RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
SPTLC2-201ENST00000216484 ERICH2A1L162 156 aa17.73■□□□□ 0.43
SPTLC2-201ENST00000216484 MSH5O43196 834 aa17.72■□□□□ 0.43
SPTLC2-201ENST00000216484 TRDNQ13061 729 aa17.71■□□□□ 0.43
SPTLC2-201ENST00000216484 OLFM4Q6UX06 510 aa17.71■□□□□ 0.43
SPTLC2-201ENST00000216484 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
SPTLC2-201ENST00000216484 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
SPTLC2-201ENST00000216484 CT47B1P0C2W7 299 aaPredicted RBP17.71■□□□□ 0.43
SPTLC2-201ENST00000216484 TRHP20396 242 aaPredicted RBP17.71■□□□□ 0.42
SPTLC2-201ENST00000216484 GOLGA6L10A6NI86 522 aa17.7■□□□□ 0.42
SPTLC2-201ENST00000216484 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
SPTLC2-201ENST00000216484 TMEM132AQ24JP5 1023 aa17.69■□□□□ 0.42
SPTLC2-201ENST00000216484 CCER2I3L3R5 266 aa17.69■□□□□ 0.42
SPTLC2-201ENST00000216484 KIAA0754O94854 1291 aa17.69■□□□□ 0.42
SPTLC2-201ENST00000216484 ZKSCAN1P17029 563 aaPredicted RBP17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 GOLGA6L7A0A1B0GV03 622 aa17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 WWC2Q6AWC2 1192 aa17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 INCENPQ9NQS7 918 aa17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 AMPHP49418 695 aa17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 NGEFQ8N5V2 710 aa17.68■□□□□ 0.42
SPTLC2-201ENST00000216484 RUFY2Q8WXA3 655 aa17.67■□□□□ 0.42
SPTLC2-201ENST00000216484 CCDC97Q96F63 343 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-201ENST00000216484 ERLIN2O94905 339 aa17.67■□□□□ 0.42
SPTLC2-201ENST00000216484 VPS37CA5D8V6 355 aaPredicted RBP17.67■□□□□ 0.42
SPTLC2-201ENST00000216484 ANKRD18AQ8IVF6 992 aa17.67■□□□□ 0.42
SPTLC2-201ENST00000216484 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
SPTLC2-201ENST00000216484 SYCP1Q15431 976 aa17.66■□□□□ 0.42
SPTLC2-201ENST00000216484 LMOD3Q0VAK6 560 aa17.66■□□□□ 0.42
SPTLC2-201ENST00000216484 MTERF4Q7Z6M4 381 aaKnown RBP17.65■□□□□ 0.42
SPTLC2-201ENST00000216484 CENPHQ9H3R5 247 aa17.65■□□□□ 0.42
SPTLC2-201ENST00000216484 RALBP1Q15311 655 aa17.64■□□□□ 0.41
SPTLC2-201ENST00000216484 GOLGA3Q08378 1498 aa17.64■□□□□ 0.41
SPTLC2-201ENST00000216484 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
SPTLC2-201ENST00000216484 REC8O95072 547 aa17.63■□□□□ 0.41
SPTLC2-201ENST00000216484 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
SPTLC2-201ENST00000216484 NF2P35240 595 aa17.63■□□□□ 0.41
SPTLC2-201ENST00000216484 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
SPTLC2-201ENST00000216484 CCDC73Q6ZRK6 1079 aa17.63■□□□□ 0.41
SPTLC2-201ENST00000216484 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
SPTLC2-201ENST00000216484 RNF20Q5VTR2 975 aa17.62■□□□□ 0.41
SPTLC2-201ENST00000216484 GBP2P32456 591 aaPredicted RBP17.62■□□□□ 0.41
SPTLC2-201ENST00000216484 TSHZ2Q9NRE2 1034 aa17.62■□□□□ 0.41
SPTLC2-201ENST00000216484 EZRP15311 586 aaKnown RBP17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 TAX1BP1Q86VP1 789 aa17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 TAF3Q5VWG9 929 aa17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 SMC3Q9UQE7 1217 aa17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
SPTLC2-201ENST00000216484 MAPK8IP2Q13387 824 aaPredicted RBP17.6■□□□□ 0.41
SPTLC2-201ENST00000216484 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
SPTLC2-201ENST00000216484 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
SPTLC2-201ENST00000216484 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
SPTLC2-201ENST00000216484 SMC2O95347 1197 aa17.6■□□□□ 0.41
SPTLC2-201ENST00000216484 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 NGDNQ8NEJ9 315 aaKnown RBP17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 FYB1O15117 783 aa17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 EVA1CP58658 441 aa17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 CCDC39Q9UFE4 941 aa17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 PKNOX2Q96KN3 472 aa17.59■□□□□ 0.41
SPTLC2-201ENST00000216484 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
SPTLC2-201ENST00000216484 BCL2L13Q9BXK5 485 aa17.58■□□□□ 0.41
SPTLC2-201ENST00000216484 IKQ13123 557 aaPredicted RBP17.58■□□□□ 0.41
SPTLC2-201ENST00000216484 MAGEC2Q9UBF1 373 aaPredicted RBP17.58■□□□□ 0.41
SPTLC2-201ENST00000216484 IFIT2P09913 472 aaKnown RBP17.58■□□□□ 0.4
SPTLC2-201ENST00000216484 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
SPTLC2-201ENST00000216484 GOLGA6L10A0A0M3HER8 536 aa17.57■□□□□ 0.4
SPTLC2-201ENST00000216484 TERF2IPQ9NYB0 399 aa17.57■□□□□ 0.4
SPTLC2-201ENST00000216484 KDM4AO75164 1064 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 RRP7AQ9Y3A4 280 aaKnown RBP17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 CCNB3Q8WWL7 1395 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 GIMAP7Q8NHV1 300 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 GGT6Q6P531 493 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
SPTLC2-201ENST00000216484 TRIM5Q9C035 493 aa17.55■□□□□ 0.4
SPTLC2-201ENST00000216484 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
SPTLC2-201ENST00000216484 DEF6Q9H4E7 631 aa17.55■□□□□ 0.4
SPTLC2-201ENST00000216484 XBP1P17861 261 aa17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 CDK5RAP3Q96JB5 506 aa17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 FOXD1Q16676 465 aa17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 PDE4AP27815 886 aa17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 FAM193AP78312 1265 aa17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 BCCIPQ9P287 314 aaKnown RBP eCLIP17.54■□□□□ 0.4
SPTLC2-201ENST00000216484 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 NECTIN2Q92692 538 aa17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 RBM10P98175 930 aaKnown RBP17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 RALYLQ86SE5 291 aaKnown RBP17.53■□□□□ 0.4
SPTLC2-201ENST00000216484 CCDC181Q5TID7 509 aa17.52■□□□□ 0.4
SPTLC2-201ENST00000216484 CCP110O43303 1012 aa17.52■□□□□ 0.4
SPTLC2-201ENST00000216484 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.39
SPTLC2-201ENST00000216484 KLHL34Q8N239 644 aa17.52■□□□□ 0.39
SPTLC2-201ENST00000216484 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.39
SPTLC2-201ENST00000216484 SPC24Q8NBT2 197 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms