RNA–Protein interactions for RNA: ENST00000280704.8

LDHC-201, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 1,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-201ENST00000280704 DPYSL4O14531 572 aa10.66□□□□□ -0.7
LDHC-201ENST00000280704 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
LDHC-201ENST00000280704 CHMP7Q8WUX9 453 aaPredicted RBP10.66□□□□□ -0.7
LDHC-201ENST00000280704 PRKD2Q9BZL6 878 aa10.64□□□□□ -0.71
LDHC-201ENST00000280704 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
LDHC-201ENST00000280704 DDX12PQ92771 950 aa10.63□□□□□ -0.71
LDHC-201ENST00000280704 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
LDHC-201ENST00000280704 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
LDHC-201ENST00000280704 SPATA31D1Q6ZQQ2 1576 aa10.61□□□□□ -0.71
LDHC-201ENST00000280704 NRG2O14511 850 aaPredicted RBP10.61□□□□□ -0.71
LDHC-201ENST00000280704 TSR1Q2NL82 804 aaKnown RBP10.61□□□□□ -0.71
LDHC-201ENST00000280704 PPP4CP60510 307 aa10.6□□□□□ -0.71
LDHC-201ENST00000280704 SNAPC4Q5SXM2 1469 aa10.6□□□□□ -0.71
LDHC-201ENST00000280704 C3orf80F5H4A9 247 aa10.59□□□□□ -0.71
LDHC-201ENST00000280704 PPP1R18Q6NYC8 613 aa10.59□□□□□ -0.71
LDHC-201ENST00000280704 TSPOAP1O95153 1857 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 SMAPO00193 183 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
LDHC-201ENST00000280704 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 MTRQ99707 1265 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
LDHC-201ENST00000280704 ZNF516Q92618 1163 aa10.56□□□□□ -0.72
LDHC-201ENST00000280704 V9GY48 417 aaPredicted RBP10.56□□□□□ -0.72
LDHC-201ENST00000280704 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
LDHC-201ENST00000280704 DIP2BQ9P265 1576 aa10.55□□□□□ -0.72
LDHC-201ENST00000280704 ABCC8Q09428 1581 aa10.54□□□□□ -0.72
LDHC-201ENST00000280704 NBR1Q14596 966 aa10.54□□□□□ -0.72
LDHC-201ENST00000280704 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
LDHC-201ENST00000280704 MAP3K7O43318 606 aa10.53□□□□□ -0.72
LDHC-201ENST00000280704 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
LDHC-201ENST00000280704 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.72
LDHC-201ENST00000280704 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
LDHC-201ENST00000280704 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
LDHC-201ENST00000280704 MAGI1Q96QZ7 1491 aaPredicted RBP10.52□□□□□ -0.73
LDHC-201ENST00000280704 WIZO95785 1651 aa10.5□□□□□ -0.73
LDHC-201ENST00000280704 NKX2-3Q8TAU0 364 aa10.5□□□□□ -0.73
LDHC-201ENST00000280704 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
LDHC-201ENST00000280704 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.5□□□□□ -0.73
LDHC-201ENST00000280704 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
LDHC-201ENST00000280704 APLP1P51693 650 aa10.49□□□□□ -0.73
LDHC-201ENST00000280704 PRSS12P56730 875 aa10.49□□□□□ -0.73
LDHC-201ENST00000280704 PDIA6Q15084 440 aa10.49□□□□□ -0.73
LDHC-201ENST00000280704 ZNF787Q6DD87 383 aa10.49□□□□□ -0.73
LDHC-201ENST00000280704 TATDN2Q93075 761 aa10.48□□□□□ -0.73
LDHC-201ENST00000280704 PDZRN3Q9UPQ7 1066 aa10.48□□□□□ -0.73
LDHC-201ENST00000280704 ZNF775Q96BV0 537 aaPredicted RBP10.47□□□□□ -0.73
LDHC-201ENST00000280704 MAPKBP1O60336 1514 aa10.47□□□□□ -0.73
LDHC-201ENST00000280704 POLA1P09884 1462 aaPredicted RBP10.46□□□□□ -0.74
LDHC-201ENST00000280704 TOP2BQ02880 1626 aa10.45□□□□□ -0.74
LDHC-201ENST00000280704 CEP170Q5SW79 1584 aa10.45□□□□□ -0.74
LDHC-201ENST00000280704 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
LDHC-201ENST00000280704 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
LDHC-201ENST00000280704 GRIN2BQ13224 1484 aa10.42□□□□□ -0.74
LDHC-201ENST00000280704 NBPF26B4DH59 902 aa10.42□□□□□ -0.74
LDHC-201ENST00000280704 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
LDHC-201ENST00000280704 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
LDHC-201ENST00000280704 SOGA1O94964 1423 aa10.41□□□□□ -0.74
LDHC-201ENST00000280704 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
LDHC-201ENST00000280704 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
LDHC-201ENST00000280704 CDHR5Q9HBB8 845 aa10.41□□□□□ -0.74
LDHC-201ENST00000280704 RNF40O75150 1001 aa10.4□□□□□ -0.74
LDHC-201ENST00000280704 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
LDHC-201ENST00000280704 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
LDHC-201ENST00000280704 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
LDHC-201ENST00000280704 COPS2P61201 443 aa10.39□□□□□ -0.75
LDHC-201ENST00000280704 EMID1Q96A84 441 aaPredicted RBP10.39□□□□□ -0.75
LDHC-201ENST00000280704 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
LDHC-201ENST00000280704 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
LDHC-201ENST00000280704 GRXCR2A6NFK2 248 aa10.35□□□□□ -0.75
LDHC-201ENST00000280704 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
LDHC-201ENST00000280704 OSBPP22059 807 aa10.34□□□□□ -0.75
LDHC-201ENST00000280704 SWT1Q5T5J6 900 aaKnown RBP10.34□□□□□ -0.75
LDHC-201ENST00000280704 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
LDHC-201ENST00000280704 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
LDHC-201ENST00000280704 POTECB2RU33 542 aa10.33□□□□□ -0.76
LDHC-201ENST00000280704 ZPR1O75312 459 aa10.33□□□□□ -0.76
LDHC-201ENST00000280704 GGCXP38435 758 aa10.33□□□□□ -0.76
LDHC-201ENST00000280704 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
LDHC-201ENST00000280704 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
LDHC-201ENST00000280704 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
LDHC-201ENST00000280704 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
LDHC-201ENST00000280704 MYT1Q01538 1121 aa10.32□□□□□ -0.76
LDHC-201ENST00000280704 PCF11O94913 1555 aaKnown RBP10.31□□□□□ -0.76
LDHC-201ENST00000280704 HDGFP51858 240 aaKnown RBP10.31□□□□□ -0.76
LDHC-201ENST00000280704 ADCY10Q96PN6 1610 aa10.3□□□□□ -0.76
LDHC-201ENST00000280704 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
LDHC-201ENST00000280704 NPDC1Q9NQX5 325 aaPredicted RBP10.3□□□□□ -0.76
LDHC-201ENST00000280704 SLC19A1P41440 591 aa10.29□□□□□ -0.76
LDHC-201ENST00000280704 ARIH1Q9Y4X5 557 aaPredicted RBP10.29□□□□□ -0.76
LDHC-201ENST00000280704 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
LDHC-201ENST00000280704 GRIN2AQ12879 1464 aa10.29□□□□□ -0.76
LDHC-201ENST00000280704 NUP160Q12769 1436 aa10.28□□□□□ -0.76
LDHC-201ENST00000280704 PADI6Q6TGC4 694 aa10.28□□□□□ -0.76
LDHC-201ENST00000280704 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
LDHC-201ENST00000280704 PTPRMP28827 1452 aa10.27□□□□□ -0.77
LDHC-201ENST00000280704 TOP2AP11388 1531 aaKnown RBP10.27□□□□□ -0.77
LDHC-201ENST00000280704 E2F4Q16254 413 aa10.26□□□□□ -0.77
LDHC-201ENST00000280704 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
LDHC-201ENST00000280704 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms