RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 TRIM5Q9C035 493 aa21.86■■□□□ 1.09
ITGA6-201ENST00000264107 CARMIL1Q5VZK9 1371 aa21.86■■□□□ 1.09
ITGA6-201ENST00000264107 SKIDA1Q1XH10 827 aa21.86■■□□□ 1.09
ITGA6-201ENST00000264107 FAM184AQ8NB25 1140 aa21.86■■□□□ 1.09
ITGA6-201ENST00000264107 PLEKHG5O94827 1062 aa21.86■■□□□ 1.09
ITGA6-201ENST00000264107 RILPL2Q969X0 211 aa21.85■■□□□ 1.09
ITGA6-201ENST00000264107 CHMP4AQ9BY43 222 aa21.85■■□□□ 1.09
ITGA6-201ENST00000264107 CLSTN1O94985 981 aa21.85■■□□□ 1.09
ITGA6-201ENST00000264107 LETM1O95202 739 aaPredicted RBP21.85■■□□□ 1.09
ITGA6-201ENST00000264107 GPATCH3Q96I76 525 aa21.85■■□□□ 1.09
ITGA6-201ENST00000264107 PLCD4Q9BRC7 762 aa21.85■■□□□ 1.09
ITGA6-201ENST00000264107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.84■■□□□ 1.09
ITGA6-201ENST00000264107 CDR1P51861 262 aa21.84■■□□□ 1.09
ITGA6-201ENST00000264107 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
ITGA6-201ENST00000264107 SPC24Q8NBT2 197 aa21.84■■□□□ 1.09
ITGA6-201ENST00000264107 GPATCH11Q8N954 259 aa21.83■■□□□ 1.09
ITGA6-201ENST00000264107 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
ITGA6-201ENST00000264107 CUX2O14529 1486 aa21.82■■□□□ 1.08
ITGA6-201ENST00000264107 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
ITGA6-201ENST00000264107 IPO7O95373 1038 aaKnown RBP21.82■■□□□ 1.08
ITGA6-201ENST00000264107 ARHGAP35Q9NRY4 1499 aa21.81■■□□□ 1.08
ITGA6-201ENST00000264107 IRX3P78415 501 aaPredicted RBP21.81■■□□□ 1.08
ITGA6-201ENST00000264107 DCTN1Q14203 1278 aa21.81■■□□□ 1.08
ITGA6-201ENST00000264107 PKD2Q13563 968 aa21.81■■□□□ 1.08
ITGA6-201ENST00000264107 GIMAP7Q8NHV1 300 aa21.8■■□□□ 1.08
ITGA6-201ENST00000264107 FBXW7Q969H0 707 aa21.8■■□□□ 1.08
ITGA6-201ENST00000264107 VPS37CA5D8V6 355 aaPredicted RBP21.8■■□□□ 1.08
ITGA6-201ENST00000264107 RASSF8Q8NHQ8 419 aa21.79■■□□□ 1.08
ITGA6-201ENST00000264107 KIAA0754O94854 1291 aa21.79■■□□□ 1.08
ITGA6-201ENST00000264107 XPCQ01831 940 aaPredicted RBP21.79■■□□□ 1.08
ITGA6-201ENST00000264107 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
ITGA6-201ENST00000264107 CLCN1P35523 988 aa21.78■■□□□ 1.08
ITGA6-201ENST00000264107 AXDND1Q5T1B0 1012 aaPredicted RBP21.78■■□□□ 1.08
ITGA6-201ENST00000264107 RTF1Q92541 710 aaKnown RBP21.78■■□□□ 1.08
ITGA6-201ENST00000264107 DDX19BQ9UMR2 479 aa21.78■■□□□ 1.08
ITGA6-201ENST00000264107 SMC3Q9UQE7 1217 aa21.78■■□□□ 1.08
ITGA6-201ENST00000264107 PPP4R3BQ5MIZ7 849 aa21.77■■□□□ 1.08
ITGA6-201ENST00000264107 A0A0G2JS52 829 aa21.76■■□□□ 1.07
ITGA6-201ENST00000264107 SLC4A10Q6U841 1118 aa21.76■■□□□ 1.07
ITGA6-201ENST00000264107 PDIA4P13667 645 aaKnown RBP21.76■■□□□ 1.07
ITGA6-201ENST00000264107 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
ITGA6-201ENST00000264107 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
ITGA6-201ENST00000264107 DYNC1I1O14576 645 aa21.75■■□□□ 1.07
ITGA6-201ENST00000264107 FMN1Q68DA7 1419 aa21.75■■□□□ 1.07
ITGA6-201ENST00000264107 INTS3Q68E01 1043 aaKnown RBP21.75■■□□□ 1.07
ITGA6-201ENST00000264107 CEP89Q96ST8 783 aa21.75■■□□□ 1.07
ITGA6-201ENST00000264107 DNAJC2Q99543 621 aaKnown RBP21.74■■□□□ 1.07
ITGA6-201ENST00000264107 TIGD1Q96MW7 591 aa21.74■■□□□ 1.07
ITGA6-201ENST00000264107 CCP110O43303 1012 aa21.74■■□□□ 1.07
ITGA6-201ENST00000264107 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
ITGA6-201ENST00000264107 PLCD3Q8N3E9 789 aa21.73■■□□□ 1.07
ITGA6-201ENST00000264107 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
ITGA6-201ENST00000264107 LNPKQ9C0E8 428 aa21.73■■□□□ 1.07
ITGA6-201ENST00000264107 DZIP1LQ8IYY4 767 aaKnown RBP21.72■■□□□ 1.07
ITGA6-201ENST00000264107 CCDC73Q6ZRK6 1079 aa21.72■■□□□ 1.07
ITGA6-201ENST00000264107 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
ITGA6-201ENST00000264107 NAT10Q9H0A0 1025 aaKnown RBP21.72■■□□□ 1.07
ITGA6-201ENST00000264107 STK31Q9BXU1 1019 aa21.71■■□□□ 1.07
ITGA6-201ENST00000264107 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
ITGA6-201ENST00000264107 EIF3JO75822 258 aaKnown RBP21.71■■□□□ 1.07
ITGA6-201ENST00000264107 IPO4Q8TEX9 1081 aaKnown RBP21.7■■□□□ 1.06
ITGA6-201ENST00000264107 ANO2Q9NQ90 1003 aa21.7■■□□□ 1.06
ITGA6-201ENST00000264107 APAF1O14727 1248 aa21.7■■□□□ 1.06
ITGA6-201ENST00000264107 CT47B1P0C2W7 299 aaPredicted RBP21.7■■□□□ 1.06
ITGA6-201ENST00000264107 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
ITGA6-201ENST00000264107 AAMPQ13685 434 aa21.7■■□□□ 1.06
ITGA6-201ENST00000264107 PDILTQ8N807 584 aa21.69■■□□□ 1.06
ITGA6-201ENST00000264107 PANK1Q8TE04 598 aa21.68■■□□□ 1.06
ITGA6-201ENST00000264107 ANKRD20A12PQ8NF67 263 aa21.68■■□□□ 1.06
ITGA6-201ENST00000264107 CHMP4CQ96CF2 233 aa21.68■■□□□ 1.06
ITGA6-201ENST00000264107 CDC45O75419 566 aa21.68■■□□□ 1.06
ITGA6-201ENST00000264107 GTF2A1P52655 376 aaPredicted RBP21.68■■□□□ 1.06
ITGA6-201ENST00000264107 RBM25P49756 843 aaKnown RBP21.68■■□□□ 1.06
ITGA6-201ENST00000264107 PANK3Q9H999 370 aa21.67■■□□□ 1.06
ITGA6-201ENST00000264107 CAGE1Q8TC20 777 aa21.67■■□□□ 1.06
ITGA6-201ENST00000264107 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
ITGA6-201ENST00000264107 CIZ1Q9ULV3 898 aaPredicted RBP21.66■■□□□ 1.06
ITGA6-201ENST00000264107 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
ITGA6-201ENST00000264107 PCMTD1Q96MG8 357 aaPredicted RBP21.66■■□□□ 1.06
ITGA6-201ENST00000264107 CENPHQ9H3R5 247 aa21.66■■□□□ 1.06
ITGA6-201ENST00000264107 ZKSCAN1P17029 563 aaPredicted RBP21.66■■□□□ 1.06
ITGA6-201ENST00000264107 GTF2F1P35269 517 aaKnown RBP eCLIP21.66■■□□□ 1.06
ITGA6-201ENST00000264107 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
ITGA6-201ENST00000264107 ERLIN1O75477 346 aa21.65■■□□□ 1.06
ITGA6-201ENST00000264107 SMC2O95347 1197 aa21.65■■□□□ 1.06
ITGA6-201ENST00000264107 ST20-MTHFSA0A0A6YYL1 179 aa21.65■■□□□ 1.06
ITGA6-201ENST00000264107 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
ITGA6-201ENST00000264107 GTPBP4Q9BZE4 634 aaKnown RBP21.64■■□□□ 1.06
ITGA6-201ENST00000264107 TNNT1P13805 278 aa21.64■■□□□ 1.05
ITGA6-201ENST00000264107 NBPF1Q3BBV0 1214 aa21.64■■□□□ 1.05
ITGA6-201ENST00000264107 TMCO3Q6UWJ1 677 aa21.64■■□□□ 1.05
ITGA6-201ENST00000264107 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.05
ITGA6-201ENST00000264107 CCDC192P0DO97 292 aa21.63■■□□□ 1.05
ITGA6-201ENST00000264107 CCDC27Q2M243 656 aa21.63■■□□□ 1.05
ITGA6-201ENST00000264107 TTLL5Q6EMB2 1281 aa21.63■■□□□ 1.05
ITGA6-201ENST00000264107 RABEP1Q15276 862 aa21.63■■□□□ 1.05
ITGA6-201ENST00000264107 HOOK1Q9UJC3 728 aaKnown RBP21.63■■□□□ 1.05
ITGA6-201ENST00000264107 K7ELQ4 463 aaPredicted RBP21.62■■□□□ 1.05
ITGA6-201ENST00000264107 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
ITGA6-201ENST00000264107 DYDC1Q8WWB3 177 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms