RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 ALKQ9UM73 1620 aa15.9■□□□□ 0.14
RPS13-201ENST00000228140 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
RPS13-201ENST00000228140 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
RPS13-201ENST00000228140 RIMS2Q9UQ26 1411 aa15.88■□□□□ 0.13
RPS13-201ENST00000228140 PPP1R15AO75807 674 aaPredicted RBP15.88■□□□□ 0.13
RPS13-201ENST00000228140 CHD2O14647 1828 aaKnown RBP15.88■□□□□ 0.13
RPS13-201ENST00000228140 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
RPS13-201ENST00000228140 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
RPS13-201ENST00000228140 BCANQ96GW7 911 aa15.87■□□□□ 0.13
RPS13-201ENST00000228140 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
RPS13-201ENST00000228140 KIF1BO60333 1816 aa15.85■□□□□ 0.13
RPS13-201ENST00000228140 KCNA6P17658 529 aa15.85■□□□□ 0.13
RPS13-201ENST00000228140 NAIPQ13075 1403 aa15.85■□□□□ 0.13
RPS13-201ENST00000228140 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
RPS13-201ENST00000228140 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
RPS13-201ENST00000228140 HFM1A2PYH4 1435 aa15.84■□□□□ 0.13
RPS13-201ENST00000228140 TRPM2O94759 1503 aa15.83■□□□□ 0.12
RPS13-201ENST00000228140 HSPA1LP34931 641 aa15.82■□□□□ 0.12
RPS13-201ENST00000228140 TMEM94Q12767 1356 aa15.81■□□□□ 0.12
RPS13-201ENST00000228140 CLTCL1P53675 1640 aa15.8■□□□□ 0.12
RPS13-201ENST00000228140 MED1Q15648 1581 aaPredicted RBP15.8■□□□□ 0.12
RPS13-201ENST00000228140 PROSER2Q86WR7 435 aaPredicted RBP15.79■□□□□ 0.12
RPS13-201ENST00000228140 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
RPS13-201ENST00000228140 TBX22Q9Y458 520 aa15.78■□□□□ 0.12
RPS13-201ENST00000228140 MSH6P52701 1360 aa15.77■□□□□ 0.12
RPS13-201ENST00000228140 ROBO1Q9Y6N7 1651 aa15.77■□□□□ 0.12
RPS13-201ENST00000228140 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.11
RPS13-201ENST00000228140 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.11
RPS13-201ENST00000228140 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
RPS13-201ENST00000228140 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
RPS13-201ENST00000228140 NCOA3Q9Y6Q9 1424 aa15.75■□□□□ 0.11
RPS13-201ENST00000228140 NEXMIFQ5QGS0 1516 aa15.73■□□□□ 0.11
RPS13-201ENST00000228140 ZNF326Q5BKZ1 582 aaKnown RBP15.73■□□□□ 0.11
RPS13-201ENST00000228140 TRIM52Q96A61 297 aa15.73■□□□□ 0.11
RPS13-201ENST00000228140 XRN1Q8IZH2 1706 aaKnown RBP15.73■□□□□ 0.11
RPS13-201ENST00000228140 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
RPS13-201ENST00000228140 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
RPS13-201ENST00000228140 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.71■□□□□ 0.1
RPS13-201ENST00000228140 PPLO60437 1756 aa15.7■□□□□ 0.1
RPS13-201ENST00000228140 PHLPP1O60346 1717 aa15.7■□□□□ 0.1
RPS13-201ENST00000228140 ACIN1Q9UKV3 1341 aaKnown RBP15.69■□□□□ 0.1
RPS13-201ENST00000228140 ILDR2Q71H61 639 aa15.69■□□□□ 0.1
RPS13-201ENST00000228140 SLC4A1APQ9BWU0 796 aaKnown RBP15.69■□□□□ 0.1
RPS13-201ENST00000228140 C14orf37Q86TY3 774 aa15.68■□□□□ 0.1
RPS13-201ENST00000228140 RBM33Q96EV2 1170 aaKnown RBP15.68■□□□□ 0.1
RPS13-201ENST00000228140 SOCS7O14512 581 aa15.67■□□□□ 0.1
RPS13-201ENST00000228140 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
RPS13-201ENST00000228140 SETD1AO15047 1707 aaKnown RBP15.65■□□□□ 0.1
RPS13-201ENST00000228140 CADPS2Q86UW7 1296 aa15.65■□□□□ 0.1
RPS13-201ENST00000228140 SLAIN2Q9P270 581 aa15.65■□□□□ 0.1
RPS13-201ENST00000228140 AMOTL2Q9Y2J4 779 aa15.65■□□□□ 0.1
RPS13-201ENST00000228140 DCCP43146 1447 aa15.65■□□□□ 0.1
RPS13-201ENST00000228140 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
RPS13-201ENST00000228140 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
RPS13-201ENST00000228140 RPGRIP1LQ68CZ1 1315 aa15.64■□□□□ 0.09
RPS13-201ENST00000228140 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
RPS13-201ENST00000228140 CCDC144AA2RUR9 1427 aa15.63■□□□□ 0.09
RPS13-201ENST00000228140 VGFO15240 615 aaPredicted RBP15.63■□□□□ 0.09
RPS13-201ENST00000228140 ATF3P18847 181 aa15.63■□□□□ 0.09
RPS13-201ENST00000228140 NALCNQ8IZF0 1738 aa15.62■□□□□ 0.09
RPS13-201ENST00000228140 COL16A1Q07092 1604 aaPredicted RBP15.61■□□□□ 0.09
RPS13-201ENST00000228140 AHDC1Q5TGY3 1603 aaPredicted RBP15.61■□□□□ 0.09
RPS13-201ENST00000228140 METP08581 1390 aa15.6■□□□□ 0.09
RPS13-201ENST00000228140 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
RPS13-201ENST00000228140 SHPRHQ149N8 1683 aa15.58■□□□□ 0.08
RPS13-201ENST00000228140 JCADQ9P266 1359 aa15.58■□□□□ 0.08
RPS13-201ENST00000228140 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
RPS13-201ENST00000228140 ADGRL3Q9HAR2 1447 aa15.58■□□□□ 0.08
RPS13-201ENST00000228140 MPHOSPH9Q99550 1183 aa15.57■□□□□ 0.08
RPS13-201ENST00000228140 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
RPS13-201ENST00000228140 NHSL1Q5SYE7 1610 aa15.57■□□□□ 0.08
RPS13-201ENST00000228140 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
RPS13-201ENST00000228140 MST1RQ04912 1400 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 SPATA31E1Q6ZUB1 1445 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 ANKRD30BQ9BXX2 1392 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 FOXD1Q16676 465 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 LAMC1P11047 1609 aa15.54■□□□□ 0.08
RPS13-201ENST00000228140 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
RPS13-201ENST00000228140 SPATA31A6Q5VVP1 1343 aa15.5■□□□□ 0.07
RPS13-201ENST00000228140 BRINP3Q76B58 766 aa15.5■□□□□ 0.07
RPS13-201ENST00000228140 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
RPS13-201ENST00000228140 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
RPS13-201ENST00000228140 PIK3C2GO75747 1445 aa15.48■□□□□ 0.07
RPS13-201ENST00000228140 MYOM2P54296 1465 aa15.47■□□□□ 0.07
RPS13-201ENST00000228140 TECPR2O15040 1411 aa15.47■□□□□ 0.07
RPS13-201ENST00000228140 RGL3Q3MIN7 710 aa15.47■□□□□ 0.07
RPS13-201ENST00000228140 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.06
RPS13-201ENST00000228140 ADGRF5Q8IZF2 1346 aa15.45■□□□□ 0.06
RPS13-201ENST00000228140 LRP6O75581 1613 aa15.44■□□□□ 0.06
RPS13-201ENST00000228140 RGS17Q9UGC6 210 aaPredicted RBP15.44■□□□□ 0.06
RPS13-201ENST00000228140 LRPPRCP42704 1394 aaKnown RBP15.44■□□□□ 0.06
RPS13-201ENST00000228140 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
RPS13-201ENST00000228140 LRRC59Q96AG4 307 aaKnown RBP15.43■□□□□ 0.06
RPS13-201ENST00000228140 NRXN1Q9ULB1 1477 aa15.43■□□□□ 0.06
RPS13-201ENST00000228140 FMN2Q9NZ56 1722 aa15.42■□□□□ 0.06
RPS13-201ENST00000228140 ABCC11Q96J66 1382 aa15.41■□□□□ 0.06
RPS13-201ENST00000228140 HRCP23327 699 aa15.41■□□□□ 0.06
RPS13-201ENST00000228140 YTHDC2Q9H6S0 1430 aaKnown RBP15.41■□□□□ 0.06
RPS13-201ENST00000228140 KIF1AQ12756 1690 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms