RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
SEC16A-202ENST00000290037 CCP110O43303 1012 aa18.11■□□□□ 0.49
SEC16A-202ENST00000290037 COG3Q96JB2 828 aa18.11■□□□□ 0.49
SEC16A-202ENST00000290037 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
SEC16A-202ENST00000290037 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
SEC16A-202ENST00000290037 KIF3BO15066 747 aa18.1■□□□□ 0.49
SEC16A-202ENST00000290037 CCDC47Q96A33 483 aaKnown RBP18.1■□□□□ 0.49
SEC16A-202ENST00000290037 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
SEC16A-202ENST00000290037 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
SEC16A-202ENST00000290037 AMOTL1Q8IY63 956 aa18.09■□□□□ 0.49
SEC16A-202ENST00000290037 ABCA10Q8WWZ4 1543 aa18.09■□□□□ 0.49
SEC16A-202ENST00000290037 GNAI1P63096 354 aa18.09■□□□□ 0.49
SEC16A-202ENST00000290037 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
SEC16A-202ENST00000290037 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
SEC16A-202ENST00000290037 RUNDC1Q96C34 613 aa18.08■□□□□ 0.49
SEC16A-202ENST00000290037 ERC2O15083 957 aa18.08■□□□□ 0.49
SEC16A-202ENST00000290037 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.08■□□□□ 0.49
SEC16A-202ENST00000290037 PLCB2Q00722 1185 aa18.08■□□□□ 0.48
SEC16A-202ENST00000290037 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
SEC16A-202ENST00000290037 ACBD3Q9H3P7 528 aa18.07■□□□□ 0.48
SEC16A-202ENST00000290037 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
SEC16A-202ENST00000290037 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
SEC16A-202ENST00000290037 GOLGA6L19H0YKK7 550 aa18.06■□□□□ 0.48
SEC16A-202ENST00000290037 PDCP20941 246 aa18.06■□□□□ 0.48
SEC16A-202ENST00000290037 NAT10Q9H0A0 1025 aaKnown RBP18.06■□□□□ 0.48
SEC16A-202ENST00000290037 CAVIN1Q6NZI2 390 aaKnown RBP18.06■□□□□ 0.48
SEC16A-202ENST00000290037 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
SEC16A-202ENST00000290037 NOC3LQ8WTT2 800 aaKnown RBP18.06■□□□□ 0.48
SEC16A-202ENST00000290037 PTPN23Q9H3S7 1636 aa18.06■□□□□ 0.48
SEC16A-202ENST00000290037 INTS3Q68E01 1043 aaKnown RBP18.05■□□□□ 0.48
SEC16A-202ENST00000290037 MAGI1Q96QZ7 1491 aaPredicted RBP18.05■□□□□ 0.48
SEC16A-202ENST00000290037 NAP1L2Q9ULW6 460 aaPredicted RBP18.05■□□□□ 0.48
SEC16A-202ENST00000290037 CHMP5Q9NZZ3 219 aa18.04■□□□□ 0.48
SEC16A-202ENST00000290037 IPO7O95373 1038 aaKnown RBP18.04■□□□□ 0.48
SEC16A-202ENST00000290037 CDR1P51861 262 aa18.04■□□□□ 0.48
SEC16A-202ENST00000290037 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
SEC16A-202ENST00000290037 MBD3O95983 291 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 GSE1Q14687 1217 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 GGT6Q6P531 493 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 DHX29Q7Z478 1369 aaKnown RBP18.03■□□□□ 0.48
SEC16A-202ENST00000290037 PDE3AQ14432 1141 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 SMG6Q86US8 1419 aaKnown RBP18.03■□□□□ 0.48
SEC16A-202ENST00000290037 TAF7LQ5H9L4 462 aa18.03■□□□□ 0.48
SEC16A-202ENST00000290037 AMPHP49418 695 aa18.02■□□□□ 0.48
SEC16A-202ENST00000290037 TEX35Q5T0J7 233 aa18.02■□□□□ 0.48
SEC16A-202ENST00000290037 CEP89Q96ST8 783 aa18.02■□□□□ 0.48
SEC16A-202ENST00000290037 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.47
SEC16A-202ENST00000290037 C1orf141Q5JVX7 400 aa18.01■□□□□ 0.47
SEC16A-202ENST00000290037 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
SEC16A-202ENST00000290037 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
SEC16A-202ENST00000290037 NESP48681 1621 aa18■□□□□ 0.47
SEC16A-202ENST00000290037 PSMA5P28066 241 aa18■□□□□ 0.47
SEC16A-202ENST00000290037 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
SEC16A-202ENST00000290037 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
SEC16A-202ENST00000290037 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
SEC16A-202ENST00000290037 A0A0G2JS52 829 aa17.98■□□□□ 0.47
SEC16A-202ENST00000290037 H3BQV1 296 aa17.98■□□□□ 0.47
SEC16A-202ENST00000290037 IFFO2Q5TF58 517 aa17.98■□□□□ 0.47
SEC16A-202ENST00000290037 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
SEC16A-202ENST00000290037 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
SEC16A-202ENST00000290037 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
SEC16A-202ENST00000290037 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
SEC16A-202ENST00000290037 ERC1Q8IUD2 1116 aa17.98■□□□□ 0.47
SEC16A-202ENST00000290037 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
SEC16A-202ENST00000290037 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.98■□□□□ 0.47
SEC16A-202ENST00000290037 PDE4AP27815 886 aa17.97■□□□□ 0.47
SEC16A-202ENST00000290037 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
SEC16A-202ENST00000290037 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
SEC16A-202ENST00000290037 LMOD2Q6P5Q4 547 aa17.97■□□□□ 0.47
SEC16A-202ENST00000290037 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
SEC16A-202ENST00000290037 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
SEC16A-202ENST00000290037 DIAPH1O60610 1272 aaKnown RBP17.97■□□□□ 0.47
SEC16A-202ENST00000290037 MYO6Q9UM54 1294 aa17.97■□□□□ 0.47
SEC16A-202ENST00000290037 RDXP35241 583 aaKnown RBP17.96■□□□□ 0.47
SEC16A-202ENST00000290037 TRIM29Q14134 588 aa17.96■□□□□ 0.47
SEC16A-202ENST00000290037 PANK3Q9H999 370 aa17.96■□□□□ 0.47
SEC16A-202ENST00000290037 NOL10Q9BSC4 688 aaKnown RBP17.95■□□□□ 0.46
SEC16A-202ENST00000290037 NSD2O96028 1365 aa17.95■□□□□ 0.46
SEC16A-202ENST00000290037 FAM184AQ8NB25 1140 aa17.95■□□□□ 0.46
SEC16A-202ENST00000290037 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
SEC16A-202ENST00000290037 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
SEC16A-202ENST00000290037 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
SEC16A-202ENST00000290037 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
SEC16A-202ENST00000290037 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
SEC16A-202ENST00000290037 BECN2A8MW95 431 aa17.94■□□□□ 0.46
SEC16A-202ENST00000290037 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
SEC16A-202ENST00000290037 GCC1Q96CN9 775 aa17.94■□□□□ 0.46
SEC16A-202ENST00000290037 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
SEC16A-202ENST00000290037 TSHZ2Q9NRE2 1034 aa17.93■□□□□ 0.46
SEC16A-202ENST00000290037 POGZQ7Z3K3 1410 aa17.93■□□□□ 0.46
SEC16A-202ENST00000290037 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
SEC16A-202ENST00000290037 PNISRQ8TF01 805 aaKnown RBP17.93■□□□□ 0.46
SEC16A-202ENST00000290037 XBP1P17861 261 aa17.93■□□□□ 0.46
SEC16A-202ENST00000290037 GNAI3P08754 354 aa17.93■□□□□ 0.46
SEC16A-202ENST00000290037 CSB-PGBD3P0DP91 1061 aa17.93■□□□□ 0.46
SEC16A-202ENST00000290037 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
SEC16A-202ENST00000290037 ABCC11Q96J66 1382 aa17.92■□□□□ 0.46
SEC16A-202ENST00000290037 ERCC4Q92889 916 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms