RNA–Protein interactions for RNA: ENST00000264867.6

PPARGC1A-201, Transcript of PPARG coactivator 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPARGC1A, Length 6,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-201ENST00000264867 TRIM29Q14134 588 aa6.75□□□□□ -1.33
PPARGC1A-201ENST00000264867 RRP12Q5JTH9 1297 aaKnown RBP6.75□□□□□ -1.33
PPARGC1A-201ENST00000264867 REC8O95072 547 aa6.75□□□□□ -1.33
PPARGC1A-201ENST00000264867 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
PPARGC1A-201ENST00000264867 SYNE3Q6ZMZ3 975 aa6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 CGNL1Q0VF96 1302 aa6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 NASPP49321 788 aaPredicted RBP6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 PRKRIP1Q9H875 184 aaPredicted RBP6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 NAP1L1P55209 391 aaKnown RBP6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 ST20-MTHFSA0A0A6YYL1 179 aa6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 IL27Q8NEV9 243 aa6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 ANKRD20A12PQ8NF67 263 aa6.74□□□□□ -1.33
PPARGC1A-201ENST00000264867 NUTM2FA1L443 756 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 SMC3Q9UQE7 1217 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 MRE11P49959 708 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 RUFY2Q8WXA3 655 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 CHMP4CQ96CF2 233 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 C22orf23Q9BZE7 217 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 ACBD3Q9H3P7 528 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 DDX19BQ9UMR2 479 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 RAD21O60216 631 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 NECTIN2Q92692 538 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 TRAK1Q9UPV9 953 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 NUCB2P80303 420 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 HSP90B2PQ58FF3 399 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 MAP7D2Q96T17 732 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 ERCC6Q03468 1493 aa6.73□□□□□ -1.33
PPARGC1A-201ENST00000264867 APAF1O14727 1248 aa6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 PDILTQ8N807 584 aa6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 NGDNQ8NEJ9 315 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 CPLX1O14810 134 aa6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 HOOK1Q9UJC3 728 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 DHX57Q6P158 1386 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 NGEFQ8N5V2 710 aa6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 IFIT2P09913 472 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 HNRNPMP52272 730 aaKnown RBP eCLIP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 INTS3Q68E01 1043 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 CCDC47Q96A33 483 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 EIF2S2P20042 333 aaKnown RBP6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 TTLL5Q6EMB2 1281 aa6.72□□□□□ -1.33
PPARGC1A-201ENST00000264867 APPP05067 770 aa6.71□□□□□ -1.33
PPARGC1A-201ENST00000264867 SKIDA1Q1XH10 827 aa6.71□□□□□ -1.33
PPARGC1A-201ENST00000264867 CWC15Q9P013 229 aaKnown RBP6.71□□□□□ -1.33
PPARGC1A-201ENST00000264867 H0YHG0 523 aa6.71□□□□□ -1.33
PPARGC1A-201ENST00000264867 CDR1P51861 262 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 NFXL1Q6ZNB6 911 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 TRAK2O60296 914 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 CAVIN1Q6NZI2 390 aaKnown RBP6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC73Q6ZRK6 1079 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 CAGE1Q8TC20 777 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 LNPKQ9C0E8 428 aa6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 CPLX2Q6PUV4 134 aaKnown RBP6.71□□□□□ -1.34
PPARGC1A-201ENST00000264867 KIF3BO15066 747 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 KDM4AO75164 1064 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC27Q2M243 656 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 MTERF4Q7Z6M4 381 aaKnown RBP6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 C9orf78Q9NZ63 289 aaPredicted RBP6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC66A2RUB6 948 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 RDXP35241 583 aaKnown RBP6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 USP47Q96K76 1375 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 RNF20Q5VTR2 975 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 TSPY26PQ9H489 355 aa6.7□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC88BA6NC98 1476 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 DHX16O60231 1041 aaKnown RBP6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 PANK1Q8TE04 598 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 C1orf141Q5JVX7 400 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 OLFM4Q6UX06 510 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 PLCD4Q9BRC7 762 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 SMC2O95347 1197 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 RIPK4P57078 832 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 SPC24Q8NBT2 197 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 TRIM5Q9C035 493 aa6.69□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC173Q0VFZ6 552 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 COG3Q96JB2 828 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 NAT10Q9H0A0 1025 aaKnown RBP6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 CDC45O75419 566 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 LRRFIP1Q32MZ4 808 aaKnown RBP6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC191Q8NCU4 936 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 TRDNQ13061 729 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 AMOTL1Q8IY63 956 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 ROCK1Q13464 1354 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 NEXNQ0ZGT2 675 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 LEKR1Q6ZMV7 388 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 ERCC4Q92889 916 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
PPARGC1A-201ENST00000264867 ERICH2A1L162 156 aa6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 HSP90AB2PQ58FF8 381 aa6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 CT47A1Q5JQC4 288 aaPredicted RBP6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 API5Q9BZZ5 524 aaKnown RBP6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 DCTN1Q14203 1278 aa6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 NOL10Q9BSC4 688 aaKnown RBP6.67□□□□□ -1.34
PPARGC1A-201ENST00000264867 FHOD3Q2V2M9 1422 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms