RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CCAR2Q8N163 923 aaKnown RBP16.27■□□□□ 0.19
COL1A1-201ENST00000225964 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.19
COL1A1-201ENST00000225964 TPM1P09493 284 aa16.26■□□□□ 0.19
COL1A1-201ENST00000225964 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
COL1A1-201ENST00000225964 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
COL1A1-201ENST00000225964 CHMP4CQ96CF2 233 aa16.25■□□□□ 0.19
COL1A1-201ENST00000225964 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
COL1A1-201ENST00000225964 IFIT2P09913 472 aaKnown RBP16.24■□□□□ 0.19
COL1A1-201ENST00000225964 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
COL1A1-201ENST00000225964 NFXL1Q6ZNB6 911 aa16.24■□□□□ 0.19
COL1A1-201ENST00000225964 CCDC47Q96A33 483 aaKnown RBP16.23■□□□□ 0.19
COL1A1-201ENST00000225964 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
COL1A1-201ENST00000225964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-201ENST00000225964 MYBBP1AQ9BQG0 1328 aaKnown RBP16.23■□□□□ 0.19
COL1A1-201ENST00000225964 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
COL1A1-201ENST00000225964 BECN2A8MW95 431 aa16.22■□□□□ 0.19
COL1A1-201ENST00000225964 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
COL1A1-201ENST00000225964 FYB1O15117 783 aa16.22■□□□□ 0.19
COL1A1-201ENST00000225964 RUFY2Q8WXA3 655 aa16.22■□□□□ 0.19
COL1A1-201ENST00000225964 ERICH2A1L162 156 aa16.22■□□□□ 0.19
COL1A1-201ENST00000225964 ATF3P18847 181 aa16.21■□□□□ 0.19
COL1A1-201ENST00000225964 PDE3BQ13370 1112 aa16.21■□□□□ 0.19
COL1A1-201ENST00000225964 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.19
COL1A1-201ENST00000225964 RAPGEF2Q9Y4G8 1499 aa16.21■□□□□ 0.18
COL1A1-201ENST00000225964 FOSBP53539 338 aa16.2■□□□□ 0.18
COL1A1-201ENST00000225964 CCDC70Q6NSX1 233 aa16.2■□□□□ 0.18
COL1A1-201ENST00000225964 DDX11L8A8MPP1 907 aa16.2■□□□□ 0.18
COL1A1-201ENST00000225964 TRDNQ13061 729 aa16.2■□□□□ 0.18
COL1A1-201ENST00000225964 CPLX1O14810 134 aa16.2■□□□□ 0.18
COL1A1-201ENST00000225964 ST20-MTHFSA0A0A6YYL1 179 aa16.19■□□□□ 0.18
COL1A1-201ENST00000225964 PATL2C9JE40 543 aaKnown RBP16.19■□□□□ 0.18
COL1A1-201ENST00000225964 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
COL1A1-201ENST00000225964 PLIN1O60240 522 aa16.19■□□□□ 0.18
COL1A1-201ENST00000225964 G3BP1Q13283 466 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL1A1-201ENST00000225964 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
COL1A1-201ENST00000225964 IPO9Q96P70 1041 aaKnown RBP16.18■□□□□ 0.18
COL1A1-201ENST00000225964 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
COL1A1-201ENST00000225964 DIAPH1O60610 1272 aaKnown RBP16.18■□□□□ 0.18
COL1A1-201ENST00000225964 E9PSI1 815 aa16.17■□□□□ 0.18
COL1A1-201ENST00000225964 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
COL1A1-201ENST00000225964 ANKRD20A12PQ8NF67 263 aa16.16■□□□□ 0.18
COL1A1-201ENST00000225964 MROH2BQ7Z745 1585 aa16.16■□□□□ 0.18
COL1A1-201ENST00000225964 DDX49Q9Y6V7 483 aaKnown RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 NUTM2GQ5VZR2 741 aa16.15■□□□□ 0.18
COL1A1-201ENST00000225964 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 RIPK4P57078 832 aa16.15■□□□□ 0.18
COL1A1-201ENST00000225964 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
COL1A1-201ENST00000225964 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
COL1A1-201ENST00000225964 SETQ01105 290 aaPredicted RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 RAPGEF4Q8WZA2 1011 aa16.15■□□□□ 0.18
COL1A1-201ENST00000225964 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
COL1A1-201ENST00000225964 ZNF592Q92610 1267 aa16.14■□□□□ 0.17
COL1A1-201ENST00000225964 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
COL1A1-201ENST00000225964 CRBNQ96SW2 442 aa16.14■□□□□ 0.17
COL1A1-201ENST00000225964 COG6Q9Y2V7 657 aa16.14■□□□□ 0.17
COL1A1-201ENST00000225964 WIZO95785 1651 aa16.13■□□□□ 0.17
COL1A1-201ENST00000225964 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL1A1-201ENST00000225964 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
COL1A1-201ENST00000225964 IPO7O95373 1038 aaKnown RBP16.12■□□□□ 0.17
COL1A1-201ENST00000225964 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
COL1A1-201ENST00000225964 FAM69CQ0P6D2 419 aa16.12■□□□□ 0.17
COL1A1-201ENST00000225964 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
COL1A1-201ENST00000225964 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
COL1A1-201ENST00000225964 PTPRGP23470 1445 aa16.12■□□□□ 0.17
COL1A1-201ENST00000225964 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
COL1A1-201ENST00000225964 KDM4AO75164 1064 aa16.11■□□□□ 0.17
COL1A1-201ENST00000225964 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
COL1A1-201ENST00000225964 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-201ENST00000225964 FAM161AQ3B820 660 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 HMOX1P09601 288 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 SLC4A3P48751 1232 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 NAP1L1P55209 391 aaKnown RBP16.1■□□□□ 0.17
COL1A1-201ENST00000225964 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 REC8O95072 547 aa16.1■□□□□ 0.17
COL1A1-201ENST00000225964 CT47A1Q5JQC4 288 aaPredicted RBP16.1■□□□□ 0.17
COL1A1-201ENST00000225964 ODF2Q5BJF6 829 aa16.09■□□□□ 0.17
COL1A1-201ENST00000225964 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
COL1A1-201ENST00000225964 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
COL1A1-201ENST00000225964 APAF1O14727 1248 aa16.08■□□□□ 0.17
COL1A1-201ENST00000225964 TMEM132AQ24JP5 1023 aa16.08■□□□□ 0.16
COL1A1-201ENST00000225964 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
COL1A1-201ENST00000225964 GPS2Q13227 327 aa16.08■□□□□ 0.16
COL1A1-201ENST00000225964 SAFBQ15424 915 aaKnown RBP eCLIP16.08■□□□□ 0.16
COL1A1-201ENST00000225964 EPS15P42566 896 aa16.07■□□□□ 0.16
COL1A1-201ENST00000225964 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-201ENST00000225964 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-201ENST00000225964 USP47Q96K76 1375 aa16.07■□□□□ 0.16
COL1A1-201ENST00000225964 EXOC6Q8TAG9 804 aa16.07■□□□□ 0.16
COL1A1-201ENST00000225964 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
COL1A1-201ENST00000225964 CCAR1Q8IX12 1150 aaKnown RBP16.06■□□□□ 0.16
COL1A1-201ENST00000225964 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
COL1A1-201ENST00000225964 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
COL1A1-201ENST00000225964 ERC2O15083 957 aa16.06■□□□□ 0.16
COL1A1-201ENST00000225964 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
COL1A1-201ENST00000225964 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms