RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TNNT3P45378 269 aaPredicted RBP13.64□□□□□ -0.23
KNOP1-201ENST00000219837 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
KNOP1-201ENST00000219837 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
KNOP1-201ENST00000219837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
KNOP1-201ENST00000219837 LRRFIP1Q32MZ4 808 aaKnown RBP13.63□□□□□ -0.23
KNOP1-201ENST00000219837 GOLGA6L19H0YKK7 550 aa13.62□□□□□ -0.23
KNOP1-201ENST00000219837 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
KNOP1-201ENST00000219837 CCAR2Q8N163 923 aaKnown RBP13.62□□□□□ -0.23
KNOP1-201ENST00000219837 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
KNOP1-201ENST00000219837 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
KNOP1-201ENST00000219837 TPM1P09493 284 aa13.61□□□□□ -0.23
KNOP1-201ENST00000219837 FYB1O15117 783 aa13.61□□□□□ -0.23
KNOP1-201ENST00000219837 FOSBP53539 338 aa13.61□□□□□ -0.23
KNOP1-201ENST00000219837 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
KNOP1-201ENST00000219837 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
KNOP1-201ENST00000219837 CYB5RLQ6IPT4 315 aa13.6□□□□□ -0.23
KNOP1-201ENST00000219837 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
KNOP1-201ENST00000219837 PLIN1O60240 522 aa13.6□□□□□ -0.23
KNOP1-201ENST00000219837 IPO9Q96P70 1041 aaKnown RBP13.6□□□□□ -0.23
KNOP1-201ENST00000219837 ERICH2A1L162 156 aa13.59□□□□□ -0.23
KNOP1-201ENST00000219837 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
KNOP1-201ENST00000219837 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
KNOP1-201ENST00000219837 JPH4Q96JJ6 628 aa13.59□□□□□ -0.23
KNOP1-201ENST00000219837 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.23
KNOP1-201ENST00000219837 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
KNOP1-201ENST00000219837 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
KNOP1-201ENST00000219837 RUFY2Q8WXA3 655 aa13.58□□□□□ -0.24
KNOP1-201ENST00000219837 CCDC43Q96MW1 224 aaKnown RBP13.58□□□□□ -0.24
KNOP1-201ENST00000219837 DDX58O95786 925 aaKnown RBP13.58□□□□□ -0.24
KNOP1-201ENST00000219837 CCDC70Q6NSX1 233 aa13.57□□□□□ -0.24
KNOP1-201ENST00000219837 ATF3P18847 181 aa13.57□□□□□ -0.24
KNOP1-201ENST00000219837 BECN2A8MW95 431 aa13.57□□□□□ -0.24
KNOP1-201ENST00000219837 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
KNOP1-201ENST00000219837 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
KNOP1-201ENST00000219837 E9PSI1 815 aa13.56□□□□□ -0.24
KNOP1-201ENST00000219837 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
KNOP1-201ENST00000219837 CRBNQ96SW2 442 aa13.56□□□□□ -0.24
KNOP1-201ENST00000219837 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
KNOP1-201ENST00000219837 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
KNOP1-201ENST00000219837 G3BP1Q13283 466 aaKnown RBP eCLIP13.55□□□□□ -0.24
KNOP1-201ENST00000219837 ATP6V1DQ9Y5K8 247 aa13.55□□□□□ -0.24
KNOP1-201ENST00000219837 TRDNQ13061 729 aa13.55□□□□□ -0.24
KNOP1-201ENST00000219837 ZNF592Q92610 1267 aa13.55□□□□□ -0.24
KNOP1-201ENST00000219837 CPLX1O14810 134 aa13.54□□□□□ -0.24
KNOP1-201ENST00000219837 RIPK4P57078 832 aa13.54□□□□□ -0.24
KNOP1-201ENST00000219837 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
KNOP1-201ENST00000219837 ROCK1Q13464 1354 aa13.54□□□□□ -0.24
KNOP1-201ENST00000219837 KDM4AO75164 1064 aa13.54□□□□□ -0.24
KNOP1-201ENST00000219837 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
KNOP1-201ENST00000219837 CPLX2Q6PUV4 134 aaKnown RBP13.53□□□□□ -0.24
KNOP1-201ENST00000219837 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
KNOP1-201ENST00000219837 HOOK1Q9UJC3 728 aaKnown RBP13.53□□□□□ -0.24
KNOP1-201ENST00000219837 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
KNOP1-201ENST00000219837 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
KNOP1-201ENST00000219837 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.53□□□□□ -0.24
KNOP1-201ENST00000219837 MTMR7Q9Y216 660 aa13.52□□□□□ -0.24
KNOP1-201ENST00000219837 DDX49Q9Y6V7 483 aaKnown RBP13.52□□□□□ -0.24
KNOP1-201ENST00000219837 PTPRGP23470 1445 aa13.52□□□□□ -0.24
KNOP1-201ENST00000219837 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■■■■■ 75.2
KNOP1-201ENST00000219837 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
KNOP1-201ENST00000219837 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
KNOP1-201ENST00000219837 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
KNOP1-201ENST00000219837 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
KNOP1-201ENST00000219837 ANKRD20A12PQ8NF67 263 aa13.52□□□□□ -0.25
KNOP1-201ENST00000219837 FKBP5Q13451 457 aaPredicted RBP13.51□□□□□ -0.25
KNOP1-201ENST00000219837 USP47Q96K76 1375 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 HMOX1P09601 288 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
KNOP1-201ENST00000219837 FAM69CQ0P6D2 419 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 NEUROD6Q96NK8 337 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 NAP1L1P55209 391 aaKnown RBP13.5□□□□□ -0.25
KNOP1-201ENST00000219837 RNF20Q5VTR2 975 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
KNOP1-201ENST00000219837 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
KNOP1-201ENST00000219837 EXOC6Q8TAG9 804 aa13.49□□□□□ -0.25
KNOP1-201ENST00000219837 RAPGEF4Q8WZA2 1011 aa13.49□□□□□ -0.25
KNOP1-201ENST00000219837 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
KNOP1-201ENST00000219837 WASHC4Q2M389 1173 aa13.49□□□□□ -0.25
KNOP1-201ENST00000219837 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
KNOP1-201ENST00000219837 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
KNOP1-201ENST00000219837 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
KNOP1-201ENST00000219837 IKQ13123 557 aaPredicted RBP13.48□□□□□ -0.25
KNOP1-201ENST00000219837 EPS15P42566 896 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 OSCARQ8IYS5 282 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 REC8O95072 547 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 TMEM132AQ24JP5 1023 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 APAF1O14727 1248 aa13.47□□□□□ -0.25
KNOP1-201ENST00000219837 GPS2Q13227 327 aa13.46□□□□□ -0.25
KNOP1-201ENST00000219837 IPO7O95373 1038 aaKnown RBP13.46□□□□□ -0.25
KNOP1-201ENST00000219837 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
KNOP1-201ENST00000219837 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
KNOP1-201ENST00000219837 ODF2Q5BJF6 829 aa13.46□□□□□ -0.25
KNOP1-201ENST00000219837 CT47A1Q5JQC4 288 aaPredicted RBP13.46□□□□□ -0.25
KNOP1-201ENST00000219837 API5Q9BZZ5 524 aaKnown RBP13.46□□□□□ -0.25
KNOP1-201ENST00000219837 PPP1R1BQ9UD71 204 aaPredicted RBP13.46□□□□□ -0.25
KNOP1-201ENST00000219837 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 ERC2O15083 957 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 MIA2Q96PC5 1412 aa13.45□□□□□ -0.26
KNOP1-201ENST00000219837 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms