RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 TRIM34Q9BYJ4 488 aa13.86□□□□□ -0.19
LAMA5-201ENST00000252999 DHX16O60231 1041 aaKnown RBP13.86□□□□□ -0.19
LAMA5-201ENST00000252999 CPLX2Q6PUV4 134 aaKnown RBP13.85□□□□□ -0.19
LAMA5-201ENST00000252999 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
LAMA5-201ENST00000252999 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
LAMA5-201ENST00000252999 AXDND1Q5T1B0 1012 aaPredicted RBP13.85□□□□□ -0.19
LAMA5-201ENST00000252999 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.85□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC39Q9UFE4 941 aa13.85□□□□□ -0.19
LAMA5-201ENST00000252999 PKD2Q13563 968 aa13.85□□□□□ -0.19
LAMA5-201ENST00000252999 ZKSCAN1P17029 563 aaPredicted RBP13.84□□□□□ -0.19
LAMA5-201ENST00000252999 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
LAMA5-201ENST00000252999 MTERF4Q7Z6M4 381 aaKnown RBP13.84□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC73Q6ZRK6 1079 aa13.84□□□□□ -0.19
LAMA5-201ENST00000252999 LEKR1Q6ZMV7 388 aa13.83□□□□□ -0.19
LAMA5-201ENST00000252999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.83□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.19
LAMA5-201ENST00000252999 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
LAMA5-201ENST00000252999 OFD1O75665 1012 aa13.83□□□□□ -0.2
LAMA5-201ENST00000252999 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
LAMA5-201ENST00000252999 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
LAMA5-201ENST00000252999 PDE3BQ13370 1112 aa13.82□□□□□ -0.2
LAMA5-201ENST00000252999 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
LAMA5-201ENST00000252999 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
LAMA5-201ENST00000252999 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
LAMA5-201ENST00000252999 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
LAMA5-201ENST00000252999 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
LAMA5-201ENST00000252999 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
LAMA5-201ENST00000252999 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
LAMA5-201ENST00000252999 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
LAMA5-201ENST00000252999 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
LAMA5-201ENST00000252999 TNIKQ9UKE5 1360 aa13.81□□□□□ -0.2
LAMA5-201ENST00000252999 RBM10P98175 930 aaKnown RBP13.81□□□□□ -0.2
LAMA5-201ENST00000252999 OLFM4Q6UX06 510 aa13.81□□□□□ -0.2
LAMA5-201ENST00000252999 GON4LQ3T8J9 2241 aa13.8□□□□□ -0.2
LAMA5-201ENST00000252999 TERF2IPQ9NYB0 399 aa13.8□□□□□ -0.2
LAMA5-201ENST00000252999 ERCC4Q92889 916 aaPredicted RBP13.8□□□□□ -0.2
LAMA5-201ENST00000252999 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
LAMA5-201ENST00000252999 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
LAMA5-201ENST00000252999 SMC3Q9UQE7 1217 aa13.8□□□□□ -0.2
LAMA5-201ENST00000252999 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
LAMA5-201ENST00000252999 AMPHP49418 695 aa13.8□□□□□ -0.2
LAMA5-201ENST00000252999 SMC2O95347 1197 aa13.79□□□□□ -0.2
LAMA5-201ENST00000252999 EXOC6Q8TAG9 804 aa13.79□□□□□ -0.2
LAMA5-201ENST00000252999 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
LAMA5-201ENST00000252999 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
LAMA5-201ENST00000252999 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
LAMA5-201ENST00000252999 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
LAMA5-201ENST00000252999 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
LAMA5-201ENST00000252999 ZRSR2Q15696 482 aaKnown RBP13.78□□□□□ -0.2
LAMA5-201ENST00000252999 TRDNQ13061 729 aa13.78□□□□□ -0.2
LAMA5-201ENST00000252999 ZKSCAN2Q63HK3 967 aa13.78□□□□□ -0.2
LAMA5-201ENST00000252999 TRIM5Q9C035 493 aa13.78□□□□□ -0.2
LAMA5-201ENST00000252999 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
LAMA5-201ENST00000252999 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
LAMA5-201ENST00000252999 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
LAMA5-201ENST00000252999 COG6Q9Y2V7 657 aa13.77□□□□□ -0.2
LAMA5-201ENST00000252999 NGEFQ8N5V2 710 aa13.77□□□□□ -0.2
LAMA5-201ENST00000252999 KIF15Q9NS87 1388 aa13.77□□□□□ -0.21
LAMA5-201ENST00000252999 VPS37DQ86XT2 251 aa13.77□□□□□ -0.21
LAMA5-201ENST00000252999 GGT6Q6P531 493 aa13.77□□□□□ -0.21
LAMA5-201ENST00000252999 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
LAMA5-201ENST00000252999 ENOX2Q16206 610 aaKnown RBP13.77□□□□□ -0.21
LAMA5-201ENST00000252999 IFIT2P09913 472 aaKnown RBP13.77□□□□□ -0.21
LAMA5-201ENST00000252999 NEFHP12036 1026 aa13.77□□□□□ -0.21
LAMA5-201ENST00000252999 SAMD1Q6SPF0 538 aaPredicted RBP13.76□□□□□ -0.21
LAMA5-201ENST00000252999 CENPHQ9H3R5 247 aa13.76□□□□□ -0.21
LAMA5-201ENST00000252999 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
LAMA5-201ENST00000252999 GOLGA6L10A6NI86 522 aa13.76□□□□□ -0.21
LAMA5-201ENST00000252999 NUCB2P80303 420 aa13.76□□□□□ -0.21
LAMA5-201ENST00000252999 DYDC1Q8WWB3 177 aa13.75□□□□□ -0.21
LAMA5-201ENST00000252999 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
LAMA5-201ENST00000252999 SDF4Q9BRK5 362 aa13.75□□□□□ -0.21
LAMA5-201ENST00000252999 CAVIN1Q6NZI2 390 aaKnown RBP13.74□□□□□ -0.21
LAMA5-201ENST00000252999 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
LAMA5-201ENST00000252999 PAF1Q8N7H5 531 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 RAB3GAP2Q9H2M9 1393 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 ANKRD62A6NC57 917 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 SPC24Q8NBT2 197 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 SEPT7Q16181 437 aaKnown RBP13.73□□□□□ -0.21
LAMA5-201ENST00000252999 KDM4AO75164 1064 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 ERICH2A1L162 156 aa13.73□□□□□ -0.21
LAMA5-201ENST00000252999 NUP155O75694 1391 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 MRE11P49959 708 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 ERICH4A6NGS2 130 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
LAMA5-201ENST00000252999 NFKBIBQ15653 356 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 TAF3Q5VWG9 929 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 C22orf23Q9BZE7 217 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 GOLGA6L7A0A1B0GV03 622 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 FAM193AP78312 1265 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 ERLIN2O94905 339 aa13.72□□□□□ -0.21
LAMA5-201ENST00000252999 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
LAMA5-201ENST00000252999 NEXNQ0ZGT2 675 aa13.71□□□□□ -0.21
LAMA5-201ENST00000252999 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.21
LAMA5-201ENST00000252999 NUTM2FA1L443 756 aa13.71□□□□□ -0.21
LAMA5-201ENST00000252999 CCP110O43303 1012 aa13.71□□□□□ -0.22
LAMA5-201ENST00000252999 HMGN5P82970 282 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms