RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
NID1-201ENST00000264187 C1orf141Q5JVX7 400 aa18.41■□□□□ 0.54
NID1-201ENST00000264187 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
NID1-201ENST00000264187 TTLL5Q6EMB2 1281 aa18.39■□□□□ 0.54
NID1-201ENST00000264187 MNS1Q8NEH6 495 aa18.39■□□□□ 0.54
NID1-201ENST00000264187 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
NID1-201ENST00000264187 L3MBTL2Q969R5 705 aa18.39■□□□□ 0.53
NID1-201ENST00000264187 CCDC43Q96MW1 224 aaKnown RBP18.39■□□□□ 0.53
NID1-201ENST00000264187 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
NID1-201ENST00000264187 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
NID1-201ENST00000264187 ZFYVE27Q5T4F4 411 aa18.39■□□□□ 0.53
NID1-201ENST00000264187 VPS37DQ86XT2 251 aa18.38■□□□□ 0.53
NID1-201ENST00000264187 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
NID1-201ENST00000264187 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
NID1-201ENST00000264187 TEFQ10587 303 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 CHMP4CQ96CF2 233 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 RUFY2Q8WXA3 655 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 SYTL4Q96C24 671 aaPredicted RBP18.37■□□□□ 0.53
NID1-201ENST00000264187 AK7Q96M32 723 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 MTMR7Q9Y216 660 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 EVA1CP58658 441 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 ODF2Q5BJF6 829 aa18.37■□□□□ 0.53
NID1-201ENST00000264187 PANK3Q9H999 370 aa18.36■□□□□ 0.53
NID1-201ENST00000264187 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
NID1-201ENST00000264187 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
NID1-201ENST00000264187 TRDNQ13061 729 aa18.36■□□□□ 0.53
NID1-201ENST00000264187 PDILTQ8N807 584 aa18.36■□□□□ 0.53
NID1-201ENST00000264187 MAP7D2Q96T17 732 aa18.35■□□□□ 0.53
NID1-201ENST00000264187 REC8O95072 547 aa18.35■□□□□ 0.53
NID1-201ENST00000264187 FYB1O15117 783 aa18.35■□□□□ 0.53
NID1-201ENST00000264187 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
NID1-201ENST00000264187 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
NID1-201ENST00000264187 HOOK1Q9UJC3 728 aaKnown RBP18.34■□□□□ 0.53
NID1-201ENST00000264187 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
NID1-201ENST00000264187 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.532e-7■■■■□ 25.4
NID1-201ENST00000264187 RRP1P56182 461 aaKnown RBP18.33■□□□□ 0.53
NID1-201ENST00000264187 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.52
NID1-201ENST00000264187 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.52
NID1-201ENST00000264187 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
NID1-201ENST00000264187 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
NID1-201ENST00000264187 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
NID1-201ENST00000264187 CDR1P51861 262 aa18.32■□□□□ 0.52
NID1-201ENST00000264187 RNF214Q8ND24 703 aa18.32■□□□□ 0.52
NID1-201ENST00000264187 PLCD4Q9BRC7 762 aa18.32■□□□□ 0.52
NID1-201ENST00000264187 ARGLU1Q9NWB6 273 aaPredicted RBP18.32■□□□□ 0.52
NID1-201ENST00000264187 ERICH2A1L162 156 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 CARMIL1Q5VZK9 1371 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.31■□□□□ 0.52
NID1-201ENST00000264187 WASHC2CQ9Y4E1 1318 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 COG3Q96JB2 828 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 H0YHG0 523 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 CAGE1Q8TC20 777 aa18.31■□□□□ 0.52
NID1-201ENST00000264187 OFD1O75665 1012 aa18.3■□□□□ 0.52
NID1-201ENST00000264187 CCDC73Q6ZRK6 1079 aa18.3■□□□□ 0.52
NID1-201ENST00000264187 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
NID1-201ENST00000264187 MYBBP1AQ9BQG0 1328 aaKnown RBP18.3■□□□□ 0.52
NID1-201ENST00000264187 APAF1O14727 1248 aa18.3■□□□□ 0.52
NID1-201ENST00000264187 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
NID1-201ENST00000264187 E9PSI1 815 aa18.29■□□□□ 0.52
NID1-201ENST00000264187 NOM1Q5C9Z4 860 aaKnown RBP18.29■□□□□ 0.52
NID1-201ENST00000264187 RNF20Q5VTR2 975 aa18.29■□□□□ 0.52
NID1-201ENST00000264187 EPS15P42566 896 aa18.28■□□□□ 0.52
NID1-201ENST00000264187 G3BP1Q13283 466 aaKnown RBP eCLIP18.28■□□□□ 0.52
NID1-201ENST00000264187 DHX37Q8IY37 1157 aaKnown RBP18.28■□□□□ 0.52
NID1-201ENST00000264187 FKBP5Q13451 457 aaPredicted RBP18.28■□□□□ 0.52
NID1-201ENST00000264187 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
NID1-201ENST00000264187 EFCAB2Q5VUJ9 269 aa18.28■□□□□ 0.52
NID1-201ENST00000264187 ACBD3Q9H3P7 528 aa18.28■□□□□ 0.52
NID1-201ENST00000264187 NEUROD6Q96NK8 337 aa18.27■□□□□ 0.51
NID1-201ENST00000264187 LNPKQ9C0E8 428 aa18.27■□□□□ 0.51
NID1-201ENST00000264187 KIF15Q9NS87 1388 aa18.27■□□□□ 0.51
NID1-201ENST00000264187 SAFBQ15424 915 aaKnown RBP eCLIP18.26■□□□□ 0.51
NID1-201ENST00000264187 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
NID1-201ENST00000264187 WASHC4Q2M389 1173 aa18.26■□□□□ 0.51
NID1-201ENST00000264187 CCDC27Q2M243 656 aa18.25■□□□□ 0.51
NID1-201ENST00000264187 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
NID1-201ENST00000264187 ATP2B1P20020 1258 aa18.25■□□□□ 0.51
NID1-201ENST00000264187 CUX2O14529 1486 aa18.24■□□□□ 0.51
NID1-201ENST00000264187 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
NID1-201ENST00000264187 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
NID1-201ENST00000264187 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 SDF4Q9BRK5 362 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 DZIP1LQ8IYY4 767 aaKnown RBP18.23■□□□□ 0.51
NID1-201ENST00000264187 FMNL2Q96PY5 1086 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 PAF1Q8N7H5 531 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 RIPK4P57078 832 aa18.23■□□□□ 0.51
NID1-201ENST00000264187 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
NID1-201ENST00000264187 RALYLQ86SE5 291 aaKnown RBP18.22■□□□□ 0.51
NID1-201ENST00000264187 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
NID1-201ENST00000264187 BRPF1P55201 1214 aaPredicted RBP18.22■□□□□ 0.51
NID1-201ENST00000264187 CCDC173Q0VFZ6 552 aa18.22■□□□□ 0.51
NID1-201ENST00000264187 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
NID1-201ENST00000264187 SOGA1O94964 1423 aa18.21■□□□□ 0.51
NID1-201ENST00000264187 TSPYL1Q9H0U9 437 aa18.21■□□□□ 0.51
NID1-201ENST00000264187 IKQ13123 557 aaPredicted RBP18.2■□□□□ 0.5
NID1-201ENST00000264187 NUCB2P80303 420 aa18.2■□□□□ 0.5
NID1-201ENST00000264187 SMC2O95347 1197 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms