RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 RIMS2Q9UQ26 1411 aa22.71■■□□□ 1.23
GATC-201ENST00000229384 HSPA1LP34931 641 aa22.7■■□□□ 1.22
GATC-201ENST00000229384 NWD1Q149M9 1564 aa22.7■■□□□ 1.22
GATC-201ENST00000229384 CHD2O14647 1828 aaKnown RBP22.69■■□□□ 1.22
GATC-201ENST00000229384 DISP3Q9P2K9 1392 aa22.69■■□□□ 1.22
GATC-201ENST00000229384 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
GATC-201ENST00000229384 KCNA6P17658 529 aa22.68■■□□□ 1.22
GATC-201ENST00000229384 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
GATC-201ENST00000229384 ILDR2Q71H61 639 aa22.63■■□□□ 1.21
GATC-201ENST00000229384 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
GATC-201ENST00000229384 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
GATC-201ENST00000229384 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
GATC-201ENST00000229384 ADAMTS13Q76LX8 1427 aa22.62■■□□□ 1.21
GATC-201ENST00000229384 TMEM94Q12767 1356 aa22.62■■□□□ 1.21
GATC-201ENST00000229384 NKTRP30414 1462 aaKnown RBP22.61■■□□□ 1.21
GATC-201ENST00000229384 HDGFP51858 240 aaKnown RBP22.6■■□□□ 1.21
GATC-201ENST00000229384 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
GATC-201ENST00000229384 NUTM2DQ5VT03 806 aaPredicted RBP22.59■■□□□ 1.21
GATC-201ENST00000229384 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.59■■□□□ 1.21
GATC-201ENST00000229384 TBX22Q9Y458 520 aa22.59■■□□□ 1.21
GATC-201ENST00000229384 RBM33Q96EV2 1170 aaKnown RBP22.58■■□□□ 1.21
GATC-201ENST00000229384 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
GATC-201ENST00000229384 PROSER2Q86WR7 435 aaPredicted RBP22.57■■□□□ 1.2
GATC-201ENST00000229384 BCANQ96GW7 911 aa22.57■■□□□ 1.2
GATC-201ENST00000229384 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
GATC-201ENST00000229384 TRPM2O94759 1503 aa22.57■■□□□ 1.2
GATC-201ENST00000229384 DIP2AQ14689 1571 aa22.56■■□□□ 1.2
GATC-201ENST00000229384 MED1Q15648 1581 aaPredicted RBP22.55■■□□□ 1.2
GATC-201ENST00000229384 KIF1BO60333 1816 aa22.54■■□□□ 1.2
GATC-201ENST00000229384 FAM135BQ49AJ0 1406 aa22.52■■□□□ 1.2
GATC-201ENST00000229384 SETBP1Q9Y6X0 1596 aa22.51■■□□□ 1.19
GATC-201ENST00000229384 NEXMIFQ5QGS0 1516 aa22.51■■□□□ 1.19
GATC-201ENST00000229384 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
GATC-201ENST00000229384 ROBO1Q9Y6N7 1651 aa22.5■■□□□ 1.19
GATC-201ENST00000229384 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
GATC-201ENST00000229384 TRIM52Q96A61 297 aa22.48■■□□□ 1.19
GATC-201ENST00000229384 XRN1Q8IZH2 1706 aaKnown RBP22.46■■□□□ 1.19
GATC-201ENST00000229384 NCOA3Q9Y6Q9 1424 aa22.46■■□□□ 1.19
GATC-201ENST00000229384 MSH6P52701 1360 aa22.45■■□□□ 1.18
GATC-201ENST00000229384 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
GATC-201ENST00000229384 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
GATC-201ENST00000229384 SLC4A1APQ9BWU0 796 aaKnown RBP22.43■■□□□ 1.18
GATC-201ENST00000229384 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
GATC-201ENST00000229384 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
GATC-201ENST00000229384 PPLO60437 1756 aa22.4■■□□□ 1.18
GATC-201ENST00000229384 METP08581 1390 aa22.4■■□□□ 1.18
GATC-201ENST00000229384 SLAIN2Q9P270 581 aa22.4■■□□□ 1.18
GATC-201ENST00000229384 SOCS7O14512 581 aa22.38■■□□□ 1.17
GATC-201ENST00000229384 FOXD1Q16676 465 aa22.38■■□□□ 1.17
GATC-201ENST00000229384 PHLPP1O60346 1717 aa22.36■■□□□ 1.17
GATC-201ENST00000229384 C19orf44Q9H6X5 657 aa22.35■■□□□ 1.17
GATC-201ENST00000229384 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.17
GATC-201ENST00000229384 RPGRIP1LQ68CZ1 1315 aa22.31■■□□□ 1.16
GATC-201ENST00000229384 COL16A1Q07092 1604 aaPredicted RBP22.31■■□□□ 1.16
GATC-201ENST00000229384 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
GATC-201ENST00000229384 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
GATC-201ENST00000229384 C14orf37Q86TY3 774 aa22.3■■□□□ 1.16
GATC-201ENST00000229384 CADPS2Q86UW7 1296 aa22.3■■□□□ 1.16
GATC-201ENST00000229384 NALCNQ8IZF0 1738 aa22.3■■□□□ 1.16
GATC-201ENST00000229384 SPATA31E1Q6ZUB1 1445 aa22.29■■□□□ 1.16
GATC-201ENST00000229384 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
GATC-201ENST00000229384 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
GATC-201ENST00000229384 DCCP43146 1447 aa22.28■■□□□ 1.16
GATC-201ENST00000229384 ATF3P18847 181 aa22.27■■□□□ 1.16
GATC-201ENST00000229384 AHDC1Q5TGY3 1603 aaPredicted RBP22.27■■□□□ 1.16
GATC-201ENST00000229384 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
GATC-201ENST00000229384 PRAG1Q86YV5 1406 aa22.25■■□□□ 1.15
GATC-201ENST00000229384 MST1RQ04912 1400 aa22.24■■□□□ 1.15
GATC-201ENST00000229384 ADGRL3Q9HAR2 1447 aa22.24■■□□□ 1.15
GATC-201ENST00000229384 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
GATC-201ENST00000229384 BRINP3Q76B58 766 aa22.22■■□□□ 1.15
GATC-201ENST00000229384 ADGRF5Q8IZF2 1346 aa22.22■■□□□ 1.15
GATC-201ENST00000229384 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
GATC-201ENST00000229384 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
GATC-201ENST00000229384 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
GATC-201ENST00000229384 JCADQ9P266 1359 aa22.21■■□□□ 1.15
GATC-201ENST00000229384 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.15
GATC-201ENST00000229384 ACIN1Q9UKV3 1341 aaKnown RBP22.2■■□□□ 1.14
GATC-201ENST00000229384 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
GATC-201ENST00000229384 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
GATC-201ENST00000229384 SHPRHQ149N8 1683 aa22.19■■□□□ 1.14
GATC-201ENST00000229384 ANKRD30BQ9BXX2 1392 aa22.15■■□□□ 1.14
GATC-201ENST00000229384 LRP6O75581 1613 aa22.14■■□□□ 1.14
GATC-201ENST00000229384 PIK3C2GO75747 1445 aa22.14■■□□□ 1.13
GATC-201ENST00000229384 LAMC1P11047 1609 aa22.13■■□□□ 1.13
GATC-201ENST00000229384 KNDC1Q76NI1 1749 aa22.12■■□□□ 1.13
GATC-201ENST00000229384 C1orf167Q5SNV9 1468 aa22.12■■□□□ 1.13
GATC-201ENST00000229384 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
GATC-201ENST00000229384 TECPR2O15040 1411 aa22.11■■□□□ 1.13
GATC-201ENST00000229384 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
GATC-201ENST00000229384 SPATA31A6Q5VVP1 1343 aa22.09■■□□□ 1.13
GATC-201ENST00000229384 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
GATC-201ENST00000229384 LRPPRCP42704 1394 aaKnown RBP22.08■■□□□ 1.12
GATC-201ENST00000229384 MYOM2P54296 1465 aa22.07■■□□□ 1.12
GATC-201ENST00000229384 HRCP23327 699 aa22.06■■□□□ 1.12
GATC-201ENST00000229384 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
GATC-201ENST00000229384 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
GATC-201ENST00000229384 CDC42BPGQ6DT37 1551 aa22.06■■□□□ 1.12
GATC-201ENST00000229384 ORAI2Q96SN7 254 aa22.04■■□□□ 1.12
GATC-201ENST00000229384 C14orf93Q9H972 538 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms