RNA–Protein interactions for RNA: ENST00000252457.9

CDC16-201, Transcript of cell division cycle 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC16, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-201ENST00000252457 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
CDC16-201ENST00000252457 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
CDC16-201ENST00000252457 BCANQ96GW7 911 aa17.18■□□□□ 0.34
CDC16-201ENST00000252457 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
CDC16-201ENST00000252457 DAPK1P53355 1430 aa17.16■□□□□ 0.34
CDC16-201ENST00000252457 PIK3R4Q99570 1358 aa17.16■□□□□ 0.34
CDC16-201ENST00000252457 CADPS2Q86UW7 1296 aa17.16■□□□□ 0.34
CDC16-201ENST00000252457 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
CDC16-201ENST00000252457 APLP2Q06481 763 aa17.13■□□□□ 0.33
CDC16-201ENST00000252457 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
CDC16-201ENST00000252457 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
CDC16-201ENST00000252457 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
CDC16-201ENST00000252457 ZFYVE9O95405 1425 aa17.12■□□□□ 0.33
CDC16-201ENST00000252457 UPF1Q92900 1129 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDC16-201ENST00000252457 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
CDC16-201ENST00000252457 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
CDC16-201ENST00000252457 CFAP65Q6ZU64 1925 aaKnown RBP17.11■□□□□ 0.33
CDC16-201ENST00000252457 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
CDC16-201ENST00000252457 ATF3P18847 181 aa17.1■□□□□ 0.33
CDC16-201ENST00000252457 RIMS2Q9UQ26 1411 aa17.1■□□□□ 0.33
CDC16-201ENST00000252457 RXRBP28702 533 aa17.09■□□□□ 0.33
CDC16-201ENST00000252457 COL16A1Q07092 1604 aaPredicted RBP17.08■□□□□ 0.33
CDC16-201ENST00000252457 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.33
CDC16-201ENST00000252457 C14orf37Q86TY3 774 aa17.08■□□□□ 0.33
CDC16-201ENST00000252457 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.33
CDC16-201ENST00000252457 ADGRL2O95490 1459 aa17.08■□□□□ 0.32
CDC16-201ENST00000252457 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
CDC16-201ENST00000252457 DCCP43146 1447 aa17.05■□□□□ 0.32
CDC16-201ENST00000252457 FOXD1Q16676 465 aa17.05■□□□□ 0.32
CDC16-201ENST00000252457 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
CDC16-201ENST00000252457 LRP6O75581 1613 aa17.03■□□□□ 0.32
CDC16-201ENST00000252457 ANKRD50Q9ULJ7 1429 aa17.02■□□□□ 0.32
CDC16-201ENST00000252457 SHPRHQ149N8 1683 aa17.02■□□□□ 0.32
CDC16-201ENST00000252457 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
CDC16-201ENST00000252457 TRIM52Q96A61 297 aa17.01■□□□□ 0.31
CDC16-201ENST00000252457 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
CDC16-201ENST00000252457 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
CDC16-201ENST00000252457 TMEM131LA2VDJ0 1609 aa16.99■□□□□ 0.31
CDC16-201ENST00000252457 LRRC59Q96AG4 307 aaKnown RBP16.99■□□□□ 0.31
CDC16-201ENST00000252457 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
CDC16-201ENST00000252457 SETD1AO15047 1707 aaKnown RBP16.99■□□□□ 0.31
CDC16-201ENST00000252457 TRPM2O94759 1503 aa16.98■□□□□ 0.31
CDC16-201ENST00000252457 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
CDC16-201ENST00000252457 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
CDC16-201ENST00000252457 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.3
CDC16-201ENST00000252457 AFF2P51816 1311 aa16.95■□□□□ 0.3
CDC16-201ENST00000252457 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
CDC16-201ENST00000252457 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
CDC16-201ENST00000252457 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
CDC16-201ENST00000252457 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
CDC16-201ENST00000252457 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
CDC16-201ENST00000252457 ASXL1Q8IXJ9 1541 aa16.92■□□□□ 0.3
CDC16-201ENST00000252457 GCC2Q8IWJ2 1684 aa16.92■□□□□ 0.3
CDC16-201ENST00000252457 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
CDC16-201ENST00000252457 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
CDC16-201ENST00000252457 UNC13BO14795 1591 aa16.9■□□□□ 0.3
CDC16-201ENST00000252457 MST1RQ04912 1400 aa16.9■□□□□ 0.3
CDC16-201ENST00000252457 LOC105371045A0A1W2PR82 267 aa16.89■□□□□ 0.29
CDC16-201ENST00000252457 FAM50AQ14320 339 aaKnown RBP16.89■□□□□ 0.29
CDC16-201ENST00000252457 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
CDC16-201ENST00000252457 PTPRUQ92729 1446 aa16.88■□□□□ 0.29
CDC16-201ENST00000252457 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
CDC16-201ENST00000252457 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
CDC16-201ENST00000252457 SETBP1Q9Y6X0 1596 aa16.87■□□□□ 0.29
CDC16-201ENST00000252457 RGS12O14924 1447 aa16.86■□□□□ 0.29
CDC16-201ENST00000252457 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
CDC16-201ENST00000252457 C8orf37Q96NL8 207 aa16.86■□□□□ 0.29
CDC16-201ENST00000252457 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
CDC16-201ENST00000252457 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
CDC16-201ENST00000252457 PTCH1Q13635 1447 aa16.84■□□□□ 0.29
CDC16-201ENST00000252457 NUTM2DQ5VT03 806 aaPredicted RBP16.84■□□□□ 0.29
CDC16-201ENST00000252457 XRN1Q8IZH2 1706 aaKnown RBP16.83■□□□□ 0.29
CDC16-201ENST00000252457 IQGAP3Q86VI3 1631 aa16.83■□□□□ 0.28
CDC16-201ENST00000252457 MYO5BQ9ULV0 1848 aa16.83■□□□□ 0.28
CDC16-201ENST00000252457 NUP155O75694 1391 aa16.83■□□□□ 0.28
CDC16-201ENST00000252457 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
CDC16-201ENST00000252457 E9PCH4 1651 aa16.81■□□□□ 0.28
CDC16-201ENST00000252457 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
CDC16-201ENST00000252457 SOS2Q07890 1332 aaPredicted RBP16.8■□□□□ 0.28
CDC16-201ENST00000252457 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
CDC16-201ENST00000252457 USP21Q9UK80 565 aa16.79■□□□□ 0.28
CDC16-201ENST00000252457 METP08581 1390 aa16.78■□□□□ 0.28
CDC16-201ENST00000252457 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
CDC16-201ENST00000252457 LAMC1P11047 1609 aa16.77■□□□□ 0.28
CDC16-201ENST00000252457 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.28
CDC16-201ENST00000252457 NRXN3Q9Y4C0 1643 aa16.75■□□□□ 0.27
CDC16-201ENST00000252457 ATRNO75882 1429 aa16.75■□□□□ 0.27
CDC16-201ENST00000252457 ADAMTS2O95450 1211 aa16.75■□□□□ 0.27
CDC16-201ENST00000252457 VGFO15240 615 aaPredicted RBP16.74■□□□□ 0.27
CDC16-201ENST00000252457 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
CDC16-201ENST00000252457 HFM1A2PYH4 1435 aa16.72■□□□□ 0.27
CDC16-201ENST00000252457 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
CDC16-201ENST00000252457 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
CDC16-201ENST00000252457 DDX17Q92841 729 aaKnown RBP16.7■□□□□ 0.26
CDC16-201ENST00000252457 COL22A1Q8NFW1 1626 aaPredicted RBP16.68■□□□□ 0.26
CDC16-201ENST00000252457 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
CDC16-201ENST00000252457 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
CDC16-201ENST00000252457 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
CDC16-201ENST00000252457 MYOM2P54296 1465 aa16.67■□□□□ 0.26
CDC16-201ENST00000252457 SPHKAPQ2M3C7 1700 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms