RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
CNOT3-201ENST00000221232 TMEM132EQ6IEE7 984 aa19.28■□□□□ 0.68
CNOT3-201ENST00000221232 SCAF11Q99590 1463 aaKnown RBP19.28■□□□□ 0.68
CNOT3-201ENST00000221232 RTEL1-TNFRSF6BF6WH68 1400 aa19.28■□□□□ 0.68
CNOT3-201ENST00000221232 ADGRL1O94910 1474 aa19.28■□□□□ 0.68
CNOT3-201ENST00000221232 APAF1O14727 1248 aa19.27■□□□□ 0.68
CNOT3-201ENST00000221232 ZFYVE16Q7Z3T8 1539 aa19.27■□□□□ 0.68
CNOT3-201ENST00000221232 CARD14Q9BXL6 1004 aa19.27■□□□□ 0.68
CNOT3-201ENST00000221232 NPM1P06748 294 aaKnown RBP eCLIP19.26■□□□□ 0.67
CNOT3-201ENST00000221232 BLMP54132 1417 aaPredicted RBP19.26■□□□□ 0.67
CNOT3-201ENST00000221232 PTPRTO14522 1441 aa19.26■□□□□ 0.67
CNOT3-201ENST00000221232 CLTCL1P53675 1640 aa19.26■□□□□ 0.67
CNOT3-201ENST00000221232 PDE4AP27815 886 aa19.25■□□□□ 0.67
CNOT3-201ENST00000221232 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
CNOT3-201ENST00000221232 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
CNOT3-201ENST00000221232 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
CNOT3-201ENST00000221232 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
CNOT3-201ENST00000221232 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
CNOT3-201ENST00000221232 MADDQ8WXG6 1647 aa19.24■□□□□ 0.67
CNOT3-201ENST00000221232 NEUROD2Q15784 382 aa19.23■□□□□ 0.67
CNOT3-201ENST00000221232 TRPM2O94759 1503 aa19.23■□□□□ 0.67
CNOT3-201ENST00000221232 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
CNOT3-201ENST00000221232 ATP7AQ04656 1500 aa19.23■□□□□ 0.67
CNOT3-201ENST00000221232 LAMC1P11047 1609 aa19.22■□□□□ 0.67
CNOT3-201ENST00000221232 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
CNOT3-201ENST00000221232 TCERG1O14776 1098 aaKnown RBP19.21■□□□□ 0.67
CNOT3-201ENST00000221232 SLC12A5Q9H2X9 1139 aa19.21■□□□□ 0.67
CNOT3-201ENST00000221232 SAFB2Q14151 953 aaKnown RBP eCLIP19.2■□□□□ 0.66
CNOT3-201ENST00000221232 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
CNOT3-201ENST00000221232 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
CNOT3-201ENST00000221232 RAPGEF3O95398 923 aa19.18■□□□□ 0.66
CNOT3-201ENST00000221232 BCAR3O75815 825 aa19.18■□□□□ 0.66
CNOT3-201ENST00000221232 RRP7AQ9Y3A4 280 aaKnown RBP19.18■□□□□ 0.66
CNOT3-201ENST00000221232 RNF17Q9BXT8 1623 aaKnown RBP19.17■□□□□ 0.66
CNOT3-201ENST00000221232 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
CNOT3-201ENST00000221232 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
CNOT3-201ENST00000221232 NOS1P29475 1434 aa19.17■□□□□ 0.66
CNOT3-201ENST00000221232 SLFN5Q08AF3 891 aa19.16■□□□□ 0.66
CNOT3-201ENST00000221232 ZMYM4Q5VZL5 1548 aa19.16■□□□□ 0.66
CNOT3-201ENST00000221232 CFAP65Q6ZU64 1925 aaKnown RBP19.15■□□□□ 0.66
CNOT3-201ENST00000221232 BACH2Q9BYV9 841 aa19.15■□□□□ 0.66
CNOT3-201ENST00000221232 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
CNOT3-201ENST00000221232 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
CNOT3-201ENST00000221232 ZNF521Q96K83 1311 aa19.13■□□□□ 0.65
CNOT3-201ENST00000221232 IQGAP1P46940 1657 aa19.13■□□□□ 0.65
CNOT3-201ENST00000221232 LAS1LQ9Y4W2 734 aaKnown RBP19.12■□□□□ 0.65
CNOT3-201ENST00000221232 ERVK-7P63135 1459 aa19.12■□□□□ 0.65
CNOT3-201ENST00000221232 STK26Q9P289 416 aa19.12■□□□□ 0.65
CNOT3-201ENST00000221232 TET3O43151 1660 aa19.12■□□□□ 0.65
CNOT3-201ENST00000221232 RGS3P49796 1198 aa19.11■□□□□ 0.65
CNOT3-201ENST00000221232 CEP152O94986 1710 aa19.11■□□□□ 0.65
CNOT3-201ENST00000221232 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
CNOT3-201ENST00000221232 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
CNOT3-201ENST00000221232 INSRP06213 1382 aa19.09■□□□□ 0.65
CNOT3-201ENST00000221232 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-201ENST00000221232 ARAP3Q8WWN8 1544 aa19.09■□□□□ 0.65
CNOT3-201ENST00000221232 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-201ENST00000221232 CD109Q6YHK3 1445 aa19.09■□□□□ 0.65
CNOT3-201ENST00000221232 SYNMO15061 1565 aa19.08■□□□□ 0.65
CNOT3-201ENST00000221232 ABCA9Q8IUA7 1624 aa19.08■□□□□ 0.64
CNOT3-201ENST00000221232 PIK3C2GO75747 1445 aa19.08■□□□□ 0.64
CNOT3-201ENST00000221232 DEPDC5O75140 1603 aa19.08■□□□□ 0.64
CNOT3-201ENST00000221232 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
CNOT3-201ENST00000221232 MS4A1P11836 297 aa19.07■□□□□ 0.64
CNOT3-201ENST00000221232 FRAT1Q92837 279 aaPredicted RBP19.07■□□□□ 0.64
CNOT3-201ENST00000221232 CABP2Q9NPB3 220 aa19.07■□□□□ 0.64
CNOT3-201ENST00000221232 NSD3Q9BZ95 1437 aa19.06■□□□□ 0.64
CNOT3-201ENST00000221232 SLC4A3P48751 1232 aa19.06■□□□□ 0.64
CNOT3-201ENST00000221232 MROH1Q8NDA8 1641 aa19.06■□□□□ 0.64
CNOT3-201ENST00000221232 CANXP27824 592 aaKnown RBP19.06■□□□□ 0.64
CNOT3-201ENST00000221232 MTHFSP49914 203 aa19.06■□□□□ 0.64
CNOT3-201ENST00000221232 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
CNOT3-201ENST00000221232 ABCA6Q8N139 1617 aa19.05■□□□□ 0.64
CNOT3-201ENST00000221232 NPATQ14207 1427 aa19.05■□□□□ 0.64
CNOT3-201ENST00000221232 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
CNOT3-201ENST00000221232 MAP3K4Q9Y6R4 1608 aa19.04■□□□□ 0.64
CNOT3-201ENST00000221232 E9PSI1 815 aa19.04■□□□□ 0.64
CNOT3-201ENST00000221232 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
CNOT3-201ENST00000221232 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
CNOT3-201ENST00000221232 PANK1Q8TE04 598 aa19.03■□□□□ 0.64
CNOT3-201ENST00000221232 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
CNOT3-201ENST00000221232 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
CNOT3-201ENST00000221232 TRMT2AQ8IZ69 625 aaKnown RBP19.03■□□□□ 0.64
CNOT3-201ENST00000221232 KDM2BQ8NHM5 1336 aa19.02■□□□□ 0.64
CNOT3-201ENST00000221232 KIDINS220Q9ULH0 1771 aa19.02■□□□□ 0.64
CNOT3-201ENST00000221232 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.64
CNOT3-201ENST00000221232 COG6Q9Y2V7 657 aa19.02■□□□□ 0.64
CNOT3-201ENST00000221232 MYOM1P52179 1685 aa19.02■□□□□ 0.64
CNOT3-201ENST00000221232 PPRC1Q5VV67 1664 aaKnown RBP19.02■□□□□ 0.64
CNOT3-201ENST00000221232 EFCAB6Q5THR3 1501 aa19.02■□□□□ 0.63
CNOT3-201ENST00000221232 RTL5Q5HYW3 569 aaPredicted RBP19.02■□□□□ 0.63
CNOT3-201ENST00000221232 KDM5AP29375 1690 aaKnown RBP19.01■□□□□ 0.63
CNOT3-201ENST00000221232 TCP11L2Q8N4U5 519 aa19.01■□□□□ 0.63
CNOT3-201ENST00000221232 IDI1Q13907 227 aa19■□□□□ 0.63
CNOT3-201ENST00000221232 MYOM2P54296 1465 aa19■□□□□ 0.63
CNOT3-201ENST00000221232 MROH2AA6NES4 1674 aa18.99■□□□□ 0.63
CNOT3-201ENST00000221232 IGHDP01880 384 aa18.99■□□□□ 0.63
CNOT3-201ENST00000221232 U2AF1L5P0DN76 240 aaPredicted RBP18.98■□□□□ 0.63
CNOT3-201ENST00000221232 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
CNOT3-201ENST00000221232 U2AF1Q01081 240 aaKnown RBP eCLIP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms