RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 KCNA6P17658 529 aa26.47■■□□□ 1.83
TFF3-201ENST00000291525 NUP155O75694 1391 aa26.46■■□□□ 1.83
TFF3-201ENST00000291525 SLC26A8Q96RN1 970 aa26.46■■□□□ 1.83
TFF3-201ENST00000291525 ZFYVE9O95405 1425 aa26.46■■□□□ 1.83
TFF3-201ENST00000291525 PPP1R15AO75807 674 aaPredicted RBP26.45■■□□□ 1.82
TFF3-201ENST00000291525 RIMS2Q9UQ26 1411 aa26.45■■□□□ 1.82
TFF3-201ENST00000291525 PLEKHG1Q9ULL1 1385 aa26.44■■□□□ 1.82
TFF3-201ENST00000291525 NKTRP30414 1462 aaKnown RBP26.43■■□□□ 1.82
TFF3-201ENST00000291525 NWD1Q149M9 1564 aa26.43■■□□□ 1.82
TFF3-201ENST00000291525 MED1Q15648 1581 aaPredicted RBP26.43■■□□□ 1.82
TFF3-201ENST00000291525 CHGAP10645 457 aaKnown RBP26.42■■□□□ 1.82
TFF3-201ENST00000291525 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.42■■□□□ 1.82
TFF3-201ENST00000291525 SOCS7O14512 581 aa26.41■■□□□ 1.82
TFF3-201ENST00000291525 TMEM94Q12767 1356 aa26.41■■□□□ 1.82
TFF3-201ENST00000291525 PROSER2Q86WR7 435 aaPredicted RBP26.39■■□□□ 1.82
TFF3-201ENST00000291525 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.81
TFF3-201ENST00000291525 CHD2O14647 1828 aaKnown RBP26.35■■□□□ 1.81
TFF3-201ENST00000291525 SPHKAPQ2M3C7 1700 aa26.34■■□□□ 1.81
TFF3-201ENST00000291525 SENP3Q9H4L4 574 aaPredicted RBP26.34■■□□□ 1.81
TFF3-201ENST00000291525 DIP2AQ14689 1571 aa26.33■■□□□ 1.81
TFF3-201ENST00000291525 FAM135BQ49AJ0 1406 aa26.32■■□□□ 1.8
TFF3-201ENST00000291525 MSH6P52701 1360 aa26.32■■□□□ 1.8
TFF3-201ENST00000291525 TBX22Q9Y458 520 aa26.31■■□□□ 1.8
TFF3-201ENST00000291525 PHF23Q9BUL5 403 aaPredicted RBP26.29■■□□□ 1.8
TFF3-201ENST00000291525 PIK3R4Q99570 1358 aa26.27■■□□□ 1.8
TFF3-201ENST00000291525 ROBO1Q9Y6N7 1651 aa26.26■■□□□ 1.79
TFF3-201ENST00000291525 RBM33Q96EV2 1170 aaKnown RBP26.26■■□□□ 1.79
TFF3-201ENST00000291525 NAIPQ13075 1403 aa26.25■■□□□ 1.79
TFF3-201ENST00000291525 ADAMTS13Q76LX8 1427 aa26.25■■□□□ 1.79
TFF3-201ENST00000291525 NUTM2DQ5VT03 806 aaPredicted RBP26.25■■□□□ 1.79
TFF3-201ENST00000291525 TRPM2O94759 1503 aa26.24■■□□□ 1.79
TFF3-201ENST00000291525 NCOA3Q9Y6Q9 1424 aa26.24■■□□□ 1.79
TFF3-201ENST00000291525 ZNF326Q5BKZ1 582 aaKnown RBP26.2■■□□□ 1.78
TFF3-201ENST00000291525 HFM1A2PYH4 1435 aa26.19■■□□□ 1.78
TFF3-201ENST00000291525 C14orf37Q86TY3 774 aa26.18■■□□□ 1.78
TFF3-201ENST00000291525 KIF1BO60333 1816 aa26.17■■□□□ 1.78
TFF3-201ENST00000291525 SLAIN2Q9P270 581 aa26.17■■□□□ 1.78
TFF3-201ENST00000291525 CLTCL1P53675 1640 aa26.17■■□□□ 1.78
TFF3-201ENST00000291525 SETBP1Q9Y6X0 1596 aa26.16■■□□□ 1.78
TFF3-201ENST00000291525 TRIM52Q96A61 297 aa26.14■■□□□ 1.78
TFF3-201ENST00000291525 PHLPP1O60346 1717 aa26.13■■□□□ 1.77
TFF3-201ENST00000291525 NRXN3Q9Y4C0 1643 aa26.13■■□□□ 1.77
TFF3-201ENST00000291525 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
TFF3-201ENST00000291525 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.11■■□□□ 1.77
TFF3-201ENST00000291525 CADPS2Q86UW7 1296 aa26.11■■□□□ 1.77
TFF3-201ENST00000291525 ATF3P18847 181 aa26.1■■□□□ 1.77
TFF3-201ENST00000291525 C19orf44Q9H6X5 657 aa26.1■■□□□ 1.77
TFF3-201ENST00000291525 NEXMIFQ5QGS0 1516 aa26.09■■□□□ 1.77
TFF3-201ENST00000291525 XRN1Q8IZH2 1706 aaKnown RBP26.08■■□□□ 1.77
TFF3-201ENST00000291525 PTPRUQ92729 1446 aa26.08■■□□□ 1.77
TFF3-201ENST00000291525 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
TFF3-201ENST00000291525 DCCP43146 1447 aa26.05■■□□□ 1.76
TFF3-201ENST00000291525 JCADQ9P266 1359 aa26.03■■□□□ 1.76
TFF3-201ENST00000291525 COL16A1Q07092 1604 aaPredicted RBP26.01■■□□□ 1.75
TFF3-201ENST00000291525 METP08581 1390 aa26■■□□□ 1.75
TFF3-201ENST00000291525 VGFO15240 615 aaPredicted RBP26■■□□□ 1.75
TFF3-201ENST00000291525 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
TFF3-201ENST00000291525 RPGRIP1LQ68CZ1 1315 aa25.98■■□□□ 1.75
TFF3-201ENST00000291525 RGS17Q9UGC6 210 aaPredicted RBP25.96■■□□□ 1.75
TFF3-201ENST00000291525 PPLO60437 1756 aa25.95■■□□□ 1.74
TFF3-201ENST00000291525 ADGRL3Q9HAR2 1447 aa25.93■■□□□ 1.74
TFF3-201ENST00000291525 SETD1AO15047 1707 aaKnown RBP25.91■■□□□ 1.74
TFF3-201ENST00000291525 SPATA31A6Q5VVP1 1343 aa25.91■■□□□ 1.74
TFF3-201ENST00000291525 ACIN1Q9UKV3 1341 aaKnown RBP25.91■■□□□ 1.74
TFF3-201ENST00000291525 SHPRHQ149N8 1683 aa25.91■■□□□ 1.74
TFF3-201ENST00000291525 BRINP3Q76B58 766 aa25.91■■□□□ 1.74
TFF3-201ENST00000291525 CCDC144AA2RUR9 1427 aa25.9■■□□□ 1.74
TFF3-201ENST00000291525 MST1RQ04912 1400 aa25.9■■□□□ 1.74
TFF3-201ENST00000291525 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
TFF3-201ENST00000291525 NALCNQ8IZF0 1738 aa25.9■■□□□ 1.74
TFF3-201ENST00000291525 ASXL1Q8IXJ9 1541 aa25.89■■□□□ 1.74
TFF3-201ENST00000291525 NHSL1Q5SYE7 1610 aa25.85■■□□□ 1.73
TFF3-201ENST00000291525 FOXD1Q16676 465 aa25.85■■□□□ 1.73
TFF3-201ENST00000291525 MPHOSPH9Q99550 1183 aa25.85■■□□□ 1.73
TFF3-201ENST00000291525 PRAG1Q86YV5 1406 aa25.85■■□□□ 1.73
TFF3-201ENST00000291525 MEX3CQ5U5Q3 659 aaKnown RBP25.84■■□□□ 1.73
TFF3-201ENST00000291525 POTEAQ6S8J7 498 aa25.84■■□□□ 1.73
TFF3-201ENST00000291525 LRP6O75581 1613 aa25.81■■□□□ 1.72
TFF3-201ENST00000291525 SETD5Q9C0A6 1442 aa25.8■■□□□ 1.72
TFF3-201ENST00000291525 ANKRD30BQ9BXX2 1392 aa25.8■■□□□ 1.72
TFF3-201ENST00000291525 ROBO2Q9HCK4 1378 aa25.8■■□□□ 1.72
TFF3-201ENST00000291525 IFT172Q9UG01 1749 aa25.79■■□□□ 1.72
TFF3-201ENST00000291525 SPATA31E1Q6ZUB1 1445 aa25.78■■□□□ 1.72
TFF3-201ENST00000291525 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
TFF3-201ENST00000291525 LRRC59Q96AG4 307 aaKnown RBP25.77■■□□□ 1.72
TFF3-201ENST00000291525 C1orf167Q5SNV9 1468 aa25.77■■□□□ 1.72
TFF3-201ENST00000291525 ZNF772Q68DY9 489 aaPredicted RBP25.76■■□□□ 1.71
TFF3-201ENST00000291525 ADGRF5Q8IZF2 1346 aa25.73■■□□□ 1.71
TFF3-201ENST00000291525 NUTM2BA6NNL0 878 aaPredicted RBP25.72■■□□□ 1.71
TFF3-201ENST00000291525 NUTM2EB1AL46 878 aaPredicted RBP25.72■■□□□ 1.71
TFF3-201ENST00000291525 NUTM2AQ8IVF1 878 aaPredicted RBP25.72■■□□□ 1.71
TFF3-201ENST00000291525 LAMC1P11047 1609 aa25.71■■□□□ 1.71
TFF3-201ENST00000291525 CDC42BPGQ6DT37 1551 aa25.69■■□□□ 1.7
TFF3-201ENST00000291525 KNDC1Q76NI1 1749 aa25.68■■□□□ 1.7
TFF3-201ENST00000291525 TECPR2O15040 1411 aa25.68■■□□□ 1.7
TFF3-201ENST00000291525 PIK3C2GO75747 1445 aa25.68■■□□□ 1.7
TFF3-201ENST00000291525 LRPPRCP42704 1394 aaKnown RBP25.68■■□□□ 1.7
TFF3-201ENST00000291525 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
TFF3-201ENST00000291525 DDX17Q92841 729 aaKnown RBP25.67■■□□□ 1.7
TFF3-201ENST00000291525 RAB3GAP2Q9H2M9 1393 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms