RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 NESP48681 1621 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 TEX35Q5T0J7 233 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 ZNF771Q7L3S4 317 aaPredicted RBP21.55■■□□□ 1.04
PCDHA13-201ENST00000289272 ZKSCAN2Q63HK3 967 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 DIAPH3Q9NSV4 1193 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 APBB1O00213 710 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 APAF1O14727 1248 aa21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
PCDHA13-201ENST00000289272 SLC4A3P48751 1232 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 ARID3AQ99856 593 aa21.53■■□□□ 1.04
PCDHA13-201ENST00000289272 CCDC173Q0VFZ6 552 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 GPATCH3Q96I76 525 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 SYNJ2O15056 1496 aa21.52■■□□□ 1.04
PCDHA13-201ENST00000289272 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 BICRAQ9NZM4 1560 aa21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 HMGN5P82970 282 aaKnown RBP21.51■■□□□ 1.03
PCDHA13-201ENST00000289272 DDX19BQ9UMR2 479 aa21.5■■□□□ 1.03
PCDHA13-201ENST00000289272 NINLQ9Y2I6 1382 aa21.5■■□□□ 1.03
PCDHA13-201ENST00000289272 AMPHP49418 695 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 KIAA1107Q9UPP5 1409 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 REC8O95072 547 aa21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
PCDHA13-201ENST00000289272 MAP3K1Q13233 1512 aa21.48■■□□□ 1.03
PCDHA13-201ENST00000289272 CCDC66A2RUB6 948 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 CC2D2AQ9P2K1 1620 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
PCDHA13-201ENST00000289272 TROQ12816 1431 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 BCL2L13Q9BXK5 485 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 COG6Q9Y2V7 657 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 NAIPQ13075 1403 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 AMER1Q5JTC6 1135 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 NASPP49321 788 aaPredicted RBP21.45■■□□□ 1.02
PCDHA13-201ENST00000289272 GNL2Q13823 731 aaKnown RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 PCF11O94913 1555 aaKnown RBP21.44■■□□□ 1.02
PCDHA13-201ENST00000289272 LETM1O95202 739 aaPredicted RBP21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 GOLGA6L19H0YKK7 550 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 NOM1Q5C9Z4 860 aaKnown RBP21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 DAPK1P53355 1430 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 COG3Q96JB2 828 aa21.43■■□□□ 1.02
PCDHA13-201ENST00000289272 C22orf23Q9BZE7 217 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 TRAK2O60296 914 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 C9orf84Q5VXU9 1444 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 FAM69CQ0P6D2 419 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 BRPF3Q9ULD4 1205 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 ROCK1Q13464 1354 aa21.42■■□□□ 1.02
PCDHA13-201ENST00000289272 IL27Q8NEV9 243 aa21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 ARGLU1Q9NWB6 273 aaPredicted RBP21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 ARHGAP5Q13017 1502 aa21.41■■□□□ 1.02
PCDHA13-201ENST00000289272 MBD3O95983 291 aa21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 A0A0U1RQG5 324 aaPredicted RBP21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 TAF3Q5VWG9 929 aa21.4■■□□□ 1.02
PCDHA13-201ENST00000289272 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
PCDHA13-201ENST00000289272 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 TMX4Q9H1E5 349 aaPredicted RBP21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
PCDHA13-201ENST00000289272 MINK1Q8N4C8 1332 aaPredicted RBP21.36■■□□□ 1.01
PCDHA13-201ENST00000289272 ADAMTS8Q9UP79 889 aa21.36■■□□□ 1.01
PCDHA13-201ENST00000289272 TRIM6-TRIM34B2RNG4 842 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 SLC4A10Q6U841 1118 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CIZ1Q9ULV3 898 aaPredicted RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CWC15Q9P013 229 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 CUL7Q14999 1698 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 DZIP1LQ8IYY4 767 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 UBE2Q2Q8WVN8 375 aa21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 R3HCC1Q9Y3T6 440 aaKnown RBP21.35■■□□□ 1.01
PCDHA13-201ENST00000289272 DHX8Q14562 1220 aaKnown RBP21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 BECN2A8MW95 431 aa21.34■■□□□ 1.01
PCDHA13-201ENST00000289272 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 INTS3Q68E01 1043 aaKnown RBP21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 ACBD3Q9H3P7 528 aa21.33■■□□□ 1.01
PCDHA13-201ENST00000289272 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1
PCDHA13-201ENST00000289272 CCDC70Q6NSX1 233 aa21.33■■□□□ 1
PCDHA13-201ENST00000289272 PDE3AQ14432 1141 aa21.32■■□□□ 1
PCDHA13-201ENST00000289272 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
PCDHA13-201ENST00000289272 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
PCDHA13-201ENST00000289272 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
PCDHA13-201ENST00000289272 CCDC9Q9Y3X0 531 aaKnown RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 CDK13Q14004 1512 aaKnown RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 ELL2O00472 640 aaPredicted RBP21.31■■□□□ 1
PCDHA13-201ENST00000289272 PPP2R1AP30153 589 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 MCM2P49736 904 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
PCDHA13-201ENST00000289272 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
PCDHA13-201ENST00000289272 KIAA0586Q9BVV6 1533 aa21.29■■□□□ 1
PCDHA13-201ENST00000289272 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms