RNA–Protein interactions for RNA: ENST00000256497.8

EDEM1-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDEM1, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-201ENST00000256497 KIF15Q9NS87 1388 aa22.29■■□□□ 1.16
EDEM1-201ENST00000256497 AK7Q96M32 723 aa22.29■■□□□ 1.16
EDEM1-201ENST00000256497 FBXW7Q969H0 707 aa22.29■■□□□ 1.16
EDEM1-201ENST00000256497 RUFY1Q96T51 708 aa22.29■■□□□ 1.16
EDEM1-201ENST00000256497 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
EDEM1-201ENST00000256497 BICD2Q8TD16 824 aa22.28■■□□□ 1.16
EDEM1-201ENST00000256497 ACBD3Q9H3P7 528 aa22.28■■□□□ 1.16
EDEM1-201ENST00000256497 RNF214Q8ND24 703 aa22.28■■□□□ 1.16
EDEM1-201ENST00000256497 H0YHG0 523 aa22.27■■□□□ 1.16
EDEM1-201ENST00000256497 TRAK2O60296 914 aa22.27■■□□□ 1.16
EDEM1-201ENST00000256497 TOMM22Q9NS69 142 aa22.27■■□□□ 1.16
EDEM1-201ENST00000256497 FRAT2O75474 233 aaPredicted RBP22.26■■□□□ 1.15
EDEM1-201ENST00000256497 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
EDEM1-201ENST00000256497 CGNL1Q0VF96 1302 aa22.26■■□□□ 1.15
EDEM1-201ENST00000256497 RDXP35241 583 aaKnown RBP22.25■■□□□ 1.15
EDEM1-201ENST00000256497 NUCB2P80303 420 aa22.25■■□□□ 1.15
EDEM1-201ENST00000256497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.25■■□□□ 1.15
EDEM1-201ENST00000256497 PRKRIP1Q9H875 184 aaPredicted RBP22.25■■□□□ 1.15
EDEM1-201ENST00000256497 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
EDEM1-201ENST00000256497 SASS6Q6UVJ0 657 aa22.25■■□□□ 1.15
EDEM1-201ENST00000256497 LTV1Q96GA3 475 aaPredicted RBP22.25■■□□□ 1.15
EDEM1-201ENST00000256497 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
EDEM1-201ENST00000256497 EID1Q9Y6B2 187 aa22.24■■□□□ 1.15
EDEM1-201ENST00000256497 IPO7O95373 1038 aaKnown RBP22.24■■□□□ 1.15
EDEM1-201ENST00000256497 PCMTD1Q96MG8 357 aaPredicted RBP22.24■■□□□ 1.15
EDEM1-201ENST00000256497 NGDNQ8NEJ9 315 aaKnown RBP22.23■■□□□ 1.15
EDEM1-201ENST00000256497 C22orf23Q9BZE7 217 aa22.22■■□□□ 1.15
EDEM1-201ENST00000256497 REC8O95072 547 aa22.22■■□□□ 1.15
EDEM1-201ENST00000256497 MAPK8IP2Q13387 824 aaPredicted RBP22.22■■□□□ 1.15
EDEM1-201ENST00000256497 RRP9O43818 475 aaKnown RBP22.21■■□□□ 1.15
EDEM1-201ENST00000256497 ATAD2BQ9ULI0 1458 aa22.21■■□□□ 1.15
EDEM1-201ENST00000256497 E9PSI1 815 aa22.21■■□□□ 1.15
EDEM1-201ENST00000256497 CCDC173Q0VFZ6 552 aa22.2■■□□□ 1.14
EDEM1-201ENST00000256497 VPS37CA5D8V6 355 aaPredicted RBP22.19■■□□□ 1.14
EDEM1-201ENST00000256497 CAVIN1Q6NZI2 390 aaKnown RBP22.19■■□□□ 1.14
EDEM1-201ENST00000256497 ANO2Q9NQ90 1003 aa22.18■■□□□ 1.14
EDEM1-201ENST00000256497 MARCH6O60337 910 aa22.18■■□□□ 1.14
EDEM1-201ENST00000256497 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
EDEM1-201ENST00000256497 HDAC5Q9UQL6 1122 aa22.17■■□□□ 1.14
EDEM1-201ENST00000256497 ELL2O00472 640 aaPredicted RBP22.17■■□□□ 1.14
EDEM1-201ENST00000256497 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
EDEM1-201ENST00000256497 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 CDR1P51861 262 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 UQCRHLA0A096LP55 91 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 UQCRHP07919 91 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 LEKR1Q6ZMV7 388 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 CCDC191Q8NCU4 936 aa22.16■■□□□ 1.14
EDEM1-201ENST00000256497 HSP90AB3PQ58FF7 597 aa22.15■■□□□ 1.14
EDEM1-201ENST00000256497 HMGN5P82970 282 aaKnown RBP22.15■■□□□ 1.14
EDEM1-201ENST00000256497 EIF3AQ14152 1382 aaKnown RBP22.15■■□□□ 1.14
EDEM1-201ENST00000256497 FBXO3Q9UK99 471 aa22.15■■□□□ 1.14
EDEM1-201ENST00000256497 ANKRD20A12PQ8NF67 263 aa22.14■■□□□ 1.14
EDEM1-201ENST00000256497 SMC3Q9UQE7 1217 aa22.14■■□□□ 1.13
EDEM1-201ENST00000256497 TERF2IPQ9NYB0 399 aa22.14■■□□□ 1.13
EDEM1-201ENST00000256497 LMOD3Q0VAK6 560 aa22.13■■□□□ 1.13
EDEM1-201ENST00000256497 VPS53Q5VIR6 699 aa22.13■■□□□ 1.13
EDEM1-201ENST00000256497 PLCD4Q9BRC7 762 aa22.12■■□□□ 1.13
EDEM1-201ENST00000256497 AMPHP49418 695 aa22.12■■□□□ 1.13
EDEM1-201ENST00000256497 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
EDEM1-201ENST00000256497 CHMP4CQ96CF2 233 aa22.12■■□□□ 1.13
EDEM1-201ENST00000256497 PANK3Q9H999 370 aa22.12■■□□□ 1.13
EDEM1-201ENST00000256497 SKIDA1Q1XH10 827 aa22.11■■□□□ 1.13
EDEM1-201ENST00000256497 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
EDEM1-201ENST00000256497 TSPY26PQ9H489 355 aa22.11■■□□□ 1.13
EDEM1-201ENST00000256497 DDX19BQ9UMR2 479 aa22.11■■□□□ 1.13
EDEM1-201ENST00000256497 ZKSCAN1P17029 563 aaPredicted RBP22.1■■□□□ 1.13
EDEM1-201ENST00000256497 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
EDEM1-201ENST00000256497 FOSBP53539 338 aa22.1■■□□□ 1.13
EDEM1-201ENST00000256497 AKAP17AQ02040 695 aaKnown RBP22.09■■□□□ 1.13
EDEM1-201ENST00000256497 TSPYL1Q9H0U9 437 aa22.09■■□□□ 1.13
EDEM1-201ENST00000256497 NAP1L1P55209 391 aaKnown RBP22.09■■□□□ 1.13
EDEM1-201ENST00000256497 PDILTQ8N807 584 aa22.09■■□□□ 1.13
EDEM1-201ENST00000256497 ERCC4Q92889 916 aaPredicted RBP22.09■■□□□ 1.13
EDEM1-201ENST00000256497 PTPRGP23470 1445 aa22.09■■□□□ 1.13
EDEM1-201ENST00000256497 TRIM5Q9C035 493 aa22.09■■□□□ 1.13
EDEM1-201ENST00000256497 CCDC73Q6ZRK6 1079 aa22.08■■□□□ 1.13
EDEM1-201ENST00000256497 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
EDEM1-201ENST00000256497 INTS3Q68E01 1043 aaKnown RBP22.08■■□□□ 1.13
EDEM1-201ENST00000256497 HOOK1Q9UJC3 728 aaKnown RBP22.08■■□□□ 1.12
EDEM1-201ENST00000256497 DCTN1Q14203 1278 aa22.07■■□□□ 1.12
EDEM1-201ENST00000256497 TRIM29Q14134 588 aa22.07■■□□□ 1.12
EDEM1-201ENST00000256497 CAGE1Q8TC20 777 aa22.07■■□□□ 1.12
EDEM1-201ENST00000256497 RUFY2Q8WXA3 655 aa22.07■■□□□ 1.12
EDEM1-201ENST00000256497 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
EDEM1-201ENST00000256497 TTLL5Q6EMB2 1281 aa22.06■■□□□ 1.12
EDEM1-201ENST00000256497 DZIP1LQ8IYY4 767 aaKnown RBP22.06■■□□□ 1.12
EDEM1-201ENST00000256497 GRPEL1Q9HAV7 217 aa22.06■■□□□ 1.12
EDEM1-201ENST00000256497 APAF1O14727 1248 aa22.06■■□□□ 1.12
EDEM1-201ENST00000256497 SPC24Q8NBT2 197 aa22.06■■□□□ 1.12
EDEM1-201ENST00000256497 LNPKQ9C0E8 428 aa22.06■■□□□ 1.12
EDEM1-201ENST00000256497 PRPF40AO75400 957 aaKnown RBP22.05■■□□□ 1.12
EDEM1-201ENST00000256497 ERICH4A6NGS2 130 aa22.05■■□□□ 1.12
EDEM1-201ENST00000256497 ST20-MTHFSA0A0A6YYL1 179 aa22.05■■□□□ 1.12
EDEM1-201ENST00000256497 PRDM10Q9NQV6 1147 aa22.05■■□□□ 1.12
EDEM1-201ENST00000256497 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
EDEM1-201ENST00000256497 MPNDQ8N594 471 aa22.04■■□□□ 1.12
EDEM1-201ENST00000256497 NAT10Q9H0A0 1025 aaKnown RBP22.03■■□□□ 1.12
EDEM1-201ENST00000256497 AXDND1Q5T1B0 1012 aaPredicted RBP22.03■■□□□ 1.12
EDEM1-201ENST00000256497 SYNE3Q6ZMZ3 975 aa22.03■■□□□ 1.12
EDEM1-201ENST00000256497 CPLX1O14810 134 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms