RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
SCG3-201ENST00000220478 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SCG3-201ENST00000220478 RRP9O43818 475 aaKnown RBP10.26□□□□□ -0.77
SCG3-201ENST00000220478 SLC4A2P04920 1241 aa10.25□□□□□ -0.77
SCG3-201ENST00000220478 LAMC1P11047 1609 aa10.25□□□□□ -0.77
SCG3-201ENST00000220478 RTEL1-TNFRSF6BF6WH68 1400 aa10.25□□□□□ -0.77
SCG3-201ENST00000220478 COL17A1Q9UMD9 1497 aaPredicted RBP10.25□□□□□ -0.77
SCG3-201ENST00000220478 FOXD4L5Q5VV16 416 aaPredicted RBP10.24□□□□□ -0.77
SCG3-201ENST00000220478 FOXD4L4Q8WXT5 416 aaPredicted RBP10.24□□□□□ -0.77
SCG3-201ENST00000220478 CDC42BPAQ5VT25 1732 aa10.24□□□□□ -0.77
SCG3-201ENST00000220478 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
SCG3-201ENST00000220478 MYO5CQ9NQX4 1742 aa10.24□□□□□ -0.77
SCG3-201ENST00000220478 ITSN2Q9NZM3 1697 aa10.23□□□□□ -0.77
SCG3-201ENST00000220478 IGHDP01880 384 aa10.23□□□□□ -0.77
SCG3-201ENST00000220478 PRDM15P57071 1507 aaPredicted RBP10.23□□□□□ -0.77
SCG3-201ENST00000220478 ABCC10Q5T3U5 1492 aa10.23□□□□□ -0.77
SCG3-201ENST00000220478 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
SCG3-201ENST00000220478 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
SCG3-201ENST00000220478 EIF3AQ14152 1382 aaKnown RBP10.22□□□□□ -0.77
SCG3-201ENST00000220478 HSP90AA2PQ14568 343 aaPredicted RBP10.22□□□□□ -0.77
SCG3-201ENST00000220478 URB2Q14146 1524 aaKnown RBP10.22□□□□□ -0.77
SCG3-201ENST00000220478 TRMT2AQ8IZ69 625 aaKnown RBP10.22□□□□□ -0.77
SCG3-201ENST00000220478 ADCY10Q96PN6 1610 aa10.21□□□□□ -0.77
SCG3-201ENST00000220478 SHROOM2Q13796 1616 aa10.21□□□□□ -0.78
SCG3-201ENST00000220478 DISP3Q9P2K9 1392 aa10.21□□□□□ -0.78
SCG3-201ENST00000220478 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.78
SCG3-201ENST00000220478 PRDM4Q9UKN5 801 aa10.21□□□□□ -0.78
SCG3-201ENST00000220478 RGS3P49796 1198 aa10.2□□□□□ -0.78
SCG3-201ENST00000220478 CARD11Q9BXL7 1154 aa10.2□□□□□ -0.78
SCG3-201ENST00000220478 BCCIPQ9P287 314 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCG3-201ENST00000220478 IQGAP2Q13576 1575 aa10.2□□□□□ -0.78
SCG3-201ENST00000220478 L1TD1Q5T7N2 865 aaKnown RBP10.2□□□□□ -0.78
SCG3-201ENST00000220478 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
SCG3-201ENST00000220478 MYOM1P52179 1685 aa10.2□□□□□ -0.78
SCG3-201ENST00000220478 PBRM1Q86U86 1689 aa10.2□□□□□ -0.78
SCG3-201ENST00000220478 NUP153P49790 1475 aaKnown RBP10.19□□□□□ -0.78
SCG3-201ENST00000220478 PLXNC1O60486 1568 aa10.19□□□□□ -0.78
SCG3-201ENST00000220478 FGD1P98174 961 aa10.19□□□□□ -0.78
SCG3-201ENST00000220478 SLKQ9H2G2 1235 aaPredicted RBP10.19□□□□□ -0.78
SCG3-201ENST00000220478 PTPRGP23470 1445 aa10.19□□□□□ -0.78
SCG3-201ENST00000220478 PRAG1Q86YV5 1406 aa10.19□□□□□ -0.78
SCG3-201ENST00000220478 APBB1O00213 710 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 GLIPR1L2Q4G1C9 344 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
SCG3-201ENST00000220478 RNF17Q9BXT8 1623 aaKnown RBP10.18□□□□□ -0.78
SCG3-201ENST00000220478 ABCC2Q92887 1545 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 ADAMTS8Q9UP79 889 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
SCG3-201ENST00000220478 TESK2Q96S53 571 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 PNNQ9H307 717 aaKnown RBP10.18□□□□□ -0.78
SCG3-201ENST00000220478 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
SCG3-201ENST00000220478 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
SCG3-201ENST00000220478 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
SCG3-201ENST00000220478 CENPJQ9HC77 1338 aaPredicted RBP10.17□□□□□ -0.78
SCG3-201ENST00000220478 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
SCG3-201ENST00000220478 WDR7Q9Y4E6 1490 aa10.16□□□□□ -0.78
SCG3-201ENST00000220478 TDRD9Q8NDG6 1382 aaKnown RBP10.16□□□□□ -0.78
SCG3-201ENST00000220478 TBC1D32Q96NH3 1257 aa10.15□□□□□ -0.78
SCG3-201ENST00000220478 DDIT3P35638 169 aa10.15□□□□□ -0.78
SCG3-201ENST00000220478 SLFN5Q08AF3 891 aa10.15□□□□□ -0.78
SCG3-201ENST00000220478 NCOA3Q9Y6Q9 1424 aa10.15□□□□□ -0.78
SCG3-201ENST00000220478 GPATCH8Q9UKJ3 1502 aaKnown RBP10.15□□□□□ -0.79
SCG3-201ENST00000220478 GOLGA6L3A6NEY3 463 aa10.15□□□□□ -0.79
SCG3-201ENST00000220478 MCM4P33991 863 aa10.15□□□□□ -0.79
SCG3-201ENST00000220478 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.79
SCG3-201ENST00000220478 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
SCG3-201ENST00000220478 DMRT2Q9Y5R5 561 aa10.14□□□□□ -0.79
SCG3-201ENST00000220478 BCAR3O75815 825 aa10.14□□□□□ -0.79
SCG3-201ENST00000220478 DISP1Q96F81 1524 aa10.14□□□□□ -0.79
SCG3-201ENST00000220478 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
SCG3-201ENST00000220478 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
SCG3-201ENST00000220478 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 ECM2O94769 699 aaPredicted RBP10.13□□□□□ -0.79
SCG3-201ENST00000220478 GAS2L3Q86XJ1 694 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 IQGAP1P46940 1657 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 A2MP01023 1474 aa10.13□□□□□ -0.79
SCG3-201ENST00000220478 ANKRD50Q9ULJ7 1429 aa10.12□□□□□ -0.79
SCG3-201ENST00000220478 ESPNB1AK53 854 aa10.12□□□□□ -0.79
SCG3-201ENST00000220478 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
SCG3-201ENST00000220478 PLA2R1Q13018 1463 aa10.12□□□□□ -0.79
SCG3-201ENST00000220478 FAM177A1Q8N128 213 aaPredicted RBP10.12□□□□□ -0.79
SCG3-201ENST00000220478 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
SCG3-201ENST00000220478 CWC22Q9HCG8 908 aaKnown RBP10.12□□□□□ -0.79
SCG3-201ENST00000220478 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
SCG3-201ENST00000220478 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
SCG3-201ENST00000220478 GZF1Q9H116 711 aaPredicted RBP10.11□□□□□ -0.79
SCG3-201ENST00000220478 SHPRHQ149N8 1683 aa10.11□□□□□ -0.79
SCG3-201ENST00000220478 RIPK4P57078 832 aa10.11□□□□□ -0.79
SCG3-201ENST00000220478 PANK3Q9H999 370 aa10.11□□□□□ -0.79
SCG3-201ENST00000220478 GRPEL1Q9HAV7 217 aa10.1□□□□□ -0.79
SCG3-201ENST00000220478 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
SCG3-201ENST00000220478 ERBINQ96RT1 1412 aa10.1□□□□□ -0.79
SCG3-201ENST00000220478 RGL2O15211 777 aa10.1□□□□□ -0.79
SCG3-201ENST00000220478 SHANK2Q9UPX8 1470 aa10.1□□□□□ -0.79
SCG3-201ENST00000220478 A0A0U1RQG5 324 aaPredicted RBP10.09□□□□□ -0.79
SCG3-201ENST00000220478 TRAK2O60296 914 aa10.09□□□□□ -0.79
SCG3-201ENST00000220478 MRE11P49959 708 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms