□ 1.7
PF4-201ENST00000296029 SETBP1Q9Y6X0 1596 aa25.65■■□□□ 1.7
PF4-201ENST00000296029 NRXN3Q9Y4C0 1643 aa25.65■■□□□ 1.7
PF4-201ENST00000296029 MED1Q15648 1581 aaPredicted RBP25.64■■□□□ 1.69
PF4-201ENST00000296029 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
PF4-201ENST00000296029 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
PF4-201ENST00000296029 MSH6P52701 1360 aa25.62■■□□□ 1.69
PF4-201ENST00000296029 SLC4A1APQ9BWU0 796 aaKnown RBP25.62■■□□□ 1.69
PF4-201ENST00000296029 ZNF326Q5BKZ1 582 aaKnown RBP25.61■■□□□ 1.69
PF4-201ENST00000296029 KIF1BO60333 1816 aa25.6■■□□□ 1.69
PF4-201ENST00000296029 PTPRUQ92729 1446 aa25.6■■□□□ 1.69
PF4-201ENST00000296029 ROBO1Q9Y6N7 1651 aa25.58■■□□□ 1.68
PF4-201ENST00000296029 AMOTL2Q9Y2J4 779 aa25.56■■□□□ 1.68
PF4-201ENST00000296029 XRN1Q8IZH2 1706 aaKnown RBP25.56■■□□□ 1.68
PF4-201ENST00000296029 SLAIN2Q9P270 581 aa25.54■■□□□ 1.68
PF4-201ENST00000296029 METP08581 1390 aa25.53■■□□□ 1.68
PF4-201ENST00000296029 RPGRIP1LQ68CZ1 1315 aa25.5■■□□□ 1.67
PF4-201ENST00000296029 C19orf44Q9H6X5 657 aa25.5■■□□□ 1.67
PF4-201ENST00000296029 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.5■■□□□ 1.67
PF4-201ENST00000296029 FOXD1Q16676 465 aa25.49■■□□□ 1.67
PF4-201ENST00000296029 SOCS7O14512 581 aa25.48■■□□□ 1.67
PF4-201ENST00000296029 VGFO15240 615 aaPredicted RBP25.48■■□□□ 1.67
PF4-201ENST00000296029 MPHOSPH9Q99550 1183 aa25.48■■□□□ 1.67
PF4-201ENST00000296029 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
PF4-201ENST00000296029 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
PF4-201ENST00000296029 CADPS2Q86UW7 1296 aa25.46■■□□□ 1.67
PF4-201ENST00000296029 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
PF4-201ENST00000296029 PPLO60437 1756 aa25.45■■□□□ 1.66
PF4-201ENST00000296029 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.66
PF4-201ENST00000296029 DCCP43146 1447 aa25.45■■□□□ 1.66
PF4-201ENST00000296029 CCDC144AA2RUR9 1427 aa25.44■■□□□ 1.66
PF4-201ENST00000296029 ATF3P18847 181 aa25.42■■□□□ 1.66
PF4-201ENST00000296029 SPATA31E1Q6ZUB1 1445 aa25.42■■□□□ 1.66
PF4-201ENST00000296029 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
PF4-201ENST00000296029 PRAG1Q86YV5 1406 aa25.39■■□□□ 1.66
PF4-201ENST00000296029 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
PF4-201ENST00000296029 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
PF4-201ENST00000296029 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
PF4-201ENST00000296029 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
PF4-201ENST00000296029 AHDC1Q5TGY3 1603 aaPredicted RBP25.37■■□□□ 1.65
PF4-201ENST00000296029 RAB3GAP2Q9H2M9 1393 aa25.36■■□□□ 1.65
PF4-201ENST00000296029 IFT172Q9UG01 1749 aa25.34■■□□□ 1.65
PF4-201ENST00000296029 MST1RQ04912 1400 aa25.34■■□□□ 1.65
PF4-201ENST00000296029 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
PF4-201ENST00000296029 JCADQ9P266 1359 aa25.33■■□□□ 1.65
PF4-201ENST00000296029 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
PF4-201ENST00000296029 ROBO2Q9HCK4 1378 aa25.32■■□□□ 1.64
PF4-201ENST00000296029 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
PF4-201ENST00000296029 ADGRF5Q8IZF2 1346 aa25.32■■□□□ 1.64
PF4-201ENST00000296029 RGL3Q3MIN7 710 aa25.31■■□□□ 1.64
PF4-201ENST00000296029 RGS17Q9UGC6 210 aaPredicted RBP25.31■■□□□ 1.64
PF4-201ENST00000296029 ASXL1Q8IXJ9 1541 aa25.29■■□□□ 1.64
PF4-201ENST00000296029 PIK3C2GO75747 1445 aa25.26■■□□□ 1.63
PF4-201ENST00000296029 NHSL1Q5SYE7 1610 aa25.24■■□□□ 1.63
PF4-201ENST00000296029 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
PF4-201ENST00000296029 HRCP23327 699 aa25.23■■□□□ 1.63
PF4-201ENST00000296029 TECPR2O15040 1411 aa25.22■■□□□ 1.63
PF4-201ENST00000296029 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
PF4-201ENST00000296029 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
PF4-201ENST00000296029 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
PF4-201ENST00000296029 LRPPRCP42704 1394 aaKnown RBP25.19■■□□□ 1.62
PF4-201ENST00000296029 MYOM2P54296 1465 aa25.19■■□□□ 1.62
PF4-201ENST00000296029 LRP6O75581 1613 aa25.19■■□□□ 1.62
PF4-201ENST00000296029 ABCC11Q96J66 1382 aa25.18■■□□□ 1.62
PF4-201ENST00000296029 LAMC1P11047 1609 aa25.17■■□□□ 1.62
PF4-201ENST00000296029 KNDC1Q76NI1 1749 aa25.16■■□□□ 1.62
PF4-201ENST00000296029 CDC42BPGQ6DT37 1551 aa25.15■■□□□ 1.62
PF4-201ENST00000296029 POTEAQ6S8J7 498 aa25.15■■□□□ 1.62
PF4-201ENST00000296029 TMEM132EQ6IEE7 984 aa25.14■■□□□ 1.62
PF4-201ENST00000296029 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
PF4-201ENST00000296029 YTHDC2Q9H6S0 1430 aaKnown RBP25.13■■□□□ 1.61
PF4-201ENST00000296029 STK26Q9P289 416 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms